RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 DAZLQ92904 295 aaKnown RBP14.28□□□□□ -0.12
MRPS28-209ENST00000522987 MCMBPQ9BTE3 642 aa14.28□□□□□ -0.12
MRPS28-209ENST00000522987 LDAHQ9H6V9 325 aa14.28□□□□□ -0.12
MRPS28-209ENST00000522987 EXO5Q9H790 373 aa14.28□□□□□ -0.12
MRPS28-209ENST00000522987 CNOT10Q9H9A5 744 aaKnown RBP14.28□□□□□ -0.12
MRPS28-209ENST00000522987 GPRC5BQ9NZH0 403 aa14.28□□□□□ -0.12
MRPS28-209ENST00000522987 VTI1BQ9UEU0 232 aa14.28□□□□□ -0.12
MRPS28-209ENST00000522987 MPDZO75970 2070 aa14.27□□□□□ -0.12
MRPS28-209ENST00000522987 SETD2Q9BYW2 2564 aaPredicted RBP14.27□□□□□ -0.13
MRPS28-209ENST00000522987 E7ESA3 106 aa14.27□□□□□ -0.13
MRPS28-209ENST00000522987 FGF17O60258 216 aa14.27□□□□□ -0.13
MRPS28-209ENST00000522987 S100BP04271 92 aaPredicted RBP14.27□□□□□ -0.13
MRPS28-209ENST00000522987 IGFBP2P18065 325 aa14.27□□□□□ -0.13
MRPS28-209ENST00000522987 CNR1P21554 472 aa14.27□□□□□ -0.13
MRPS28-209ENST00000522987 CPN2P22792 545 aa14.27□□□□□ -0.13
MRPS28-209ENST00000522987 ATP5A1P25705 553 aaKnown RBP14.27□□□□□ -0.13
MRPS28-209ENST00000522987 SSR2P43308 183 aa14.27□□□□□ -0.13
MRPS28-209ENST00000522987 KCNC1P48547 511 aa14.27□□□□□ -0.13
MRPS28-209ENST00000522987 POU4F1Q01851 419 aa14.27□□□□□ -0.13
MRPS28-209ENST00000522987 PRAMEF20Q5VT98 475 aa14.27□□□□□ -0.13
MRPS28-209ENST00000522987 SULT1C3Q6IMI6 304 aa14.27□□□□□ -0.13
MRPS28-209ENST00000522987 GK5Q6ZS86 529 aa14.27□□□□□ -0.13
MRPS28-209ENST00000522987 SLC22A16Q86VW1 577 aa14.27□□□□□ -0.13
MRPS28-209ENST00000522987 GPALPP1Q8IXQ4 340 aa14.27□□□□□ -0.13
MRPS28-209ENST00000522987 TCAIMQ8N3R3 496 aa14.27□□□□□ -0.13
MRPS28-209ENST00000522987 ACOT4Q8N9L9 421 aa14.27□□□□□ -0.13
MRPS28-209ENST00000522987 PYROXD1Q8WU10 500 aa14.27□□□□□ -0.13
MRPS28-209ENST00000522987 ANKRD9Q96BM1 317 aaPredicted RBP14.27□□□□□ -0.13
MRPS28-209ENST00000522987 TREX2Q9BQ50 279 aaPredicted RBP14.27□□□□□ -0.13
MRPS28-209ENST00000522987 FAM173AQ9BQD7 235 aa14.27□□□□□ -0.13
MRPS28-209ENST00000522987 ZNF559Q9BR84 538 aa14.27□□□□□ -0.13
MRPS28-209ENST00000522987 CAPS2Q9BXY5 557 aa14.27□□□□□ -0.13
MRPS28-209ENST00000522987 MS4A8Q9BY19 250 aa14.27□□□□□ -0.13
MRPS28-209ENST00000522987 OR51B5Q9H339 312 aa14.27□□□□□ -0.13
MRPS28-209ENST00000522987 ALG9Q9H6U8 611 aa14.27□□□□□ -0.13
MRPS28-209ENST00000522987 ZDHHC11Q9H8X9 412 aa14.27□□□□□ -0.13
MRPS28-209ENST00000522987 POPDC3Q9HBV1 291 aa14.27□□□□□ -0.13
MRPS28-209ENST00000522987 SACM1LQ9NTJ5 587 aa14.27□□□□□ -0.13
MRPS28-209ENST00000522987 NSMCE4AQ9NXX6 385 aa14.27□□□□□ -0.13
MRPS28-209ENST00000522987 TXNDC16Q9P2K2 825 aa14.27□□□□□ -0.13
MRPS28-209ENST00000522987 FAM215AQ9Y5M1 114 aa14.27□□□□□ -0.13
MRPS28-209ENST00000522987 SUPT3HB4E1H0 165 aa14.26□□□□□ -0.13
MRPS28-209ENST00000522987 UBXN8O00124 270 aa14.26□□□□□ -0.13
MRPS28-209ENST00000522987 SUPT3HO75486 399 aa14.26□□□□□ -0.13
MRPS28-209ENST00000522987 GLSO94925 669 aaPredicted RBP14.26□□□□□ -0.13
MRPS28-209ENST00000522987 P04436 131 aa14.26□□□□□ -0.13
MRPS28-209ENST00000522987 STMN1P16949 149 aa14.26□□□□□ -0.13
MRPS28-209ENST00000522987 ACVR2AP27037 513 aa14.26□□□□□ -0.13
MRPS28-209ENST00000522987 MSX1P28360 303 aa14.26□□□□□ -0.13
MRPS28-209ENST00000522987 MAN2A2P49641 1150 aa14.26□□□□□ -0.13
MRPS28-209ENST00000522987 TGM3Q08188 693 aa14.26□□□□□ -0.13
MRPS28-209ENST00000522987 DLG1Q12959 904 aa14.26□□□□□ -0.13
MRPS28-209ENST00000522987 SLMAPQ14BN4 828 aa14.26□□□□□ -0.13
MRPS28-209ENST00000522987 EFTUD2Q15029 972 aaKnown RBP eCLIP14.26□□□□□ -0.13
MRPS28-209ENST00000522987 HIST2H2ACQ16777 129 aaPredicted RBP14.26□□□□□ -0.13
MRPS28-209ENST00000522987 HIST2H2AA3Q6FI13 130 aa14.26□□□□□ -0.13
MRPS28-209ENST00000522987 RTL6Q6ICC9 239 aa14.26□□□□□ -0.13
MRPS28-209ENST00000522987 TRILQ7L0X0 811 aa14.26□□□□□ -0.13
MRPS28-209ENST00000522987 CMC1Q7Z7K0 106 aa14.26□□□□□ -0.13
MRPS28-209ENST00000522987 LIX1LQ8IVB5 337 aa14.26□□□□□ -0.13
MRPS28-209ENST00000522987 CTAGE3PQ8IX95 158 aa14.26□□□□□ -0.13
MRPS28-209ENST00000522987 DMRTC2Q8IXT2 367 aaPredicted RBP14.26□□□□□ -0.13
MRPS28-209ENST00000522987 ZNF721Q8TF20 911 aa14.26□□□□□ -0.13
MRPS28-209ENST00000522987 ZNF473Q8WTR7 871 aaKnown RBP14.26□□□□□ -0.13
MRPS28-209ENST00000522987 TSPAN17Q96FV3 270 aa14.26□□□□□ -0.13
MRPS28-209ENST00000522987 KCNC2Q96PR1 638 aa14.26□□□□□ -0.13
MRPS28-209ENST00000522987 RBBP8Q99708 897 aa14.26□□□□□ -0.13
MRPS28-209ENST00000522987 TTYH2Q9BSA4 534 aa14.26□□□□□ -0.13
MRPS28-209ENST00000522987 EFCAB11Q9BUY7 163 aa14.26□□□□□ -0.13
MRPS28-209ENST00000522987 IL1RL2Q9HB29 575 aa14.26□□□□□ -0.13
MRPS28-209ENST00000522987 PTBP2Q9UKA9 531 aaKnown RBP14.26□□□□□ -0.13
MRPS28-209ENST00000522987 ACAD8Q9UKU7 415 aa14.26□□□□□ -0.13
MRPS28-209ENST00000522987 PRRC2AP48634 2157 aaKnown RBP14.26□□□□□ -0.13
MRPS28-209ENST00000522987 MED12Q93074 2177 aa14.25□□□□□ -0.13
MRPS28-209ENST00000522987 A0A0G2JNJ9 132 aa14.25□□□□□ -0.13
MRPS28-209ENST00000522987 WASHC1A8K0Z3 465 aa14.25□□□□□ -0.13
MRPS28-209ENST00000522987 GLI4P10075 376 aa14.25□□□□□ -0.13
MRPS28-209ENST00000522987 HIST1H1TP22492 207 aaPredicted RBP14.25□□□□□ -0.13
MRPS28-209ENST00000522987 GSTM2P28161 218 aa14.25□□□□□ -0.13
MRPS28-209ENST00000522987 GGT5P36269 586 aa14.25□□□□□ -0.13
MRPS28-209ENST00000522987 ADH7P40394 386 aa14.25□□□□□ -0.13
MRPS28-209ENST00000522987 TRPC1P48995 793 aa14.25□□□□□ -0.13
MRPS28-209ENST00000522987 ART1P52961 327 aa14.25□□□□□ -0.13
MRPS28-209ENST00000522987 SLAMF1Q13291 335 aa14.25□□□□□ -0.13
MRPS28-209ENST00000522987 SERTAD2Q14140 314 aa14.25□□□□□ -0.13
MRPS28-209ENST00000522987 RCN2Q14257 317 aa14.25□□□□□ -0.13
MRPS28-209ENST00000522987 AP5B1Q2VPB7 878 aa14.25□□□□□ -0.13
MRPS28-209ENST00000522987 C18orf63Q68DL7 685 aa14.25□□□□□ -0.13
MRPS28-209ENST00000522987 ACAD11Q709F0 780 aa14.25□□□□□ -0.13
MRPS28-209ENST00000522987 MYLK4Q86YV6 388 aaPredicted RBP14.25□□□□□ -0.13
MRPS28-209ENST00000522987 C9orf40Q8IXQ3 194 aa14.25□□□□□ -0.13
MRPS28-209ENST00000522987 FAM109AQ8N4B1 249 aa14.25□□□□□ -0.13
MRPS28-209ENST00000522987 PDPRQ8NCN5 879 aa14.25□□□□□ -0.13
MRPS28-209ENST00000522987 KIAA1191Q96A73 305 aa14.25□□□□□ -0.13
MRPS28-209ENST00000522987 JSRP1Q96MG2 331 aaPredicted RBP14.25□□□□□ -0.13
MRPS28-209ENST00000522987 DGAT2Q96PD7 388 aa14.25□□□□□ -0.13
MRPS28-209ENST00000522987 GAL3ST4Q96RP7 486 aa14.25□□□□□ -0.13
MRPS28-209ENST00000522987 GPR22Q99680 433 aa14.25□□□□□ -0.13
MRPS28-209ENST00000522987 TBCDQ9BTW9 1192 aa14.25□□□□□ -0.13
MRPS28-209ENST00000522987 CD244Q9BZW8 370 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms