RNA–Protein interactions for RNA: ENST00000525074.5

TRIM3-203, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRIM3, Length 3,044 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-203ENST00000525074 XKRXQ6PP77 449 aa12.55□□□□□ -0.4
TRIM3-203ENST00000525074 IFNL1Q8IU54 200 aa12.55□□□□□ -0.4
TRIM3-203ENST00000525074 MMP21Q8N119 569 aa12.55□□□□□ -0.4
TRIM3-203ENST00000525074 FAM46DQ8NEK8 389 aa12.55□□□□□ -0.4
TRIM3-203ENST00000525074 VPS37AQ8NEZ2 397 aa12.55□□□□□ -0.4
TRIM3-203ENST00000525074 OR6C4Q8NGE1 309 aa12.55□□□□□ -0.4
TRIM3-203ENST00000525074 TMEM80Q96HE8 168 aa12.55□□□□□ -0.4
TRIM3-203ENST00000525074 PIP5K1AQ99755 562 aa12.55□□□□□ -0.4
TRIM3-203ENST00000525074 PPIL3Q9H2H8 161 aaKnown RBP12.55□□□□□ -0.4
TRIM3-203ENST00000525074 DNAJC11Q9NVH1 559 aa12.55□□□□□ -0.4
TRIM3-203ENST00000525074 LHX3Q9UBR4 397 aa12.55□□□□□ -0.4
TRIM3-203ENST00000525074 LSM2Q9Y333 95 aaKnown RBP12.55□□□□□ -0.4
TRIM3-203ENST00000525074 ZAR1LA6NP61 321 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 FADS2P1A8MWK0 482 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 TBL1XO60907 577 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 IGHA2P01877 340 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 CHI3L1P36222 383 aaPredicted RBP12.54□□□□□ -0.4
TRIM3-203ENST00000525074 ETV5P41161 510 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 ETV1P50549 477 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 RAB8AP61006 207 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 ABRQ12979 859 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 MRPL28Q13084 256 aaKnown RBP12.54□□□□□ -0.4
TRIM3-203ENST00000525074 ZNF267Q14586 743 aaPredicted RBP12.54□□□□□ -0.4
TRIM3-203ENST00000525074 SEC23BQ15437 767 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 SLC5A12Q1EHB4 618 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 TCTN1Q2MV58 587 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 CCSMST1Q4G0I0 132 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 ATP13A5Q4VNC0 1218 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 FAM205BPQ63HN1 556 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 GPR155Q7Z3F1 870 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 LAS2Q8IYD9 372 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 SLC37A3Q8NCC5 494 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 OR4M2Q8NGB6 313 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 OR8J2Q8NGG1 315 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 UBTD2Q8WUN7 234 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 SCLYQ96I15 445 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 ING3Q9NXR8 418 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 COL4A4P53420 1690 aaPredicted RBP12.54□□□□□ -0.4
TRIM3-203ENST00000525074 GTPBP1O00178 669 aaKnown RBP12.54□□□□□ -0.4
TRIM3-203ENST00000525074 BTN3A3O00478 584 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 CD79BP40259 229 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 CSNK1DP48730 415 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 CTBP2P56545 445 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 CDK6Q00534 326 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 RBBP4Q09028 425 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 ZNF284Q2VY69 593 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 GCNT6Q5T4J0 391 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 CXorf57Q6NSI4 855 aaKnown RBP12.54□□□□□ -0.4
TRIM3-203ENST00000525074 CASP12Q6UXS9 341 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 DEF8Q6ZN54 512 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 OLIG3Q7RTU3 272 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 FAM9CQ8IZT9 166 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 APCDD1Q8J025 514 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 NXPE1Q8N323 547 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 DNAJC5GQ8N7S2 189 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 ANGPTL6Q8NI99 470 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 LRRC20Q8TCA0 184 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 POP5Q969H6 163 aaKnown RBP12.54□□□□□ -0.4
TRIM3-203ENST00000525074 QRFPRQ96P65 431 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 DCLRE1CQ96SD1 692 aaKnown RBP12.54□□□□□ -0.4
TRIM3-203ENST00000525074 SMG9Q9H0W8 520 aaKnown RBP12.54□□□□□ -0.4
TRIM3-203ENST00000525074 SGK2Q9HBY8 427 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 KCNN3Q9UGI6 736 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 REV3LO60673 3130 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 SCN10AQ9Y5Y9 1956 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 CLDN11O75508 207 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 SYPP08247 313 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 TRAPPC2P0DI81 140 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 TRAPPC2BP0DI82 140 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 LIM2P55344 173 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 C1DQ13901 141 aaKnown RBP12.54□□□□□ -0.4
TRIM3-203ENST00000525074 POU4F3Q15319 338 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 TOR1AIP1Q5JTV8 583 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 FUT10Q6P4F1 479 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 TMEM145Q8NBT3 493 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 ASIC4Q96FT7 647 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 MSANTD3Q96H12 275 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 WFDC6Q9BQY6 131 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 KATNB1Q9BVA0 655 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 MARCH5Q9NX47 278 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 CNOT2Q9NZN8 540 aaKnown RBP12.54□□□□□ -0.4
TRIM3-203ENST00000525074 GPR52Q9Y2T5 361 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 PRKAB1Q9Y478 270 aa12.54□□□□□ -0.4
TRIM3-203ENST00000525074 VWA8A3KMH1 1905 aa12.53□□□□□ -0.4
TRIM3-203ENST00000525074 TRPM7Q96QT4 1865 aa12.53□□□□□ -0.4
TRIM3-203ENST00000525074 FFAR1O14842 300 aa12.53□□□□□ -0.4
TRIM3-203ENST00000525074 CASKO14936 926 aa12.53□□□□□ -0.4
TRIM3-203ENST00000525074 FABP7O15540 132 aa12.53□□□□□ -0.4
TRIM3-203ENST00000525074 SEPT4O43236 478 aa12.53□□□□□ -0.4
TRIM3-203ENST00000525074 STC2O76061 302 aa12.53□□□□□ -0.4
TRIM3-203ENST00000525074 ARSBP15848 533 aa12.53□□□□□ -0.4
TRIM3-203ENST00000525074 IDSP22304 550 aa12.53□□□□□ -0.4
TRIM3-203ENST00000525074 MVDP53602 400 aa12.53□□□□□ -0.4
TRIM3-203ENST00000525074 B4GALNT1Q00973 533 aa12.53□□□□□ -0.4
TRIM3-203ENST00000525074 NAE1Q13564 534 aa12.53□□□□□ -0.4
TRIM3-203ENST00000525074 ESCO2Q56NI9 601 aa12.53□□□□□ -0.4
TRIM3-203ENST00000525074 RNASE12Q5GAN4 147 aaKnown RBP12.53□□□□□ -0.4
TRIM3-203ENST00000525074 TNFAIP8L2Q6P589 184 aaPredicted RBP12.53□□□□□ -0.4
TRIM3-203ENST00000525074 TRIM69Q86WT6 500 aa12.53□□□□□ -0.4
TRIM3-203ENST00000525074 HHIPQ96QV1 700 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms