RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 TLR1Q15399 786 aa12.61□□□□□ -0.39
CLK4-210ENST00000522136 NKAIN1Q4KMZ8 207 aa12.61□□□□□ -0.39
CLK4-210ENST00000522136 ZNF385CQ66K41 422 aaPredicted RBP12.61□□□□□ -0.39
CLK4-210ENST00000522136 SLC48A1Q6P1K1 146 aa12.61□□□□□ -0.39
CLK4-210ENST00000522136 COX15Q7KZN9 410 aa12.61□□□□□ -0.39
CLK4-210ENST00000522136 R3HCC1LQ7Z5L2 792 aaKnown RBP12.61□□□□□ -0.39
CLK4-210ENST00000522136 RETREG3Q86VR2 466 aa12.61□□□□□ -0.39
CLK4-210ENST00000522136 ANKRD46Q86W74 232 aa12.61□□□□□ -0.39
CLK4-210ENST00000522136 TMEM151BQ8IW70 566 aa12.61□□□□□ -0.39
CLK4-210ENST00000522136 CACTIN-AS1Q8N1I8 211 aa12.61□□□□□ -0.39
CLK4-210ENST00000522136 RP9Q8TA86 221 aaKnown RBP12.61□□□□□ -0.39
CLK4-210ENST00000522136 DNAJB14Q8TBM8 379 aa12.61□□□□□ -0.39
CLK4-210ENST00000522136 RCN3Q96D15 328 aa12.61□□□□□ -0.39
CLK4-210ENST00000522136 CMTM5Q96DZ9 223 aa12.61□□□□□ -0.39
CLK4-210ENST00000522136 OR52E6Q96RD3 313 aa12.61□□□□□ -0.39
CLK4-210ENST00000522136 NPAS2Q99743 824 aa12.61□□□□□ -0.39
CLK4-210ENST00000522136 DUSP26Q9BV47 211 aa12.61□□□□□ -0.39
CLK4-210ENST00000522136 MS4A12Q9NXJ0 267 aa12.61□□□□□ -0.39
CLK4-210ENST00000522136 FOXJ2Q9P0K8 574 aa12.61□□□□□ -0.39
CLK4-210ENST00000522136 MAP4K5Q9Y4K4 846 aa12.61□□□□□ -0.39
CLK4-210ENST00000522136 MEN1O00255 615 aa12.61□□□□□ -0.39
CLK4-210ENST00000522136 LDB3O75112 727 aa12.61□□□□□ -0.39
CLK4-210ENST00000522136 ERAL1O75616 437 aaKnown RBP12.61□□□□□ -0.39
CLK4-210ENST00000522136 TNFSF15O95150 251 aa12.61□□□□□ -0.39
CLK4-210ENST00000522136 IL6P05231 212 aa12.61□□□□□ -0.39
CLK4-210ENST00000522136 HBQ1P09105 142 aa12.61□□□□□ -0.39
CLK4-210ENST00000522136 ESRRAP11474 423 aaPredicted RBP12.61□□□□□ -0.39
CLK4-210ENST00000522136 PCSK2P16519 638 aa12.61□□□□□ -0.39
CLK4-210ENST00000522136 PRDX6P30041 224 aa12.61□□□□□ -0.39
CLK4-210ENST00000522136 TLX1P31314 330 aaPredicted RBP12.61□□□□□ -0.39
CLK4-210ENST00000522136 KIR3DL1P43629 444 aa12.61□□□□□ -0.39
CLK4-210ENST00000522136 DCDP81605 110 aaKnown RBP12.61□□□□□ -0.39
CLK4-210ENST00000522136 SRSF11Q05519 484 aaKnown RBP12.61□□□□□ -0.39
CLK4-210ENST00000522136 ACTN3Q08043 901 aaPredicted RBP12.61□□□□□ -0.39
CLK4-210ENST00000522136 VWA2Q5GFL6 755 aa12.61□□□□□ -0.39
CLK4-210ENST00000522136 PAGE3Q5JUK9 113 aa12.61□□□□□ -0.39
CLK4-210ENST00000522136 FAM199XQ6PEV8 388 aaPredicted RBP12.61□□□□□ -0.39
CLK4-210ENST00000522136 SLC2A7Q6PXP3 512 aa12.61□□□□□ -0.39
CLK4-210ENST00000522136 PRSS58Q8IYP2 241 aa12.61□□□□□ -0.39
CLK4-210ENST00000522136 GALNT6Q8NCL4 622 aa12.61□□□□□ -0.39
CLK4-210ENST00000522136 FBXO27Q8NI29 283 aa12.61□□□□□ -0.39
CLK4-210ENST00000522136 MTERF3Q96E29 417 aa12.61□□□□□ -0.39
CLK4-210ENST00000522136 PRPF18Q99633 342 aaKnown RBP12.61□□□□□ -0.39
CLK4-210ENST00000522136 SLC25A23Q9BV35 468 aa12.61□□□□□ -0.39
CLK4-210ENST00000522136 WDR41Q9HAD4 459 aa12.61□□□□□ -0.39
CLK4-210ENST00000522136 TMEM45AQ9NWC5 275 aa12.61□□□□□ -0.39
CLK4-210ENST00000522136 CTSFQ9UBX1 484 aa12.61□□□□□ -0.39
CLK4-210ENST00000522136 UTS2RQ9UKP6 389 aa12.61□□□□□ -0.39
CLK4-210ENST00000522136 SPACA6W5XKT8 324 aa12.61□□□□□ -0.39
CLK4-210ENST00000522136 SDK2Q58EX2 2172 aa12.61□□□□□ -0.39
CLK4-210ENST00000522136 A0A1W2PP18 115 aa12.6□□□□□ -0.39
CLK4-210ENST00000522136 ERICH4A6NGS2 130 aa12.6□□□□□ -0.39
CLK4-210ENST00000522136 AIM2O14862 343 aa12.6□□□□□ -0.39
CLK4-210ENST00000522136 SCN2BO60939 215 aa12.6□□□□□ -0.39
CLK4-210ENST00000522136 STK17BO94768 372 aa12.6□□□□□ -0.39
CLK4-210ENST00000522136 PTGER1P34995 402 aa12.6□□□□□ -0.39
CLK4-210ENST00000522136 BTG2P78543 158 aa12.6□□□□□ -0.39
CLK4-210ENST00000522136 DUSP2Q05923 314 aa12.6□□□□□ -0.39
CLK4-210ENST00000522136 BNIP1Q12981 228 aa12.6□□□□□ -0.39
CLK4-210ENST00000522136 MAPRE2Q15555 327 aa12.6□□□□□ -0.39
CLK4-210ENST00000522136 ZSCAN26Q16670 478 aa12.6□□□□□ -0.39
CLK4-210ENST00000522136 REP15Q6BDI9 236 aa12.6□□□□□ -0.39
CLK4-210ENST00000522136 TMPRSS7Q7RTY8 843 aa12.6□□□□□ -0.39
CLK4-210ENST00000522136 CAMKMTQ7Z624 323 aa12.6□□□□□ -0.39
CLK4-210ENST00000522136 CLECL1Q8IZS7 167 aa12.6□□□□□ -0.39
CLK4-210ENST00000522136 OR8J2Q8NGG1 315 aa12.6□□□□□ -0.39
CLK4-210ENST00000522136 STARD8Q92502 1023 aa12.6□□□□□ -0.39
CLK4-210ENST00000522136 TBC1D20Q96BZ9 403 aa12.6□□□□□ -0.39
CLK4-210ENST00000522136 MIEF2Q96C03 454 aa12.6□□□□□ -0.39
CLK4-210ENST00000522136 KLHL29Q96CT2 875 aa12.6□□□□□ -0.39
CLK4-210ENST00000522136 DDA1Q9BW61 102 aa12.6□□□□□ -0.39
CLK4-210ENST00000522136 CLK4Q9HAZ1 481 aaKnown RBP12.6□□□□□ -0.39
CLK4-210ENST00000522136 SLAMF7Q9NQ25 335 aa12.6□□□□□ -0.39
CLK4-210ENST00000522136 SLC35C2Q9NQQ7 365 aa12.6□□□□□ -0.39
CLK4-210ENST00000522136 MAP10Q9P2G4 905 aa12.6□□□□□ -0.39
CLK4-210ENST00000522136 MAPRE3Q9UPY8 281 aa12.6□□□□□ -0.39
CLK4-210ENST00000522136 NDUFAF1Q9Y375 327 aa12.6□□□□□ -0.39
CLK4-210ENST00000522136 CFLARO15519 480 aa12.6□□□□□ -0.39
CLK4-210ENST00000522136 FGF17O60258 216 aa12.6□□□□□ -0.39
CLK4-210ENST00000522136 RPL3P39023 403 aaKnown RBP12.6□□□□□ -0.39
CLK4-210ENST00000522136 FEN1P39748 380 aaKnown RBP12.6□□□□□ -0.39
CLK4-210ENST00000522136 DPY19L1Q2PZI1 675 aa12.6□□□□□ -0.39
CLK4-210ENST00000522136 MMEL1Q495T6 779 aa12.6□□□□□ -0.39
CLK4-210ENST00000522136 SHISA6Q6ZSJ9 500 aa12.6□□□□□ -0.39
CLK4-210ENST00000522136 CCDC121Q6ZUS5 278 aa12.6□□□□□ -0.39
CLK4-210ENST00000522136 LAPTM4BQ86VI4 370 aa12.6□□□□□ -0.39
CLK4-210ENST00000522136 ZC3H7AQ8IWR0 971 aaKnown RBP12.6□□□□□ -0.39
CLK4-210ENST00000522136 GALNT15Q8N3T1 639 aa12.6□□□□□ -0.39
CLK4-210ENST00000522136 TSPEARQ8WU66 669 aa12.6□□□□□ -0.39
CLK4-210ENST00000522136 CNRIP1Q96F85 164 aaPredicted RBP12.6□□□□□ -0.39
CLK4-210ENST00000522136 INPP5KQ9BT40 448 aa12.6□□□□□ -0.39
CLK4-210ENST00000522136 ASPSCR1Q9BZE9 553 aa12.6□□□□□ -0.39
CLK4-210ENST00000522136 IL1RL2Q9HB29 575 aa12.6□□□□□ -0.39
CLK4-210ENST00000522136 LANCL2Q9NS86 450 aa12.6□□□□□ -0.39
CLK4-210ENST00000522136 TAS2R7Q9NYW3 318 aa12.6□□□□□ -0.39
CLK4-210ENST00000522136 EHD3Q9NZN3 535 aa12.6□□□□□ -0.39
CLK4-210ENST00000522136 SLAMF8Q9P0V8 285 aa12.6□□□□□ -0.39
CLK4-210ENST00000522136 ERVK-11Q9UQG0 969 aa12.6□□□□□ -0.39
CLK4-210ENST00000522136 SPTBN2O15020 2390 aa12.59□□□□□ -0.39
CLK4-210ENST00000522136 TGFBR3LH3BV60 316 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms