RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 KLRF1Q9NZS2 232 aa14.38□□□□□ -0.11
USP47-207ENST00000527733 SSR3Q9UNL2 185 aa14.38□□□□□ -0.11
USP47-207ENST00000527733 LINC00854A0A1B0GVQ3 168 aa14.37□□□□□ -0.11
USP47-207ENST00000527733 GRXCR2A6NFK2 248 aa14.37□□□□□ -0.11
USP47-207ENST00000527733 TNFRSF10CO14798 259 aa14.37□□□□□ -0.11
USP47-207ENST00000527733 AQP9O43315 295 aa14.37□□□□□ -0.11
USP47-207ENST00000527733 AHCYP23526 432 aa14.37□□□□□ -0.11
USP47-207ENST00000527733 FCHO2Q0JRZ9 810 aa14.37□□□□□ -0.11
USP47-207ENST00000527733 RAPSNQ13702 412 aa14.37□□□□□ -0.11
USP47-207ENST00000527733 RCAN2Q14206 197 aa14.37□□□□□ -0.11
USP47-207ENST00000527733 TMEM150AQ86TG1 271 aa14.37□□□□□ -0.11
USP47-207ENST00000527733 LILRA3Q8N6C8 439 aaPredicted RBP14.37□□□□□ -0.11
USP47-207ENST00000527733 ACOT4Q8N9L9 421 aa14.37□□□□□ -0.11
USP47-207ENST00000527733 GOLM1Q8NBJ4 401 aa14.37□□□□□ -0.11
USP47-207ENST00000527733 SP7Q8TDD2 431 aaPredicted RBP14.37□□□□□ -0.11
USP47-207ENST00000527733 NAT6Q93015 286 aa14.37□□□□□ -0.11
USP47-207ENST00000527733 KIAA1143Q96AT1 154 aaPredicted RBP14.37□□□□□ -0.11
USP47-207ENST00000527733 DOHHQ9BU89 302 aa14.37□□□□□ -0.11
USP47-207ENST00000527733 G6PC3Q9BUM1 346 aa14.37□□□□□ -0.11
USP47-207ENST00000527733 SERHL2Q9H4I8 314 aa14.37□□□□□ -0.11
USP47-207ENST00000527733 SERHLQ9NQF3 203 aa14.37□□□□□ -0.11
USP47-207ENST00000527733 MBNL1Q9NR56 388 aaKnown RBP14.37□□□□□ -0.11
USP47-207ENST00000527733 CUEDC1Q9NWM3 386 aaPredicted RBP14.37□□□□□ -0.11
USP47-207ENST00000527733 LRIT1Q9P2V4 623 aa14.37□□□□□ -0.11
USP47-207ENST00000527733 MYOCOSA0A1B0GUC4 107 aa14.37□□□□□ -0.11
USP47-207ENST00000527733 EME2A4GXA9 379 aaPredicted RBP14.37□□□□□ -0.11
USP47-207ENST00000527733 K7ESM1 405 aa14.37□□□□□ -0.11
USP47-207ENST00000527733 TCF3P15923 654 aa14.37□□□□□ -0.11
USP47-207ENST00000527733 AFF3P51826 1226 aaKnown RBP14.37□□□□□ -0.11
USP47-207ENST00000527733 RACK1P63244 317 aaKnown RBP14.37□□□□□ -0.11
USP47-207ENST00000527733 MCHR1Q99705 422 aa14.37□□□□□ -0.11
USP47-207ENST00000527733 NEK6Q9HC98 313 aa14.37□□□□□ -0.11
USP47-207ENST00000527733 OR51B4Q9Y5P0 310 aa14.37□□□□□ -0.11
USP47-207ENST00000527733 SLC9B1P1A6NJY1 282 aa14.37□□□□□ -0.11
USP47-207ENST00000527733 H0YIV9 168 aa14.37□□□□□ -0.11
USP47-207ENST00000527733 H3BNX3 289 aa14.37□□□□□ -0.11
USP47-207ENST00000527733 CD27P26842 260 aa14.37□□□□□ -0.11
USP47-207ENST00000527733 CERS1P27544 350 aa14.37□□□□□ -0.11
USP47-207ENST00000527733 TMEM207Q6UWW9 146 aa14.37□□□□□ -0.11
USP47-207ENST00000527733 DPH2Q9BQC3 489 aaPredicted RBP14.37□□□□□ -0.11
USP47-207ENST00000527733 CDADC1Q9BWV3 514 aa14.37□□□□□ -0.11
USP47-207ENST00000527733 PAIP1Q9H074 479 aaKnown RBP14.37□□□□□ -0.11
USP47-207ENST00000527733 C5AR2Q9P296 337 aa14.37□□□□□ -0.11
USP47-207ENST00000527733 RSL24D1Q9UHA3 163 aaKnown RBP14.37□□□□□ -0.11
USP47-207ENST00000527733 IKZF2Q9UKS7 526 aa14.37□□□□□ -0.11
USP47-207ENST00000527733 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.37□□□□□ -0.11
USP47-207ENST00000527733 PCDHB14Q9Y5E9 798 aa14.37□□□□□ -0.11
USP47-207ENST00000527733 AK1P00568 194 aa14.36□□□□□ -0.11
USP47-207ENST00000527733 HBQ1P09105 142 aa14.36□□□□□ -0.11
USP47-207ENST00000527733 DDCP20711 480 aa14.36□□□□□ -0.11
USP47-207ENST00000527733 KIAA1024LP59773 190 aa14.36□□□□□ -0.11
USP47-207ENST00000527733 RPS26P62854 115 aaKnown RBP14.36□□□□□ -0.11
USP47-207ENST00000527733 TMEM196Q5HYL7 178 aa14.36□□□□□ -0.11
USP47-207ENST00000527733 PAGE3Q5JUK9 113 aa14.36□□□□□ -0.11
USP47-207ENST00000527733 RNF111Q6ZNA4 994 aa14.36□□□□□ -0.11
USP47-207ENST00000527733 OR13H1Q8NG92 308 aa14.36□□□□□ -0.11
USP47-207ENST00000527733 FCRL4Q96PJ5 515 aa14.36□□□□□ -0.11
USP47-207ENST00000527733 EPYCQ99645 322 aa14.36□□□□□ -0.11
USP47-207ENST00000527733 BTNL2Q9UIR0 455 aa14.36□□□□□ -0.11
USP47-207ENST00000527733 HCN4Q9Y3Q4 1203 aa14.36□□□□□ -0.11
USP47-207ENST00000527733 NME4O00746 187 aa14.36□□□□□ -0.11
USP47-207ENST00000527733 TLX3O43711 291 aaPredicted RBP14.36□□□□□ -0.11
USP47-207ENST00000527733 ETFAP13804 333 aa14.36□□□□□ -0.11
USP47-207ENST00000527733 NDUFV2P19404 249 aa14.36□□□□□ -0.11
USP47-207ENST00000527733 AHRP35869 848 aa14.36□□□□□ -0.11
USP47-207ENST00000527733 OR1E2P47887 323 aa14.36□□□□□ -0.11
USP47-207ENST00000527733 ALDH3A2P51648 485 aa14.36□□□□□ -0.11
USP47-207ENST00000527733 TXNL4AP83876 142 aaKnown RBP14.36□□□□□ -0.11
USP47-207ENST00000527733 PIGGQ5H8A4 983 aa14.36□□□□□ -0.11
USP47-207ENST00000527733 MCATQ8IVS2 390 aaKnown RBP14.36□□□□□ -0.11
USP47-207ENST00000527733 CACTIN-AS1Q8N1I8 211 aa14.36□□□□□ -0.11
USP47-207ENST00000527733 RHBDD1Q8TEB9 315 aa14.36□□□□□ -0.11
USP47-207ENST00000527733 EDAQ92838 391 aa14.36□□□□□ -0.11
USP47-207ENST00000527733 ECHDC3Q96DC8 303 aa14.36□□□□□ -0.11
USP47-207ENST00000527733 MKRN2Q9H000 416 aaKnown RBP14.36□□□□□ -0.11
USP47-207ENST00000527733 RACGAP1Q9H0H5 632 aa14.36□□□□□ -0.11
USP47-207ENST00000527733 FGF22Q9HCT0 170 aa14.36□□□□□ -0.11
USP47-207ENST00000527733 MYNNQ9NPC7 610 aa14.36□□□□□ -0.11
USP47-207ENST00000527733 MED31Q9Y3C7 131 aa14.36□□□□□ -0.11
USP47-207ENST00000527733 LSM1O15116 133 aaKnown RBP14.36□□□□□ -0.11
USP47-207ENST00000527733 ZNF821O75541 412 aaPredicted RBP14.36□□□□□ -0.11
USP47-207ENST00000527733 ZNF888P0CJ79 500 aaPredicted RBP14.36□□□□□ -0.11
USP47-207ENST00000527733 C1orf189Q5VU69 101 aa14.36□□□□□ -0.11
USP47-207ENST00000527733 OR4K17Q8NGC6 315 aa14.36□□□□□ -0.11
USP47-207ENST00000527733 SUN3Q8TAQ9 357 aa14.36□□□□□ -0.11
USP47-207ENST00000527733 MRGPRX1Q96LB2 322 aa14.36□□□□□ -0.11
USP47-207ENST00000527733 COQ10AQ96MF6 247 aa14.36□□□□□ -0.11
USP47-207ENST00000527733 DEPDC7Q96QD5 511 aa14.36□□□□□ -0.11
USP47-207ENST00000527733 OR51V1Q9H2C8 321 aa14.36□□□□□ -0.11
USP47-207ENST00000527733 RCBTB2O95199 551 aa14.36□□□□□ -0.11
USP47-207ENST00000527733 POU2F2P09086 479 aa14.36□□□□□ -0.11
USP47-207ENST00000527733 T-ENOLP0DO92 83 aa14.36□□□□□ -0.11
USP47-207ENST00000527733 DBTP11182 482 aaKnown RBP14.36□□□□□ -0.11
USP47-207ENST00000527733 PVRP15151 417 aa14.36□□□□□ -0.11
USP47-207ENST00000527733 TMED10P49755 219 aaKnown RBP14.36□□□□□ -0.11
USP47-207ENST00000527733 GPNMBQ14956 572 aa14.36□□□□□ -0.11
USP47-207ENST00000527733 TRAM2Q15035 370 aa14.36□□□□□ -0.11
USP47-207ENST00000527733 SYT16Q17RD7 645 aa14.36□□□□□ -0.11
USP47-207ENST00000527733 GTDC1Q4AE62 458 aa14.36□□□□□ -0.11
USP47-207ENST00000527733 SWT1Q5T5J6 900 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms