RNA–Protein interactions for RNA: ENST00000525459.1

PTPRK-218, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2 BASIC

Gene PTPRK, Length 1,722 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-218ENST00000525459 EFSO43281 561 aa17.59■□□□□ 0.41
PTPRK-218ENST00000525459 JRKO75564 520 aa17.59■□□□□ 0.41
PTPRK-218ENST00000525459 CDC123O75794 336 aaPredicted RBP17.59■□□□□ 0.41
PTPRK-218ENST00000525459 RPL3P39023 403 aaKnown RBP17.59■□□□□ 0.41
PTPRK-218ENST00000525459 TAS2R50P59544 299 aa17.59■□□□□ 0.41
PTPRK-218ENST00000525459 IL10RAQ13651 578 aa17.59■□□□□ 0.41
PTPRK-218ENST00000525459 SERTAD2Q14140 314 aa17.59■□□□□ 0.41
PTPRK-218ENST00000525459 TMEM205Q6UW68 189 aa17.59■□□□□ 0.41
PTPRK-218ENST00000525459 SHISA6Q6ZSJ9 500 aa17.59■□□□□ 0.41
PTPRK-218ENST00000525459 ACAD11Q709F0 780 aa17.59■□□□□ 0.41
PTPRK-218ENST00000525459 LARP4Q71RC2 724 aaKnown RBP eCLIP17.59■□□□□ 0.419e-6■■□□□ 12.1
PTPRK-218ENST00000525459 LAPTM4BQ86VI4 370 aa17.59■□□□□ 0.41
PTPRK-218ENST00000525459 CEP70Q8NHQ1 597 aa17.59■□□□□ 0.41
PTPRK-218ENST00000525459 ACTRT2Q8TDY3 377 aa17.59■□□□□ 0.41
PTPRK-218ENST00000525459 C16orf78Q8WTQ4 265 aa17.59■□□□□ 0.41
PTPRK-218ENST00000525459 TM4SF18Q96CE8 201 aa17.59■□□□□ 0.41
PTPRK-218ENST00000525459 ZNF764Q96H86 408 aaPredicted RBP17.59■□□□□ 0.41
PTPRK-218ENST00000525459 PPP1R36Q96LQ0 422 aa17.59■□□□□ 0.41
PTPRK-218ENST00000525459 PTCHD1Q96NR3 888 aa17.59■□□□□ 0.41
PTPRK-218ENST00000525459 CATSPER2Q96P56 530 aa17.59■□□□□ 0.41
PTPRK-218ENST00000525459 PSME2Q9UL46 239 aa17.59■□□□□ 0.41
PTPRK-218ENST00000525459 PCDHA9Q9Y5H5 950 aa17.59■□□□□ 0.41
PTPRK-218ENST00000525459 IGKV3D-11A0A0A0MRZ8 115 aa17.58■□□□□ 0.41
PTPRK-218ENST00000525459 ZNF195O14628 629 aa17.58■□□□□ 0.41
PTPRK-218ENST00000525459 VIMP08670 466 aaKnown RBP17.58■□□□□ 0.41
PTPRK-218ENST00000525459 SDC1P18827 310 aa17.58■□□□□ 0.41
PTPRK-218ENST00000525459 CDC20Q12834 499 aa17.58■□□□□ 0.41
PTPRK-218ENST00000525459 ERV3-1Q14264 604 aa17.58■□□□□ 0.41
PTPRK-218ENST00000525459 NSDHLQ15738 373 aa17.58■□□□□ 0.41
PTPRK-218ENST00000525459 EPGNQ6UW88 154 aa17.58■□□□□ 0.41
PTPRK-218ENST00000525459 SPATA19Q7Z5L4 167 aa17.58■□□□□ 0.41
PTPRK-218ENST00000525459 SAMD14Q8IZD0 417 aaPredicted RBP17.58■□□□□ 0.41
PTPRK-218ENST00000525459 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.58■□□□□ 0.41
PTPRK-218ENST00000525459 PELOQ9BRX2 385 aaKnown RBP17.58■□□□□ 0.41
PTPRK-218ENST00000525459 DLGAP4Q9Y2H0 992 aa17.58■□□□□ 0.41
PTPRK-218ENST00000525459 LOC102723996A0A087X1L8 192 aa17.58■□□□□ 0.4
PTPRK-218ENST00000525459 TCRBV16S1A1N1A0A5B0 115 aa17.58■□□□□ 0.4
PTPRK-218ENST00000525459 FAM227AF5H4B4 570 aa17.58■□□□□ 0.4
PTPRK-218ENST00000525459 K7ENP7 123 aa17.58■□□□□ 0.4
PTPRK-218ENST00000525459 PEX12O00623 359 aa17.58■□□□□ 0.4
PTPRK-218ENST00000525459 POLR3GO15318 223 aaPredicted RBP17.58■□□□□ 0.4
PTPRK-218ENST00000525459 IL3P08700 152 aa17.58■□□□□ 0.4
PTPRK-218ENST00000525459 EPHA3P29320 983 aa17.58■□□□□ 0.4
PTPRK-218ENST00000525459 OTX2P32243 289 aa17.58■□□□□ 0.4
PTPRK-218ENST00000525459 IRX1P78414 480 aaPredicted RBP17.58■□□□□ 0.4
PTPRK-218ENST00000525459 VAC14Q08AM6 782 aa17.58■□□□□ 0.4
PTPRK-218ENST00000525459 STX4Q12846 297 aa17.58■□□□□ 0.4
PTPRK-218ENST00000525459 C18orf63Q68DL7 685 aa17.58■□□□□ 0.4
PTPRK-218ENST00000525459 SLC48A1Q6P1K1 146 aa17.58■□□□□ 0.4
PTPRK-218ENST00000525459 INO80CQ6PI98 192 aaPredicted RBP17.58■□□□□ 0.4
PTPRK-218ENST00000525459 MRGPREQ86SM8 312 aa17.58■□□□□ 0.4
PTPRK-218ENST00000525459 SNRNP27Q8WVK2 155 aaKnown RBP17.58■□□□□ 0.4
PTPRK-218ENST00000525459 MTERF3Q96E29 417 aa17.58■□□□□ 0.4
PTPRK-218ENST00000525459 MIEF1Q9NQG6 463 aa17.58■□□□□ 0.4
PTPRK-218ENST00000525459 ZMIZ1Q9ULJ6 1067 aa17.58■□□□□ 0.4
PTPRK-218ENST00000525459 POLHQ9Y253 713 aa17.58■□□□□ 0.4
PTPRK-218ENST00000525459 HS3ST3B1Q9Y662 390 aa17.58■□□□□ 0.4
PTPRK-218ENST00000525459 TPRP12270 2363 aaKnown RBP17.57■□□□□ 0.4
PTPRK-218ENST00000525459 DIAPH2O60879 1101 aa17.57■□□□□ 0.4
PTPRK-218ENST00000525459 BCKDHAP12694 445 aa17.57■□□□□ 0.4
PTPRK-218ENST00000525459 DDCP20711 480 aa17.57■□□□□ 0.4
PTPRK-218ENST00000525459 IGLV3-21P80748 117 aaPredicted RBP17.57■□□□□ 0.4
PTPRK-218ENST00000525459 SRSF6Q13247 344 aaKnown RBP17.57■□□□□ 0.4
PTPRK-218ENST00000525459 TERF2Q15554 542 aa17.57■□□□□ 0.4
PTPRK-218ENST00000525459 MAVSQ7Z434 540 aa17.57■□□□□ 0.4
PTPRK-218ENST00000525459 PPP1R32Q7Z5V6 425 aa17.57■□□□□ 0.4
PTPRK-218ENST00000525459 TMEM52Q8NDY8 209 aa17.57■□□□□ 0.4
PTPRK-218ENST00000525459 DNAJB14Q8TBM8 379 aa17.57■□□□□ 0.4
PTPRK-218ENST00000525459 FGFR1OP2Q9NVK5 253 aa17.57■□□□□ 0.4
PTPRK-218ENST00000525459 CDC14CA4D256 554 aa17.56■□□□□ 0.4
PTPRK-218ENST00000525459 MAOAP21397 527 aa17.56■□□□□ 0.4
PTPRK-218ENST00000525459 PIK3R1P27986 724 aa17.56■□□□□ 0.4
PTPRK-218ENST00000525459 HPCAL1P37235 193 aa17.56■□□□□ 0.4
PTPRK-218ENST00000525459 HNRNPFP52597 415 aaKnown RBP17.56■□□□□ 0.4
PTPRK-218ENST00000525459 RRADP55042 308 aa17.56■□□□□ 0.4
PTPRK-218ENST00000525459 AQP5P55064 265 aa17.56■□□□□ 0.4
PTPRK-218ENST00000525459 PLIN5Q00G26 463 aa17.56■□□□□ 0.4
PTPRK-218ENST00000525459 VWA5B1Q5TIE3 1220 aa17.56■□□□□ 0.4
PTPRK-218ENST00000525459 IL23RQ5VWK5 629 aa17.56■□□□□ 0.4
PTPRK-218ENST00000525459 FAM71E1Q6IPT2 247 aa17.56■□□□□ 0.4
PTPRK-218ENST00000525459 R3HCC1LQ7Z5L2 792 aaKnown RBP17.56■□□□□ 0.4
PTPRK-218ENST00000525459 LIX1Q8N485 282 aa17.56■□□□□ 0.4
PTPRK-218ENST00000525459 CDC26Q8NHZ8 85 aa17.56■□□□□ 0.4
PTPRK-218ENST00000525459 CHMP6Q96FZ7 201 aa17.56■□□□□ 0.4
PTPRK-218ENST00000525459 CCDC28BQ9BUN5 200 aa17.56■□□□□ 0.4
PTPRK-218ENST00000525459 C1orf50Q9BV19 199 aa17.56■□□□□ 0.4
PTPRK-218ENST00000525459 NSRP1Q9H0G5 558 aaKnown RBP17.56■□□□□ 0.4
PTPRK-218ENST00000525459 TCF7L2Q9NQB0 619 aa17.56■□□□□ 0.4
PTPRK-218ENST00000525459 GIMAP4Q9NUV9 329 aa17.56■□□□□ 0.4
PTPRK-218ENST00000525459 GIMAP2Q9UG22 337 aa17.56■□□□□ 0.4
PTPRK-218ENST00000525459 PTPRQQ9UMZ3 2332 aa17.56■□□□□ 0.4
PTPRK-218ENST00000525459 GPR75O95800 540 aa17.55■□□□□ 0.4
PTPRK-218ENST00000525459 WT1P19544 449 aaPredicted RBP17.55■□□□□ 0.4
PTPRK-218ENST00000525459 ALDH9A1P49189 494 aa17.55■□□□□ 0.4
PTPRK-218ENST00000525459 AP2B1P63010 937 aa17.55■□□□□ 0.4
PTPRK-218ENST00000525459 BTG2P78543 158 aa17.55■□□□□ 0.4
PTPRK-218ENST00000525459 FOLH1Q04609 750 aa17.55■□□□□ 0.4
PTPRK-218ENST00000525459 ACTN3Q08043 901 aaPredicted RBP17.55■□□□□ 0.4
PTPRK-218ENST00000525459 C2orf80Q0P641 193 aa17.55■□□□□ 0.4
PTPRK-218ENST00000525459 SLC9B1Q4ZJI4 515 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms