RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 WDR47O94967 919 aa13.17□□□□□ -0.3
CPSF1-201ENST00000526271 TTC4O95801 387 aa13.17□□□□□ -0.3
CPSF1-201ENST00000526271 SAT1P21673 171 aa13.17□□□□□ -0.3
CPSF1-201ENST00000526271 FASTKD3Q14CZ7 662 aaKnown RBP13.17□□□□□ -0.3
CPSF1-201ENST00000526271 CEBPEQ15744 281 aa13.17□□□□□ -0.3
CPSF1-201ENST00000526271 ZNF791Q3KP31 576 aaPredicted RBP13.17□□□□□ -0.3
CPSF1-201ENST00000526271 B3GNT6Q6ZMB0 384 aa13.17□□□□□ -0.3
CPSF1-201ENST00000526271 C9orf40Q8IXQ3 194 aa13.17□□□□□ -0.3
CPSF1-201ENST00000526271 GPALPP1Q8IXQ4 340 aa13.17□□□□□ -0.3
CPSF1-201ENST00000526271 KLHL7Q8IXQ5 586 aa13.17□□□□□ -0.3
CPSF1-201ENST00000526271 ZNF595Q8IYB9 648 aa13.17□□□□□ -0.3
CPSF1-201ENST00000526271 FAM109AQ8N4B1 249 aa13.17□□□□□ -0.3
CPSF1-201ENST00000526271 SPATA6LQ8N4H0 392 aa13.17□□□□□ -0.3
CPSF1-201ENST00000526271 CEP112Q8N8E3 955 aa13.17□□□□□ -0.3
CPSF1-201ENST00000526271 MNS1Q8NEH6 495 aa13.17□□□□□ -0.3
CPSF1-201ENST00000526271 ARMC2Q8NEN0 867 aa13.17□□□□□ -0.3
CPSF1-201ENST00000526271 OR2L5Q8NG80 312 aa13.17□□□□□ -0.3
CPSF1-201ENST00000526271 SLC2A12Q8TD20 617 aa13.17□□□□□ -0.3
CPSF1-201ENST00000526271 CFAP36Q96G28 342 aa13.17□□□□□ -0.3
CPSF1-201ENST00000526271 F2RL3Q96RI0 385 aa13.17□□□□□ -0.3
CPSF1-201ENST00000526271 KRT12Q99456 494 aa13.17□□□□□ -0.3
CPSF1-201ENST00000526271 SH3GL2Q99962 352 aa13.17□□□□□ -0.3
CPSF1-201ENST00000526271 SORBS1Q9BX66 1292 aaKnown RBP13.17□□□□□ -0.3
CPSF1-201ENST00000526271 ALOXE3Q9BYJ1 711 aa13.17□□□□□ -0.3
CPSF1-201ENST00000526271 OR8D2Q9GZM6 311 aa13.17□□□□□ -0.3
CPSF1-201ENST00000526271 NT5DC2Q9H857 520 aa13.17□□□□□ -0.3
CPSF1-201ENST00000526271 CRIM1Q9NZV1 1036 aa13.17□□□□□ -0.3
CPSF1-201ENST00000526271 PLEKHA6Q9Y2H5 1048 aa13.17□□□□□ -0.3
CPSF1-201ENST00000526271 KCNE2Q9Y6J6 123 aa13.17□□□□□ -0.3
CPSF1-201ENST00000526271 JMJD1CQ15652 2540 aa13.17□□□□□ -0.3
CPSF1-201ENST00000526271 A0A1W2PPR1 153 aa13.16□□□□□ -0.3
CPSF1-201ENST00000526271 WASHC1A8K0Z3 465 aa13.16□□□□□ -0.3
CPSF1-201ENST00000526271 B3GALT2O43825 422 aa13.16□□□□□ -0.3
CPSF1-201ENST00000526271 CLPSP04118 112 aa13.16□□□□□ -0.3
CPSF1-201ENST00000526271 IGKV3-11P04433 115 aa13.16□□□□□ -0.3
CPSF1-201ENST00000526271 KCNC1P48547 511 aa13.16□□□□□ -0.3
CPSF1-201ENST00000526271 STXBP1P61764 594 aaKnown RBP13.16□□□□□ -0.3
CPSF1-201ENST00000526271 IGLV3-21P80748 117 aaPredicted RBP13.16□□□□□ -0.3
CPSF1-201ENST00000526271 C2orf54Q08AI8 447 aa13.16□□□□□ -0.3
CPSF1-201ENST00000526271 C1orf185Q5T7R7 199 aa13.16□□□□□ -0.3
CPSF1-201ENST00000526271 NDUFAF5Q5TEU4 345 aa13.16□□□□□ -0.3
CPSF1-201ENST00000526271 CES4AQ5XG92 561 aa13.16□□□□□ -0.3
CPSF1-201ENST00000526271 ARSKQ6UWY0 536 aa13.16□□□□□ -0.3
CPSF1-201ENST00000526271 HSDL2Q6YN16 418 aa13.16□□□□□ -0.3
CPSF1-201ENST00000526271 RTL4Q6ZR62 310 aa13.16□□□□□ -0.3
CPSF1-201ENST00000526271 RGS9BPQ6ZS82 235 aa13.16□□□□□ -0.3
CPSF1-201ENST00000526271 SYDE1Q6ZW31 735 aaPredicted RBP13.16□□□□□ -0.3
CPSF1-201ENST00000526271 SLC22A16Q86VW1 577 aa13.16□□□□□ -0.3
CPSF1-201ENST00000526271 RNF175Q8N4F7 328 aa13.16□□□□□ -0.3
CPSF1-201ENST00000526271 MMGT1Q8N4V1 131 aa13.16□□□□□ -0.3
CPSF1-201ENST00000526271 TBC1D19Q8N5T2 526 aa13.16□□□□□ -0.3
CPSF1-201ENST00000526271 GOLM1Q8NBJ4 401 aa13.16□□□□□ -0.3
CPSF1-201ENST00000526271 MORN4Q8NDC4 146 aa13.16□□□□□ -0.3
CPSF1-201ENST00000526271 OR10Q1Q8NGQ4 319 aa13.16□□□□□ -0.3
CPSF1-201ENST00000526271 ANKRD7Q92527 254 aa13.16□□□□□ -0.3
CPSF1-201ENST00000526271 WDR34Q96EX3 536 aa13.16□□□□□ -0.3
CPSF1-201ENST00000526271 SERINC2Q96SA4 455 aa13.16□□□□□ -0.3
CPSF1-201ENST00000526271 SMR3AQ99954 134 aa13.16□□□□□ -0.3
CPSF1-201ENST00000526271 FAM173AQ9BQD7 235 aa13.16□□□□□ -0.3
CPSF1-201ENST00000526271 TRIM54Q9BYV2 358 aa13.16□□□□□ -0.3
CPSF1-201ENST00000526271 REXO4Q9GZR2 422 aaKnown RBP13.16□□□□□ -0.3
CPSF1-201ENST00000526271 SLC6A15Q9H2J7 730 aa13.16□□□□□ -0.3
CPSF1-201ENST00000526271 ZNF703Q9H7S9 590 aaPredicted RBP13.16□□□□□ -0.3
CPSF1-201ENST00000526271 RASSF1Q9NS23 344 aa13.16□□□□□ -0.3
CPSF1-201ENST00000526271 FBN3Q75N90 2809 aa13.16□□□□□ -0.3
CPSF1-201ENST00000526271 FAM95CA0A1B0GW59 222 aa13.15□□□□□ -0.3
CPSF1-201ENST00000526271 NCF1BA6NI72 391 aaPredicted RBP13.15□□□□□ -0.3
CPSF1-201ENST00000526271 NCF1CA8MVU1 366 aaPredicted RBP13.15□□□□□ -0.3
CPSF1-201ENST00000526271 C17orf105B2RV13 164 aa13.15□□□□□ -0.3
CPSF1-201ENST00000526271 BCKDKO14874 412 aa13.15□□□□□ -0.3
CPSF1-201ENST00000526271 FGF17O60258 216 aa13.15□□□□□ -0.3
CPSF1-201ENST00000526271 SUSD5O60279 629 aa13.15□□□□□ -0.3
CPSF1-201ENST00000526271 PRKRAO75569 313 aaKnown RBP13.15□□□□□ -0.3
CPSF1-201ENST00000526271 ZWINTO95229 277 aa13.15□□□□□ -0.3
CPSF1-201ENST00000526271 LRATO95237 230 aa13.15□□□□□ -0.3
CPSF1-201ENST00000526271 CTAGE8P0CG41 777 aa13.15□□□□□ -0.3
CPSF1-201ENST00000526271 NCF1P14598 390 aaPredicted RBP13.15□□□□□ -0.3
CPSF1-201ENST00000526271 MTTPP55157 894 aa13.15□□□□□ -0.3
CPSF1-201ENST00000526271 ADAM8P78325 824 aa13.15□□□□□ -0.3
CPSF1-201ENST00000526271 DR1Q01658 176 aa13.15□□□□□ -0.3
CPSF1-201ENST00000526271 ASPHQ12797 758 aa13.15□□□□□ -0.3
CPSF1-201ENST00000526271 BMPR2Q13873 1038 aa13.15□□□□□ -0.3
CPSF1-201ENST00000526271 DOC2AQ14183 400 aa13.15□□□□□ -0.3
CPSF1-201ENST00000526271 E2F2Q14209 437 aa13.15□□□□□ -0.3
CPSF1-201ENST00000526271 TGFBIQ15582 683 aa13.15□□□□□ -0.3
CPSF1-201ENST00000526271 OR4D1Q15615 310 aa13.15□□□□□ -0.3
CPSF1-201ENST00000526271 PIGGQ5H8A4 983 aa13.15□□□□□ -0.3
CPSF1-201ENST00000526271 CDC20BQ86Y33 519 aa13.15□□□□□ -0.3
CPSF1-201ENST00000526271 CTAGE4Q8IX94 777 aa13.15□□□□□ -0.3
CPSF1-201ENST00000526271 OR4N5Q8IXE1 308 aa13.15□□□□□ -0.3
CPSF1-201ENST00000526271 TMEM132CQ8N3T6 1108 aa13.15□□□□□ -0.3
CPSF1-201ENST00000526271 CCT6BQ92526 530 aa13.15□□□□□ -0.3
CPSF1-201ENST00000526271 NINJ1Q92982 152 aa13.15□□□□□ -0.3
CPSF1-201ENST00000526271 UCN3Q969E3 161 aa13.15□□□□□ -0.3
CPSF1-201ENST00000526271 CCDC77Q9BR77 488 aa13.15□□□□□ -0.3
CPSF1-201ENST00000526271 MS4A8Q9BY19 250 aa13.15□□□□□ -0.3
CPSF1-201ENST00000526271 MOCS1Q9NZB8 636 aa13.15□□□□□ -0.3
CPSF1-201ENST00000526271 CORO1CQ9ULV4 474 aaPredicted RBP13.15□□□□□ -0.3
CPSF1-201ENST00000526271 CBLCQ9ULV8 474 aa13.15□□□□□ -0.3
CPSF1-201ENST00000526271 ANK3Q12955 4377 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms