RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 C17orf64Q86WR6 236 aa3.3□□□□□ -1.88
SKP1-212ENST00000523966 CNTN4Q8IWV2 1026 aa3.3□□□□□ -1.88
SKP1-212ENST00000523966 RTL3Q8N8U3 475 aaKnown RBP3.3□□□□□ -1.88
SKP1-212ENST00000523966 ICA1LQ8NDH6 482 aa3.3□□□□□ -1.88
SKP1-212ENST00000523966 NEK11Q8NG66 645 aa3.3□□□□□ -1.88
SKP1-212ENST00000523966 OR6F1Q8NGZ6 308 aa3.3□□□□□ -1.88
SKP1-212ENST00000523966 CD99L2Q8TCZ2 262 aa3.3□□□□□ -1.88
SKP1-212ENST00000523966 GTF3AQ92664 365 aaKnown RBP3.3□□□□□ -1.88
SKP1-212ENST00000523966 MOCOSQ96EN8 888 aa3.3□□□□□ -1.88
SKP1-212ENST00000523966 EPSTI1Q96J88 318 aa3.3□□□□□ -1.88
SKP1-212ENST00000523966 SLC45A3Q96JT2 553 aa3.3□□□□□ -1.88
SKP1-212ENST00000523966 CXorf58Q96LI9 332 aa3.3□□□□□ -1.88
SKP1-212ENST00000523966 ALKBH3Q96Q83 286 aaPredicted RBP3.3□□□□□ -1.88
SKP1-212ENST00000523966 ATP6V0BQ99437 205 aa3.3□□□□□ -1.88
SKP1-212ENST00000523966 S1PR3Q99500 378 aa3.3□□□□□ -1.88
SKP1-212ENST00000523966 SSX3Q99909 188 aa3.3□□□□□ -1.88
SKP1-212ENST00000523966 NTMT1Q9BV86 223 aa3.3□□□□□ -1.88
SKP1-212ENST00000523966 PINK1Q9BXM7 581 aa3.3□□□□□ -1.88
SKP1-212ENST00000523966 TRIM15Q9C019 465 aa3.3□□□□□ -1.88
SKP1-212ENST00000523966 STRADBQ9C0K7 418 aa3.3□□□□□ -1.88
SKP1-212ENST00000523966 GANQ9H2C0 597 aa3.3□□□□□ -1.88
SKP1-212ENST00000523966 DCLRE1BQ9H816 532 aa3.3□□□□□ -1.88
SKP1-212ENST00000523966 PLEKHA3Q9HB20 300 aa3.3□□□□□ -1.88
SKP1-212ENST00000523966 UBQLN2Q9UHD9 624 aa3.3□□□□□ -1.88
SKP1-212ENST00000523966 MUTYHQ9UIF7 546 aa3.3□□□□□ -1.88
SKP1-212ENST00000523966 MRTO4Q9UKD2 239 aaKnown RBP3.3□□□□□ -1.88
SKP1-212ENST00000523966 TSPAN16Q9UKR8 245 aa3.3□□□□□ -1.88
SKP1-212ENST00000523966 MRPS18CQ9Y3D5 142 aaKnown RBP3.3□□□□□ -1.88
SKP1-212ENST00000523966 PRSS21Q9Y6M0 314 aa3.3□□□□□ -1.88
SKP1-212ENST00000523966 RNF215Q9Y6U7 377 aa3.3□□□□□ -1.88
SKP1-212ENST00000523966 LRRC9Q6ZRR7 1453 aa3.29□□□□□ -1.88
SKP1-212ENST00000523966 PTPRGP23470 1445 aa3.29□□□□□ -1.88
SKP1-212ENST00000523966 CCNB3Q8WWL7 1395 aa3.29□□□□□ -1.88
SKP1-212ENST00000523966 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.29□□□□□ -1.881e-8■■■□□ 18.6
SKP1-212ENST00000523966 TRBV2A0A0J9YWF9 115 aa3.29□□□□□ -1.88
SKP1-212ENST00000523966 GLTPD2A6NH11 291 aa3.29□□□□□ -1.88
SKP1-212ENST00000523966 NEDD8-MDP1E9PL57 170 aa3.29□□□□□ -1.88
SKP1-212ENST00000523966 PDHXO00330 501 aa3.29□□□□□ -1.88
SKP1-212ENST00000523966 CHEK1O14757 476 aa3.29□□□□□ -1.88
SKP1-212ENST00000523966 TLX2O43763 284 aaPredicted RBP3.29□□□□□ -1.88
SKP1-212ENST00000523966 OR6A2O95222 327 aa3.29□□□□□ -1.88
SKP1-212ENST00000523966 CPNE6O95741 557 aa3.29□□□□□ -1.88
SKP1-212ENST00000523966 MT-ND3P03897 115 aa3.29□□□□□ -1.88
SKP1-212ENST00000523966 TPBGLP0DKB5 382 aa3.29□□□□□ -1.88
SKP1-212ENST00000523966 CT45A8P0DMV1 189 aa3.29□□□□□ -1.88
SKP1-212ENST00000523966 CT45A9P0DMV2 189 aa3.29□□□□□ -1.88
SKP1-212ENST00000523966 MBL2P11226 248 aaPredicted RBP3.29□□□□□ -1.88
SKP1-212ENST00000523966 PCP11498 1178 aaKnown RBP3.29□□□□□ -1.88
SKP1-212ENST00000523966 B4GALT1P15291 398 aa3.29□□□□□ -1.88
SKP1-212ENST00000523966 FHITP49789 147 aa3.29□□□□□ -1.88
SKP1-212ENST00000523966 TNFSF10P50591 281 aa3.29□□□□□ -1.88
SKP1-212ENST00000523966 CRYBA2P53672 197 aa3.29□□□□□ -1.88
SKP1-212ENST00000523966 PEX3P56589 373 aa3.29□□□□□ -1.88
SKP1-212ENST00000523966 HILS1P60008 231 aa3.29□□□□□ -1.88
SKP1-212ENST00000523966 CDKL1Q00532 357 aa3.29□□□□□ -1.88
SKP1-212ENST00000523966 MS4A2Q01362 244 aa3.29□□□□□ -1.88
SKP1-212ENST00000523966 CALCOCO2Q13137 446 aa3.29□□□□□ -1.88
SKP1-212ENST00000523966 MLF2Q15773 248 aaPredicted RBP3.29□□□□□ -1.88
SKP1-212ENST00000523966 CARTPTQ16568 116 aa3.29□□□□□ -1.88
SKP1-212ENST00000523966 CT45A2Q5DJT8 189 aa3.29□□□□□ -1.88
SKP1-212ENST00000523966 RTL6Q6ICC9 239 aa3.29□□□□□ -1.88
SKP1-212ENST00000523966 CAPN13Q6MZZ7 669 aaPredicted RBP3.29□□□□□ -1.88
SKP1-212ENST00000523966 ZNF613Q6PF04 617 aa3.29□□□□□ -1.88
SKP1-212ENST00000523966 DOK6Q6PKX4 331 aa3.29□□□□□ -1.88
SKP1-212ENST00000523966 ZNF730Q6ZMV8 503 aa3.29□□□□□ -1.88
SKP1-212ENST00000523966 GDPGP1Q6ZNW5 385 aa3.29□□□□□ -1.88
SKP1-212ENST00000523966 CATSPER3Q86XQ3 398 aa3.29□□□□□ -1.88
SKP1-212ENST00000523966 CACUL1Q86Y37 369 aa3.29□□□□□ -1.88
SKP1-212ENST00000523966 STHQ8IWL8 128 aa3.29□□□□□ -1.88
SKP1-212ENST00000523966 SFRP1Q8N474 314 aa3.29□□□□□ -1.88
SKP1-212ENST00000523966 AQP11Q8NBQ7 271 aa3.29□□□□□ -1.88
SKP1-212ENST00000523966 OR4A16Q8NH70 328 aa3.29□□□□□ -1.88
SKP1-212ENST00000523966 GOLGA5Q8TBA6 731 aa3.29□□□□□ -1.88
SKP1-212ENST00000523966 NPRL2Q8WTW4 380 aa3.29□□□□□ -1.88
SKP1-212ENST00000523966 PCNPQ8WW12 178 aaKnown RBP3.29□□□□□ -1.88
SKP1-212ENST00000523966 LIPHQ8WWY8 451 aa3.29□□□□□ -1.88
SKP1-212ENST00000523966 RPGRIP1Q96KN7 1286 aa3.29□□□□□ -1.88
SKP1-212ENST00000523966 RUFY1Q96T51 708 aa3.29□□□□□ -1.88
SKP1-212ENST00000523966 SPAG8Q99932 426 aaPredicted RBP3.29□□□□□ -1.88
SKP1-212ENST00000523966 AGPAT1Q99943 283 aa3.29□□□□□ -1.88
SKP1-212ENST00000523966 TRPV6Q9H1D0 765 aa3.29□□□□□ -1.88
SKP1-212ENST00000523966 ABCG8Q9H221 673 aa3.29□□□□□ -1.88
SKP1-212ENST00000523966 TMEM245Q9H330 911 aa3.29□□□□□ -1.88
SKP1-212ENST00000523966 PANK3Q9H999 370 aa3.29□□□□□ -1.88
SKP1-212ENST00000523966 FAM212BQ9NTI7 297 aaPredicted RBP3.29□□□□□ -1.88
SKP1-212ENST00000523966 ACOXLQ9NUZ1 547 aa3.29□□□□□ -1.88
SKP1-212ENST00000523966 VPS54Q9P1Q0 977 aa3.29□□□□□ -1.88
SKP1-212ENST00000523966 ERVK-18Q9QC07 812 aa3.29□□□□□ -1.88
SKP1-212ENST00000523966 AUP1Q9Y679 476 aa3.29□□□□□ -1.88
SKP1-212ENST00000523966 TIAM1Q13009 1591 aa3.29□□□□□ -1.88
SKP1-212ENST00000523966 DISP1Q96F81 1524 aa3.29□□□□□ -1.88
SKP1-212ENST00000523966 KIAA1217Q5T5P2 1943 aa3.29□□□□□ -1.88
SKP1-212ENST00000523966 RRBP1Q9P2E9 1410 aaKnown RBP3.28□□□□□ -1.88
SKP1-212ENST00000523966 SPAG9O60271 1321 aaKnown RBP3.28□□□□□ -1.88
SKP1-212ENST00000523966 IGHV4-30-2A0A087WSY4 118 aa3.28□□□□□ -1.88
SKP1-212ENST00000523966 OR5H15A6NDH6 313 aa3.28□□□□□ -1.88
SKP1-212ENST00000523966 SERINC4A6NH21 518 aa3.28□□□□□ -1.88
SKP1-212ENST00000523966 YJEFN3A6XGL0 299 aa3.28□□□□□ -1.88
SKP1-212ENST00000523966 A8MXK9 166 aa3.28□□□□□ -1.88
SKP1-212ENST00000523966 E9PQ18 207 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms