RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 OR11G2Q8NGC1 345 aa10.11□□□□□ -0.79
NEDD8-205ENST00000527046 RFWD2Q8NHY2 731 aa10.11□□□□□ -0.79
NEDD8-205ENST00000527046 C8orf44Q96CB5 159 aa10.11□□□□□ -0.79
NEDD8-205ENST00000527046 IMMP1LQ96LU5 166 aa10.11□□□□□ -0.79
NEDD8-205ENST00000527046 PPP3R2Q96LZ3 170 aa10.11□□□□□ -0.79
NEDD8-205ENST00000527046 ZNF681Q96N22 645 aa10.11□□□□□ -0.79
NEDD8-205ENST00000527046 RPF2Q9H7B2 306 aaKnown RBP10.11□□□□□ -0.79
NEDD8-205ENST00000527046 COPS7BQ9H9Q2 264 aaPredicted RBP10.11□□□□□ -0.79
NEDD8-205ENST00000527046 SEMA3GQ9NS98 782 aa10.11□□□□□ -0.79
NEDD8-205ENST00000527046 C14orf105Q9NVL8 296 aa10.11□□□□□ -0.79
NEDD8-205ENST00000527046 LYARQ9NX58 379 aaKnown RBP10.11□□□□□ -0.79
NEDD8-205ENST00000527046 ASIC5Q9NY37 505 aa10.11□□□□□ -0.79
NEDD8-205ENST00000527046 GPN3Q9UHW5 284 aaPredicted RBP10.11□□□□□ -0.79
NEDD8-205ENST00000527046 NXT1Q9UKK6 140 aaKnown RBP10.11□□□□□ -0.79
NEDD8-205ENST00000527046 ERVK-11Q9UQG0 969 aa10.11□□□□□ -0.79
NEDD8-205ENST00000527046 PTPRQQ9UMZ3 2332 aa10.11□□□□□ -0.79
NEDD8-205ENST00000527046 A0A088AWK7 358 aa10.1□□□□□ -0.79
NEDD8-205ENST00000527046 SLCO1B7G3V0H7 640 aa10.1□□□□□ -0.79
NEDD8-205ENST00000527046 PRMT3O60678 531 aa10.1□□□□□ -0.79
NEDD8-205ENST00000527046 ALOX12BO75342 701 aa10.1□□□□□ -0.79
NEDD8-205ENST00000527046 TGDSO95455 350 aa10.1□□□□□ -0.79
NEDD8-205ENST00000527046 IL3P08700 152 aa10.1□□□□□ -0.79
NEDD8-205ENST00000527046 CD63P08962 238 aa10.1□□□□□ -0.79
NEDD8-205ENST00000527046 COX6A1P12074 109 aa10.1□□□□□ -0.79
NEDD8-205ENST00000527046 ACPPP15309 386 aa10.1□□□□□ -0.79
NEDD8-205ENST00000527046 ZNF10P21506 573 aaPredicted RBP10.1□□□□□ -0.79
NEDD8-205ENST00000527046 CPN2P22792 545 aa10.1□□□□□ -0.79
NEDD8-205ENST00000527046 FOLR3P41439 243 aa10.1□□□□□ -0.79
NEDD8-205ENST00000527046 ZFP36L2P47974 494 aaKnown RBP10.1□□□□□ -0.79
NEDD8-205ENST00000527046 SEC24CP53992 1094 aa10.1□□□□□ -0.79
NEDD8-205ENST00000527046 RPL38P63173 70 aaKnown RBP10.1□□□□□ -0.79
NEDD8-205ENST00000527046 ID2Q02363 134 aa10.1□□□□□ -0.79
NEDD8-205ENST00000527046 MGAT2Q10469 447 aa10.1□□□□□ -0.79
NEDD8-205ENST00000527046 PCOLCEQ15113 449 aa10.1□□□□□ -0.79
NEDD8-205ENST00000527046 CEBPEQ15744 281 aa10.1□□□□□ -0.79
NEDD8-205ENST00000527046 IMPG1Q17R60 797 aa10.1□□□□□ -0.79
NEDD8-205ENST00000527046 SMU1Q2TAY7 513 aa10.1□□□□□ -0.79
NEDD8-205ENST00000527046 LSM12Q3MHD2 195 aaKnown RBP10.1□□□□□ -0.79
NEDD8-205ENST00000527046 GALNTL6Q49A17 601 aa10.1□□□□□ -0.79
NEDD8-205ENST00000527046 ZNF385BQ569K4 471 aa10.1□□□□□ -0.79
NEDD8-205ENST00000527046 NDUFAF5Q5TEU4 345 aa10.1□□□□□ -0.79
NEDD8-205ENST00000527046 TMEM198Q66K66 360 aa10.1□□□□□ -0.79
NEDD8-205ENST00000527046 CPZQ66K79 652 aa10.1□□□□□ -0.79
NEDD8-205ENST00000527046 FAAH2Q6GMR7 532 aa10.1□□□□□ -0.79
NEDD8-205ENST00000527046 OGFOD2Q6N063 350 aa10.1□□□□□ -0.79
NEDD8-205ENST00000527046 FAM180BQ6P0A1 224 aa10.1□□□□□ -0.79
NEDD8-205ENST00000527046 SLC48A1Q6P1K1 146 aa10.1□□□□□ -0.79
NEDD8-205ENST00000527046 CYP20A1Q6UW02 462 aa10.1□□□□□ -0.79
NEDD8-205ENST00000527046 CCDC81Q6ZN84 652 aa10.1□□□□□ -0.79
NEDD8-205ENST00000527046 PAGE2Q7Z2X7 111 aa10.1□□□□□ -0.79
NEDD8-205ENST00000527046 HOMEZQ8IX15 550 aa10.1□□□□□ -0.79
NEDD8-205ENST00000527046 ZNF595Q8IYB9 648 aa10.1□□□□□ -0.79
NEDD8-205ENST00000527046 ACTRT2Q8TDY3 377 aa10.1□□□□□ -0.79
NEDD8-205ENST00000527046 DYDC1Q8WWB3 177 aa10.1□□□□□ -0.79
NEDD8-205ENST00000527046 KIAA1143Q96AT1 154 aaPredicted RBP10.1□□□□□ -0.79
NEDD8-205ENST00000527046 TUBGCP3Q96CW5 907 aa10.1□□□□□ -0.79
NEDD8-205ENST00000527046 CNRIP1Q96F85 164 aaPredicted RBP10.1□□□□□ -0.79
NEDD8-205ENST00000527046 TEX37Q96LM6 180 aa10.1□□□□□ -0.79
NEDD8-205ENST00000527046 PTCHD1Q96NR3 888 aa10.1□□□□□ -0.79
NEDD8-205ENST00000527046 CENPKQ9BS16 269 aa10.1□□□□□ -0.79
NEDD8-205ENST00000527046 CRB3Q9BUF7 120 aa10.1□□□□□ -0.79
NEDD8-205ENST00000527046 PRORYQ9H606 182 aa10.1□□□□□ -0.79
NEDD8-205ENST00000527046 MYNNQ9NPC7 610 aa10.1□□□□□ -0.79
NEDD8-205ENST00000527046 PRDM9Q9NQV7 894 aa10.1□□□□□ -0.79
NEDD8-205ENST00000527046 PRTFDC1Q9NRG1 225 aa10.1□□□□□ -0.79
NEDD8-205ENST00000527046 FGFR1OP2Q9NVK5 253 aa10.1□□□□□ -0.79
NEDD8-205ENST00000527046 MS4A12Q9NXJ0 267 aa10.1□□□□□ -0.79
NEDD8-205ENST00000527046 TAS2R7Q9NYW3 318 aa10.1□□□□□ -0.79
NEDD8-205ENST00000527046 C5AR2Q9P296 337 aa10.1□□□□□ -0.79
NEDD8-205ENST00000527046 VTI1BQ9UEU0 232 aa10.1□□□□□ -0.79
NEDD8-205ENST00000527046 PHF11Q9UIL8 331 aa10.1□□□□□ -0.79
NEDD8-205ENST00000527046 MMACHCQ9Y4U1 282 aa10.1□□□□□ -0.79
NEDD8-205ENST00000527046 CROCCQ5TZA2 2017 aa10.1□□□□□ -0.79
NEDD8-205ENST00000527046 TPRP12270 2363 aaKnown RBP10.1□□□□□ -0.79
NEDD8-205ENST00000527046 MAP1BP46821 2468 aaKnown RBP10.1□□□□□ -0.79
NEDD8-205ENST00000527046 ZFHX4Q86UP3 3567 aa10.1□□□□□ -0.79
NEDD8-205ENST00000527046 DOCK10Q96BY6 2186 aa10.09□□□□□ -0.79
NEDD8-205ENST00000527046 ACACBO00763 2458 aa10.09□□□□□ -0.79
NEDD8-205ENST00000527046 IGHV1-45A0A0A0MS14 117 aa10.09□□□□□ -0.79
NEDD8-205ENST00000527046 C1orf226A1L170 272 aa10.09□□□□□ -0.79
NEDD8-205ENST00000527046 GABRR3A8MPY1 467 aa10.09□□□□□ -0.79
NEDD8-205ENST00000527046 RRP8O43159 456 aaKnown RBP10.09□□□□□ -0.79
NEDD8-205ENST00000527046 GPR75O95800 540 aa10.09□□□□□ -0.79
NEDD8-205ENST00000527046 HEXBP07686 556 aa10.09□□□□□ -0.79
NEDD8-205ENST00000527046 CYC1P08574 325 aa10.09□□□□□ -0.79
NEDD8-205ENST00000527046 G6PDP11413 515 aa10.09□□□□□ -0.79
NEDD8-205ENST00000527046 IL12AP29459 219 aa10.09□□□□□ -0.79
NEDD8-205ENST00000527046 AQP5P55064 265 aa10.09□□□□□ -0.79
NEDD8-205ENST00000527046 SKP1P63208 163 aa10.09□□□□□ -0.79
NEDD8-205ENST00000527046 PHC1P78364 1004 aa10.09□□□□□ -0.79
NEDD8-205ENST00000527046 FOLH1Q04609 750 aa10.09□□□□□ -0.79
NEDD8-205ENST00000527046 VAC14Q08AM6 782 aa10.09□□□□□ -0.79
NEDD8-205ENST00000527046 C2orf80Q0P641 193 aa10.09□□□□□ -0.79
NEDD8-205ENST00000527046 CDC20Q12834 499 aa10.09□□□□□ -0.79
NEDD8-205ENST00000527046 PDE7AQ13946 482 aa10.09□□□□□ -0.79
NEDD8-205ENST00000527046 PTGR1Q14914 329 aa10.09□□□□□ -0.79
NEDD8-205ENST00000527046 MINDY4Q4G0A6 757 aa10.09□□□□□ -0.79
NEDD8-205ENST00000527046 MRGPREQ86SM8 312 aa10.09□□□□□ -0.79
NEDD8-205ENST00000527046 LIX1Q8N485 282 aa10.09□□□□□ -0.79
NEDD8-205ENST00000527046 KRTCAP2Q8N6L1 136 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms