RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 TACR1P25103 407 aa10.67□□□□□ -0.7
CMTM1-211ENST00000528484 CXCR5P32302 372 aa10.67□□□□□ -0.7
CMTM1-211ENST00000528484 NR0B1P51843 470 aaKnown RBP10.67□□□□□ -0.7
CMTM1-211ENST00000528484 LIM2P55344 173 aa10.67□□□□□ -0.7
CMTM1-211ENST00000528484 TIAL1Q01085 375 aaKnown RBP eCLIP10.67□□□□□ -0.7
CMTM1-211ENST00000528484 MPEG1Q2M385 716 aa10.67□□□□□ -0.7
CMTM1-211ENST00000528484 CLEC9AQ6UXN8 241 aa10.67□□□□□ -0.7
CMTM1-211ENST00000528484 ADAMTSL2Q86TH1 951 aa10.67□□□□□ -0.7
CMTM1-211ENST00000528484 LACC1Q8IV20 430 aa10.67□□□□□ -0.7
CMTM1-211ENST00000528484 CNTN4Q8IWV2 1026 aa10.67□□□□□ -0.7
CMTM1-211ENST00000528484 PM20D2Q8IYS1 436 aa10.67□□□□□ -0.7
CMTM1-211ENST00000528484 ULK2Q8IYT8 1036 aa10.67□□□□□ -0.7
CMTM1-211ENST00000528484 NKAPQ8N5F7 415 aaKnown RBP10.67□□□□□ -0.7
CMTM1-211ENST00000528484 SRFBP1Q8NEF9 429 aaKnown RBP10.67□□□□□ -0.7
CMTM1-211ENST00000528484 HSPBAP1Q96EW2 488 aa10.67□□□□□ -0.7
CMTM1-211ENST00000528484 CERS2Q96G23 380 aa10.67□□□□□ -0.7
CMTM1-211ENST00000528484 PDLIM5Q96HC4 596 aaKnown RBP10.67□□□□□ -0.7
CMTM1-211ENST00000528484 ART5Q96L15 291 aa10.67□□□□□ -0.7
CMTM1-211ENST00000528484 SIGLEC10Q96LC7 697 aa10.67□□□□□ -0.7
CMTM1-211ENST00000528484 JSRP1Q96MG2 331 aaPredicted RBP10.67□□□□□ -0.7
CMTM1-211ENST00000528484 CNPPD1Q9BV87 410 aa10.67□□□□□ -0.7
CMTM1-211ENST00000528484 ZFP64Q9NPA5 681 aa10.67□□□□□ -0.7
CMTM1-211ENST00000528484 QPCTLQ9NXS2 382 aa10.67□□□□□ -0.7
CMTM1-211ENST00000528484 CBLCQ9ULV8 474 aa10.67□□□□□ -0.7
CMTM1-211ENST00000528484 DAPP1Q9UN19 280 aa10.67□□□□□ -0.7
CMTM1-211ENST00000528484 AHRRA9YTQ3 701 aa10.66□□□□□ -0.7
CMTM1-211ENST00000528484 C4orf51C9J302 202 aa10.66□□□□□ -0.7
CMTM1-211ENST00000528484 TGFBR3LH3BV60 316 aa10.66□□□□□ -0.7
CMTM1-211ENST00000528484 CLGNO14967 610 aa10.66□□□□□ -0.7
CMTM1-211ENST00000528484 ARHGEF9O43307 516 aa10.66□□□□□ -0.7
CMTM1-211ENST00000528484 CELA3AP09093 270 aa10.66□□□□□ -0.7
CMTM1-211ENST00000528484 INHBBP09529 407 aa10.66□□□□□ -0.7
CMTM1-211ENST00000528484 EPXP11678 715 aa10.66□□□□□ -0.7
CMTM1-211ENST00000528484 CERS1P27544 350 aa10.66□□□□□ -0.7
CMTM1-211ENST00000528484 HNRNPH1P31943 449 aaKnown RBP10.66□□□□□ -0.7
CMTM1-211ENST00000528484 MSH2P43246 934 aa10.66□□□□□ -0.7
CMTM1-211ENST00000528484 RPL21P46778 160 aaKnown RBP10.66□□□□□ -0.7
CMTM1-211ENST00000528484 KCNC1P48547 511 aa10.66□□□□□ -0.7
CMTM1-211ENST00000528484 HNRNPFP52597 415 aaKnown RBP10.66□□□□□ -0.7
CMTM1-211ENST00000528484 CDKL1Q00532 357 aa10.66□□□□□ -0.7
CMTM1-211ENST00000528484 FOXO1Q12778 655 aa10.66□□□□□ -0.7
CMTM1-211ENST00000528484 ASPHQ12797 758 aa10.66□□□□□ -0.7
CMTM1-211ENST00000528484 BIKQ13323 160 aa10.66□□□□□ -0.7
CMTM1-211ENST00000528484 DAZAP2Q15038 168 aaPredicted RBP10.66□□□□□ -0.7
CMTM1-211ENST00000528484 PPP1R7Q15435 360 aa10.66□□□□□ -0.7
CMTM1-211ENST00000528484 KCTD19Q17RG1 926 aaPredicted RBP10.66□□□□□ -0.7
CMTM1-211ENST00000528484 FBXL19-AS1Q494R0 122 aa10.66□□□□□ -0.7
CMTM1-211ENST00000528484 CCDC137Q6PK04 289 aaKnown RBP10.66□□□□□ -0.7
CMTM1-211ENST00000528484 SBSNQ6UWP8 590 aa10.66□□□□□ -0.7
CMTM1-211ENST00000528484 SLC15A4Q8N697 577 aa10.66□□□□□ -0.7
CMTM1-211ENST00000528484 NAT8LQ8N9F0 302 aa10.66□□□□□ -0.7
CMTM1-211ENST00000528484 SPC24Q8NBT2 197 aa10.66□□□□□ -0.7
CMTM1-211ENST00000528484 FAM13CQ8NE31 585 aa10.66□□□□□ -0.7
CMTM1-211ENST00000528484 NEIL3Q8TAT5 605 aa10.66□□□□□ -0.7
CMTM1-211ENST00000528484 NUBPLQ8TB37 319 aa10.66□□□□□ -0.7
CMTM1-211ENST00000528484 PTPMT1Q8WUK0 201 aaPredicted RBP10.66□□□□□ -0.7
CMTM1-211ENST00000528484 ANKRD7Q92527 254 aa10.66□□□□□ -0.7
CMTM1-211ENST00000528484 DGAT2Q96PD7 388 aa10.66□□□□□ -0.7
CMTM1-211ENST00000528484 KCNC2Q96PR1 638 aa10.66□□□□□ -0.7
CMTM1-211ENST00000528484 ZNF703Q9H7S9 590 aaPredicted RBP10.66□□□□□ -0.7
CMTM1-211ENST00000528484 ZNF395Q9H8N7 513 aaPredicted RBP10.66□□□□□ -0.7
CMTM1-211ENST00000528484 CNOT10Q9H9A5 744 aaKnown RBP10.66□□□□□ -0.7
CMTM1-211ENST00000528484 LYRM4Q9HD34 91 aa10.66□□□□□ -0.7
CMTM1-211ENST00000528484 ACKR4Q9NPB9 350 aa10.66□□□□□ -0.7
CMTM1-211ENST00000528484 LZTFL1Q9NQ48 299 aa10.66□□□□□ -0.7
CMTM1-211ENST00000528484 CNIH4Q9P003 139 aa10.66□□□□□ -0.7
CMTM1-211ENST00000528484 SPRR3Q9UBC9 169 aa10.66□□□□□ -0.7
CMTM1-211ENST00000528484 EML6Q6ZMW3 1958 aa10.66□□□□□ -0.7
CMTM1-211ENST00000528484 MPDZO75970 2070 aa10.65□□□□□ -0.7
CMTM1-211ENST00000528484 NSD1Q96L73 2696 aaPredicted RBP10.65□□□□□ -0.7
CMTM1-211ENST00000528484 GOLGA6L10A0A0M3HER8 536 aa10.65□□□□□ -0.7
CMTM1-211ENST00000528484 CTAGE15A4D2H0 777 aa10.65□□□□□ -0.7
CMTM1-211ENST00000528484 CAPN14A8MX76 684 aa10.65□□□□□ -0.7
CMTM1-211ENST00000528484 EEF1E1-BLOC1S5C9J1V9 151 aa10.65□□□□□ -0.7
CMTM1-211ENST00000528484 CYR61O00622 381 aa10.65□□□□□ -0.7
CMTM1-211ENST00000528484 EEF1E1O43324 174 aaKnown RBP10.65□□□□□ -0.7
CMTM1-211ENST00000528484 ATE1O95260 518 aa10.65□□□□□ -0.7
CMTM1-211ENST00000528484 GDF1P27539 372 aa10.65□□□□□ -0.7
CMTM1-211ENST00000528484 GABRB3P28472 473 aa10.65□□□□□ -0.7
CMTM1-211ENST00000528484 SERPINB3P29508 390 aa10.65□□□□□ -0.7
CMTM1-211ENST00000528484 TIMP3P35625 211 aa10.65□□□□□ -0.7
CMTM1-211ENST00000528484 PIGAP37287 484 aa10.65□□□□□ -0.7
CMTM1-211ENST00000528484 SORDQ00796 357 aa10.65□□□□□ -0.7
CMTM1-211ENST00000528484 PLIN5Q00G26 463 aa10.65□□□□□ -0.7
CMTM1-211ENST00000528484 PCBP2Q15366 365 aaKnown RBP eCLIP10.65□□□□□ -0.79e-7■■■■□ 24.1
CMTM1-211ENST00000528484 HIST2H2ACQ16777 129 aaPredicted RBP10.65□□□□□ -0.7
CMTM1-211ENST00000528484 PPP1R3AQ16821 1122 aa10.65□□□□□ -0.7
CMTM1-211ENST00000528484 PIGGQ5H8A4 983 aa10.65□□□□□ -0.7
CMTM1-211ENST00000528484 PAGE2BQ5JRK9 111 aa10.65□□□□□ -0.7
CMTM1-211ENST00000528484 TBCELQ5QJ74 424 aa10.65□□□□□ -0.7
CMTM1-211ENST00000528484 PRAMEF20Q5VT98 475 aa10.65□□□□□ -0.7
CMTM1-211ENST00000528484 SHEQ5VZ18 495 aa10.65□□□□□ -0.7
CMTM1-211ENST00000528484 TMEM198Q66K66 360 aa10.65□□□□□ -0.7
CMTM1-211ENST00000528484 HIST2H2AA3Q6FI13 130 aa10.65□□□□□ -0.7
CMTM1-211ENST00000528484 ABHD17CQ6PCB6 329 aa10.65□□□□□ -0.7
CMTM1-211ENST00000528484 Q71RC1 249 aaPredicted RBP10.65□□□□□ -0.7
CMTM1-211ENST00000528484 SLC29A4Q7RTT9 530 aa10.65□□□□□ -0.7
CMTM1-211ENST00000528484 CTAGE6Q86UF2 777 aa10.65□□□□□ -0.7
CMTM1-211ENST00000528484 TCAIMQ8N3R3 496 aa10.65□□□□□ -0.7
CMTM1-211ENST00000528484 RELL2Q8NC24 303 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms