RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 NRIP1P48552 1158 aa17.14■□□□□ 0.33
LTBP3-210ENST00000528516 HNRNPA0Q13151 305 aaKnown RBP17.14■□□□□ 0.33
LTBP3-210ENST00000528516 SLC14A2Q15849 920 aa17.14■□□□□ 0.33
LTBP3-210ENST00000528516 KIAA1324Q6UXG2 1013 aaKnown RBP17.14■□□□□ 0.33
LTBP3-210ENST00000528516 SDHCQ99643 169 aaPredicted RBP17.14■□□□□ 0.33
LTBP3-210ENST00000528516 HEBP1Q9NRV9 189 aa17.14■□□□□ 0.33
LTBP3-210ENST00000528516 ZCCHC3Q9NUD5 404 aaKnown RBP17.14■□□□□ 0.33
LTBP3-210ENST00000528516 CXXC1Q9P0U4 656 aaPredicted RBP17.14■□□□□ 0.33
LTBP3-210ENST00000528516 NDOR1Q9UHB4 597 aa17.14■□□□□ 0.33
LTBP3-210ENST00000528516 ING4Q9UNL4 249 aa17.14■□□□□ 0.33
LTBP3-210ENST00000528516 CIB4A0PJX0 185 aa17.14■□□□□ 0.33
LTBP3-210ENST00000528516 FADS2P1A8MWK0 482 aa17.14■□□□□ 0.33
LTBP3-210ENST00000528516 MRPS14O60783 128 aaKnown RBP17.14■□□□□ 0.33
LTBP3-210ENST00000528516 PRR35P0CG20 571 aa17.14■□□□□ 0.33
LTBP3-210ENST00000528516 CD70P32970 193 aa17.14■□□□□ 0.33
LTBP3-210ENST00000528516 RPS19P39019 145 aaKnown RBP17.14■□□□□ 0.33
LTBP3-210ENST00000528516 CTSOP43234 321 aaPredicted RBP17.14■□□□□ 0.33
LTBP3-210ENST00000528516 MAGEA11P43364 429 aa17.14■□□□□ 0.33
LTBP3-210ENST00000528516 ARMC6Q6NXE6 501 aa17.14■□□□□ 0.33
LTBP3-210ENST00000528516 NOXRED1Q6NXP6 359 aa17.14■□□□□ 0.33
LTBP3-210ENST00000528516 ALKAL1Q6UXT8 129 aa17.14■□□□□ 0.33
LTBP3-210ENST00000528516 THOC6Q86W42 341 aaKnown RBP17.14■□□□□ 0.33
LTBP3-210ENST00000528516 CHST14Q8NCH0 376 aa17.14■□□□□ 0.33
LTBP3-210ENST00000528516 CD200R1Q8TD46 325 aa17.14■□□□□ 0.33
LTBP3-210ENST00000528516 TTTY10Q9BZA0 68 aa17.14■□□□□ 0.33
LTBP3-210ENST00000528516 ACTL8Q9H568 366 aa17.14■□□□□ 0.33
LTBP3-210ENST00000528516 GPRC5BQ9NZH0 403 aa17.14■□□□□ 0.33
LTBP3-210ENST00000528516 SLC23A1Q9UHI7 598 aa17.14■□□□□ 0.33
LTBP3-210ENST00000528516 A0A1W2PQ45 241 aaPredicted RBP17.13■□□□□ 0.33
LTBP3-210ENST00000528516 A0A1W2PQY0 241 aa17.13■□□□□ 0.33
LTBP3-210ENST00000528516 SLC2A2P11168 524 aaPredicted RBP17.13■□□□□ 0.33
LTBP3-210ENST00000528516 ACP5P13686 325 aa17.13■□□□□ 0.33
LTBP3-210ENST00000528516 BPIP17213 487 aa17.13■□□□□ 0.33
LTBP3-210ENST00000528516 ACVR2AP27037 513 aa17.13■□□□□ 0.33
LTBP3-210ENST00000528516 NTSP30990 170 aa17.13■□□□□ 0.33
LTBP3-210ENST00000528516 MLLT3P42568 568 aaPredicted RBP17.13■□□□□ 0.33
LTBP3-210ENST00000528516 MAP2K3P46734 347 aa17.13■□□□□ 0.33
LTBP3-210ENST00000528516 SEC13P55735 322 aa17.13■□□□□ 0.33
LTBP3-210ENST00000528516 NTHL1P78549 312 aa17.13■□□□□ 0.33
LTBP3-210ENST00000528516 LMAN2Q12907 356 aa17.13■□□□□ 0.33
LTBP3-210ENST00000528516 FAM122CQ6P4D5 195 aa17.13■□□□□ 0.33
LTBP3-210ENST00000528516 XKRXQ6PP77 449 aa17.13■□□□□ 0.33
LTBP3-210ENST00000528516 USP7Q93009 1102 aa17.13■□□□□ 0.33
LTBP3-210ENST00000528516 APIPQ96GX9 242 aa17.13■□□□□ 0.33
LTBP3-210ENST00000528516 CRELD1Q96HD1 420 aa17.13■□□□□ 0.33
LTBP3-210ENST00000528516 CCM2Q9BSQ5 444 aa17.13■□□□□ 0.33
LTBP3-210ENST00000528516 POLR2J2Q9GZM3 115 aaKnown RBP17.13■□□□□ 0.33
LTBP3-210ENST00000528516 RUVBL1Q9Y265 456 aaKnown RBP17.13■□□□□ 0.33
LTBP3-210ENST00000528516 PCDHGA6Q9Y5G7 932 aa17.13■□□□□ 0.33
LTBP3-210ENST00000528516 LEUTXA8MZ59 168 aa17.13■□□□□ 0.33
LTBP3-210ENST00000528516 BCHEP06276 602 aa17.13■□□□□ 0.33
LTBP3-210ENST00000528516 TAS2R41P59536 307 aa17.13■□□□□ 0.33
LTBP3-210ENST00000528516 RAB8AP61006 207 aa17.13■□□□□ 0.33
LTBP3-210ENST00000528516 MLLT1Q03111 559 aaPredicted RBP17.13■□□□□ 0.33
LTBP3-210ENST00000528516 IL18Q14116 193 aa17.13■□□□□ 0.33
LTBP3-210ENST00000528516 ATG9BQ674R7 924 aa17.13■□□□□ 0.33
LTBP3-210ENST00000528516 CCDC71Q8IV32 467 aaPredicted RBP17.13■□□□□ 0.33
LTBP3-210ENST00000528516 ZNF431Q8TF32 576 aaPredicted RBP17.13■□□□□ 0.33
LTBP3-210ENST00000528516 PLD4Q96BZ4 506 aa17.13■□□□□ 0.33
LTBP3-210ENST00000528516 ZNF382Q96SR6 550 aa17.13■□□□□ 0.33
LTBP3-210ENST00000528516 RTP3Q9BQQ7 232 aa17.13■□□□□ 0.33
LTBP3-210ENST00000528516 SPRTNQ9H040 489 aaPredicted RBP17.13■□□□□ 0.33
LTBP3-210ENST00000528516 EVA1BQ9NVM1 165 aa17.13■□□□□ 0.33
LTBP3-210ENST00000528516 A0A1W2PQL4 384 aaPredicted RBP17.13■□□□□ 0.33
LTBP3-210ENST00000528516 NUPL2O15504 423 aaKnown RBP17.13■□□□□ 0.33
LTBP3-210ENST00000528516 TRAPPC2P0DI81 140 aa17.13■□□□□ 0.33
LTBP3-210ENST00000528516 TRAPPC2BP0DI82 140 aa17.13■□□□□ 0.33
LTBP3-210ENST00000528516 POU3F3P20264 500 aaPredicted RBP17.13■□□□□ 0.33
LTBP3-210ENST00000528516 PRPS1L1P21108 318 aa17.13■□□□□ 0.33
LTBP3-210ENST00000528516 SGSHP51688 502 aa17.13■□□□□ 0.33
LTBP3-210ENST00000528516 ATP12AP54707 1039 aa17.13■□□□□ 0.33
LTBP3-210ENST00000528516 ZNF33AQ06730 810 aa17.13■□□□□ 0.33
LTBP3-210ENST00000528516 ANXA8L1Q5VT79 327 aa17.13■□□□□ 0.33
LTBP3-210ENST00000528516 LUZP2Q86TE4 346 aa17.13■□□□□ 0.33
LTBP3-210ENST00000528516 FBXL6Q8N531 539 aa17.13■□□□□ 0.33
LTBP3-210ENST00000528516 DNAJA3Q96EY1 480 aa17.13■□□□□ 0.33
LTBP3-210ENST00000528516 PDLIM5Q96HC4 596 aaKnown RBP17.13■□□□□ 0.33
LTBP3-210ENST00000528516 SLC6A13Q9NSD5 602 aa17.13■□□□□ 0.33
LTBP3-210ENST00000528516 TAC3Q9UHF0 121 aa17.13■□□□□ 0.33
LTBP3-210ENST00000528516 STX16O14662 325 aa17.12■□□□□ 0.33
LTBP3-210ENST00000528516 PRAMEF12O95522 483 aa17.12■□□□□ 0.33
LTBP3-210ENST00000528516 ATP1B2P14415 290 aaPredicted RBP17.12■□□□□ 0.33
LTBP3-210ENST00000528516 TACR1P25103 407 aa17.12■□□□□ 0.33
LTBP3-210ENST00000528516 ARL4DP49703 201 aa17.12■□□□□ 0.33
LTBP3-210ENST00000528516 ABHD18Q0P651 414 aa17.12■□□□□ 0.33
LTBP3-210ENST00000528516 DBPQ10586 325 aaPredicted RBP17.12■□□□□ 0.33
LTBP3-210ENST00000528516 MTAPQ13126 283 aa17.12■□□□□ 0.33
LTBP3-210ENST00000528516 GLRX5Q86SX6 157 aa17.12■□□□□ 0.33
LTBP3-210ENST00000528516 LRRC17Q8N6Y2 441 aa17.12■□□□□ 0.33
LTBP3-210ENST00000528516 C12orf76Q8N812 135 aaPredicted RBP17.12■□□□□ 0.33
LTBP3-210ENST00000528516 OR6C4Q8NGE1 309 aa17.12■□□□□ 0.33
LTBP3-210ENST00000528516 XKR8Q9H6D3 395 aa17.12■□□□□ 0.33
LTBP3-210ENST00000528516 DLGAP4Q9Y2H0 992 aa17.12■□□□□ 0.33
LTBP3-210ENST00000528516 TEX51A0A1B0GUA7 166 aa17.12■□□□□ 0.33
LTBP3-210ENST00000528516 NR2F6P10588 404 aa17.12■□□□□ 0.33
LTBP3-210ENST00000528516 TYRP14679 529 aa17.12■□□□□ 0.33
LTBP3-210ENST00000528516 HOXA9P31269 272 aa17.12■□□□□ 0.33
LTBP3-210ENST00000528516 AVPR1BP47901 424 aa17.12■□□□□ 0.33
LTBP3-210ENST00000528516 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.12■□□□□ 0.33
LTBP3-210ENST00000528516 LYPLAL1Q5VWZ2 237 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms