RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-223	ENST00000523125	SERTAD2	Q14140	314 aa		11.5	□□□□□ -0.57
VEGFA-223	ENST00000523125	C3AR1	Q16581	482 aa		11.5	□□□□□ -0.57
VEGFA-223	ENST00000523125	GLE1	Q53GS7	698 aa	Known RBP	11.5	□□□□□ -0.57
VEGFA-223	ENST00000523125	METTL2B	Q6P1Q9	378 aa	Known RBP	11.5	□□□□□ -0.57
VEGFA-223	ENST00000523125	KLC3	Q6P597	504 aa		11.5	□□□□□ -0.57
VEGFA-223	ENST00000523125	FGD2	Q7Z6J4	655 aa		11.5	□□□□□ -0.57
VEGFA-223	ENST00000523125	MYLK4	Q86YV6	388 aa	Predicted RBP	11.5	□□□□□ -0.57
VEGFA-223	ENST00000523125	SPPL2C	Q8IUH8	684 aa		11.5	□□□□□ -0.57
VEGFA-223	ENST00000523125	SULF2	Q8IWU5	870 aa		11.5	□□□□□ -0.57
VEGFA-223	ENST00000523125	CYP4Z2P	Q8N1L4	340 aa		11.5	□□□□□ -0.57
VEGFA-223	ENST00000523125	FAM98A	Q8NCA5	519 aa	Known RBP	11.5	□□□□□ -0.57
VEGFA-223	ENST00000523125	MNS1	Q8NEH6	495 aa		11.5	□□□□□ -0.57
VEGFA-223	ENST00000523125	OR14A16	Q8NHC5	309 aa		11.5	□□□□□ -0.57
VEGFA-223	ENST00000523125	WDR20	Q8TBZ3	569 aa		11.5	□□□□□ -0.57
VEGFA-223	ENST00000523125	DAZL	Q92904	295 aa	Known RBP	11.5	□□□□□ -0.57
VEGFA-223	ENST00000523125	TMEM125	Q96AQ2	219 aa		11.5	□□□□□ -0.57
VEGFA-223	ENST00000523125	ACTR8	Q9H981	624 aa		11.5	□□□□□ -0.57
VEGFA-223	ENST00000523125	MYOT	Q9UBF9	498 aa		11.5	□□□□□ -0.57
VEGFA-223	ENST00000523125	TINAG	Q9UJW2	476 aa		11.5	□□□□□ -0.57
VEGFA-223	ENST00000523125	KLF13	Q9Y2Y9	288 aa	Predicted RBP	11.5	□□□□□ -0.57
VEGFA-223	ENST00000523125	ATG4B	Q9Y4P1	393 aa		11.5	□□□□□ -0.57
VEGFA-223	ENST00000523125	TNPO3	Q9Y5L0	923 aa	Known RBP	11.5	□□□□□ -0.57
VEGFA-223	ENST00000523125	FBN2	P35556	2912 aa		11.5	□□□□□ -0.57
VEGFA-223	ENST00000523125	EXPH5	Q8NEV8	1989 aa		11.5	□□□□□ -0.57
VEGFA-223	ENST00000523125	PHF3	Q92576	2039 aa	Known RBP	11.5	□□□□□ -0.57
VEGFA-223	ENST00000523125	FREM3	P0C091	2139 aa		11.5	□□□□□ -0.57
VEGFA-223	ENST00000523125	NIN	Q8N4C6	2090 aa		11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	WASHC1	A8K0Z3	465 aa		11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	C17orf105	B2RV13	164 aa		11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	PROM1	O43490	865 aa		11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	PEX1	O43933	1283 aa		11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	ZNF354A	O60765	605 aa	Predicted RBP	11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	EED	O75530	441 aa	Known RBP	11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	PRKRA	O75569	313 aa	Known RBP	11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	OR6B1	O95007	311 aa		11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	MLYCD	O95822	493 aa		11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	RBP1	P09455	135 aa		11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	CTAGE8	P0CG41	777 aa		11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	ZNF24	P17028	368 aa		11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	PTX3	P26022	381 aa	Predicted RBP	11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	BSG	P35613	385 aa		11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	MEOX1	P50221	254 aa		11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	SERPINB9	P50453	376 aa		11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	SSR4	P51571	173 aa		11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	NEK2	P51955	445 aa		11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	HK2	P52789	917 aa		11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	ARFIP1	P53367	373 aa		11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	ADORA2A-AS1	P86434	159 aa		11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	HSF1	Q00613	529 aa		11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	CUL3	Q13618	768 aa		11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	CPSF6	Q16630	551 aa	Known RBP eCLIP	11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	C18orf63	Q68DL7	685 aa		11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	MRM1	Q6IN84	353 aa	Known RBP	11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	HSDL2	Q6YN16	418 aa		11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	DGAT2L6	Q6ZPD8	337 aa		11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	GPR180	Q86V85	440 aa		11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	CTAGE4	Q8IX94	777 aa		11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	OR4N5	Q8IXE1	308 aa		11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	ZCCHC7	Q8N3Z6	543 aa	Known RBP	11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	TMEM151A	Q8N4L1	468 aa		11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	TMEM156	Q8N614	296 aa		11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	PTGR2	Q8N8N7	351 aa	Predicted RBP	11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	ZFP62	Q8NB50	900 aa	Predicted RBP	11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	OR52B6	Q8NGF0	335 aa		11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	C16orf52	Q8NHV5	167 aa		11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	UHMK1	Q8TAS1	419 aa	Known RBP	11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	SLC2A12	Q8TD20	617 aa		11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	ZNF721	Q8TF20	911 aa		11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	SREK1	Q8WXA9	508 aa	Known RBP	11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	NSUN5	Q96P11	429 aa	Known RBP	11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	CDK15	Q96Q40	435 aa		11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	RASL10B	Q96S79	203 aa		11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	CCDC77	Q9BR77	488 aa		11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	OR8D2	Q9GZM6	311 aa		11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	RPF2	Q9H7B2	306 aa	Known RBP	11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	NOL11	Q9H8H0	719 aa	Known RBP	11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	ZBTB26	Q9HCK0	441 aa		11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	DEPP	Q9NTK1	212 aa		11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	PSD3	Q9NYI0	1048 aa		11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	SH3BGRL2	Q9UJC5	107 aa		11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	ZNF180	Q9UJW8	692 aa		11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	PCTP	Q9UKL6	214 aa		11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	ASB4	Q9Y574	426 aa		11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	SPACA6	W5XKT8	324 aa		11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125	TACC2	O95359	2948 aa		11.49	□□□□□ -0.57
VEGFA-223	ENST00000523125		A0A0A6YYD5	115 aa		11.48	□□□□□ -0.57
VEGFA-223	ENST00000523125		A0A1W2PR48	441 aa		11.48	□□□□□ -0.57
VEGFA-223	ENST00000523125	TRIM49D1	C9J1S8	452 aa		11.48	□□□□□ -0.57
VEGFA-223	ENST00000523125	POC1B-GALNT4	F8VUJ3	575 aa		11.48	□□□□□ -0.57
VEGFA-223	ENST00000523125	KLRC4-KLRK1	H3BQV0	150 aa		11.48	□□□□□ -0.57
VEGFA-223	ENST00000523125	STX16-NPEPL1	H3BU86	382 aa		11.48	□□□□□ -0.57
VEGFA-223	ENST00000523125	HRK	O00198	91 aa		11.48	□□□□□ -0.57
VEGFA-223	ENST00000523125	WWP2	O00308	870 aa		11.48	□□□□□ -0.57
VEGFA-223	ENST00000523125	FOXE1	O00358	373 aa	Predicted RBP	11.48	□□□□□ -0.57
VEGFA-223	ENST00000523125	STX16	O14662	325 aa		11.48	□□□□□ -0.57
VEGFA-223	ENST00000523125	TMPRSS11D	O60235	418 aa		11.48	□□□□□ -0.57
VEGFA-223	ENST00000523125	CLDN9	O95484	217 aa		11.48	□□□□□ -0.57
VEGFA-223	ENST00000523125	IGKV3-11	P04433	115 aa		11.48	□□□□□ -0.57
VEGFA-223	ENST00000523125	SBK3	P0C264	359 aa		11.48	□□□□□ -0.57
VEGFA-223	ENST00000523125	COL6A2	P12110	1019 aa		11.48	□□□□□ -0.57

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