RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 SLC6A12P48065 614 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 RGS7P49802 495 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 PAX9P55771 341 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 ERVK11-1P61568 191 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 CACNG1Q06432 222 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 SULT2A1Q06520 285 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 TMEM187Q14656 261 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 CCDC6Q16204 474 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 SPOUT1Q5T280 376 aaKnown RBP3.4□□□□□ -1.87
CD44-219ENST00000525685 LCE1FQ5T754 118 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 WLSQ5T9L3 541 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 UGT3A1Q6NUS8 523 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 PSRC1Q6PGN9 363 aaPredicted RBP3.4□□□□□ -1.87
CD44-219ENST00000525685 BHLHB9Q6PI77 547 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 SUSD1Q6UWL2 747 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 Q6ZSR9 355 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 CHMP1BQ7LBR1 199 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 ANKRD33Q7Z3H0 272 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 ABI3BPQ7Z7G0 1075 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 LACC1Q8IV20 430 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 HSCBQ8IWL3 235 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 C4orf19Q8IY42 314 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 SIX6OS1Q8N1H7 587 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 OR6S1Q8NH40 331 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 GRK7Q8WTQ7 553 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 DEPDC1BQ8WUY9 529 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 HEXDCQ8WVB3 486 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 WBP2Q969T9 261 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 ART5Q96L15 291 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 C4orf45Q96LM5 186 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 CCDC114Q96M63 670 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 AK8Q96MA6 479 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 BTBD9Q96Q07 612 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 ZNF577Q9BSK1 485 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 CLEC7AQ9BXN2 247 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 SHARPINQ9H0F6 387 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 SDCBP2Q9H190 292 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 ZWILCHQ9H900 591 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 SLC12A6Q9UHW9 1150 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 SMC3Q9UQE7 1217 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 PPP2R2CQ9Y2T4 447 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 NFASCO94856 1347 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 UMODL1Q5DID0 1318 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 MROH7Q68CQ1 1323 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 IGSF9BQ9UPX0 1349 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 SIP14410 1827 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 ARID2Q68CP9 1835 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 IGKV6D-21A0A0A0MT36 114 aa3.39□□□□□ -1.87
CD44-219ENST00000525685 A0A1W2PPK0 400 aa3.39□□□□□ -1.87
CD44-219ENST00000525685 MEIOCA2RUB1 952 aa3.39□□□□□ -1.87
CD44-219ENST00000525685 VPS37CA5D8V6 355 aaPredicted RBP3.39□□□□□ -1.87
CD44-219ENST00000525685 CHMP2AO43633 222 aa3.39□□□□□ -1.87
CD44-219ENST00000525685 ATP6AP2O75787 350 aa3.39□□□□□ -1.87
CD44-219ENST00000525685 SUPT20HL2P0C7V6 817 aa3.39□□□□□ -1.87
CD44-219ENST00000525685 SMIM10L2AP0DMW4 78 aa3.39□□□□□ -1.87
CD44-219ENST00000525685 SMIM10L2BP0DMW5 78 aa3.39□□□□□ -1.87
CD44-219ENST00000525685 GCFC2P16383 781 aaKnown RBP3.39□□□□□ -1.87
CD44-219ENST00000525685 CEBPBP17676 345 aa3.39□□□□□ -1.87
CD44-219ENST00000525685 CD27P26842 260 aa3.39□□□□□ -1.87
CD44-219ENST00000525685 HOXC13P31276 330 aa3.39□□□□□ -1.87
CD44-219ENST00000525685 ARMC3Q5W041 872 aa3.39□□□□□ -1.87
CD44-219ENST00000525685 LYSMD4Q5XG99 296 aa3.39□□□□□ -1.87
CD44-219ENST00000525685 FAM91A1Q658Y4 838 aa3.39□□□□□ -1.87
CD44-219ENST00000525685 TTC27Q6P3X3 843 aa3.39□□□□□ -1.87
CD44-219ENST00000525685 FUT10Q6P4F1 479 aa3.39□□□□□ -1.87
CD44-219ENST00000525685 CCDC60Q8IWA6 550 aaPredicted RBP3.39□□□□□ -1.87
CD44-219ENST00000525685 TIGD4Q8IY51 512 aa3.39□□□□□ -1.87
CD44-219ENST00000525685 WDSUB1Q8N9V3 476 aa3.39□□□□□ -1.87
CD44-219ENST00000525685 OR5AP2Q8NGF4 316 aa3.39□□□□□ -1.87
CD44-219ENST00000525685 OR4C15Q8NGM1 316 aa3.39□□□□□ -1.87
CD44-219ENST00000525685 C9orf43Q8TAL5 461 aaPredicted RBP3.39□□□□□ -1.87
CD44-219ENST00000525685 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.39□□□□□ -1.87
CD44-219ENST00000525685 SMAP2Q8WU79 429 aaPredicted RBP3.39□□□□□ -1.87
CD44-219ENST00000525685 SEPT1Q8WYJ6 367 aa3.39□□□□□ -1.87
CD44-219ENST00000525685 RIT2Q99578 217 aa3.39□□□□□ -1.87
CD44-219ENST00000525685 LPAR4Q99677 370 aa3.39□□□□□ -1.87
CD44-219ENST00000525685 MAP3K3Q99759 626 aa3.39□□□□□ -1.87
CD44-219ENST00000525685 INPP5KQ9BT40 448 aa3.39□□□□□ -1.87
CD44-219ENST00000525685 TEKT3Q9BXF9 490 aa3.39□□□□□ -1.87
CD44-219ENST00000525685 TRPV6Q9H1D0 765 aa3.39□□□□□ -1.87
CD44-219ENST00000525685 ATP13A3Q9H7F0 1226 aa3.39□□□□□ -1.87
CD44-219ENST00000525685 KCNMB3Q9NPA1 279 aa3.39□□□□□ -1.87
CD44-219ENST00000525685 PLCXD1Q9NUJ7 323 aa3.39□□□□□ -1.87
CD44-219ENST00000525685 MRGBPQ9NV56 204 aa3.39□□□□□ -1.87
CD44-219ENST00000525685 KLHL8Q9P2G9 620 aaPredicted RBP3.39□□□□□ -1.87
CD44-219ENST00000525685 PRDM4Q9UKN5 801 aa3.39□□□□□ -1.87
CD44-219ENST00000525685 TBX21Q9UL17 535 aa3.39□□□□□ -1.87
CD44-219ENST00000525685 NOL7Q9UMY1 257 aaKnown RBP3.39□□□□□ -1.87
CD44-219ENST00000525685 PPP1R3CQ9UQK1 317 aa3.39□□□□□ -1.87
CD44-219ENST00000525685 RUVBL2Q9Y230 463 aaKnown RBP3.39□□□□□ -1.87
CD44-219ENST00000525685 KIF3AQ9Y496 699 aa3.39□□□□□ -1.87
CD44-219ENST00000525685 H3BQV1 296 aa3.38□□□□□ -1.87
CD44-219ENST00000525685 CCDC188H7C350 402 aa3.38□□□□□ -1.87
CD44-219ENST00000525685 O00370 1275 aa3.38□□□□□ -1.87
CD44-219ENST00000525685 NR5A2O00482 541 aa3.38□□□□□ -1.87
CD44-219ENST00000525685 NEMFO60524 1076 aa3.38□□□□□ -1.87
CD44-219ENST00000525685 TCF4P15884 667 aa3.38□□□□□ -1.87
CD44-219ENST00000525685 ZNF26P17031 533 aaPredicted RBP3.38□□□□□ -1.87
CD44-219ENST00000525685 RPL35AP18077 110 aaKnown RBP3.38□□□□□ -1.87
CD44-219ENST00000525685 SYT1P21579 422 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms