RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 RPF2Q9H7B2 306 aaKnown RBP19.29■□□□□ 0.68
TRIM35-203ENST00000521253 ROPN1Q9HAT0 212 aaPredicted RBP19.29■□□□□ 0.68
TRIM35-203ENST00000521253 LYARQ9NX58 379 aaKnown RBP19.29■□□□□ 0.68
TRIM35-203ENST00000521253 VTI1BQ9UEU0 232 aa19.29■□□□□ 0.68
TRIM35-203ENST00000521253 RAB21Q9UL25 225 aa19.29■□□□□ 0.68
TRIM35-203ENST00000521253 PPIEQ9UNP9 301 aaKnown RBP19.29■□□□□ 0.68
TRIM35-203ENST00000521253 SLC12A4Q9UP95 1085 aa19.29■□□□□ 0.68
TRIM35-203ENST00000521253 ASB4Q9Y574 426 aa19.29■□□□□ 0.68
TRIM35-203ENST00000521253 TRAV17A0A0B4J275 112 aa19.28■□□□□ 0.68
TRIM35-203ENST00000521253 SYNDIG1LA6NDD5 238 aa19.28■□□□□ 0.68
TRIM35-203ENST00000521253 OR5H15A6NDH6 313 aa19.28■□□□□ 0.68
TRIM35-203ENST00000521253 PROM1O43490 865 aa19.28■□□□□ 0.68
TRIM35-203ENST00000521253 FGF17O60258 216 aa19.28■□□□□ 0.68
TRIM35-203ENST00000521253 PRKRAO75569 313 aaKnown RBP19.28■□□□□ 0.68
TRIM35-203ENST00000521253 FAM58BPP0C7Q3 252 aa19.28■□□□□ 0.68
TRIM35-203ENST00000521253 ST13P50502 369 aaKnown RBP19.28■□□□□ 0.68
TRIM35-203ENST00000521253 SERTAD2Q14140 314 aa19.28■□□□□ 0.68
TRIM35-203ENST00000521253 ELAVL1Q15717 326 aaKnown RBP19.28■□□□□ 0.68
TRIM35-203ENST00000521253 CYP20A1Q6UW02 462 aa19.28■□□□□ 0.68
TRIM35-203ENST00000521253 TRABD2AQ86V40 505 aa19.28■□□□□ 0.68
TRIM35-203ENST00000521253 OR4N5Q8IXE1 308 aa19.28■□□□□ 0.68
TRIM35-203ENST00000521253 CCDC63Q8NA47 563 aa19.28■□□□□ 0.68
TRIM35-203ENST00000521253 RDH11Q8TC12 318 aa19.28■□□□□ 0.68
TRIM35-203ENST00000521253 HBEGFQ99075 208 aa19.28■□□□□ 0.68
TRIM35-203ENST00000521253 SLC29A3Q9BZD2 475 aa19.28■□□□□ 0.68
TRIM35-203ENST00000521253 ASF1BQ9NVP2 202 aa19.28■□□□□ 0.68
TRIM35-203ENST00000521253 STK38LQ9Y2H1 464 aa19.28■□□□□ 0.68
TRIM35-203ENST00000521253 NTNG1Q9Y2I2 539 aa19.28■□□□□ 0.68
TRIM35-203ENST00000521253 COPG1Q9Y678 874 aaKnown RBP19.28■□□□□ 0.68
TRIM35-203ENST00000521253 TRBV11-1A0A0K0K1C0 115 aa19.27■□□□□ 0.68
TRIM35-203ENST00000521253 A0A1W2PR48 441 aa19.27■□□□□ 0.68
TRIM35-203ENST00000521253 MANBAO00462 879 aa19.27■□□□□ 0.68
TRIM35-203ENST00000521253 VPS4BO75351 444 aa19.27■□□□□ 0.68
TRIM35-203ENST00000521253 CPA3P15088 417 aa19.27■□□□□ 0.68
TRIM35-203ENST00000521253 TLX1P31314 330 aaPredicted RBP19.27■□□□□ 0.68
TRIM35-203ENST00000521253 BUD31P41223 144 aaPredicted RBP19.27■□□□□ 0.68
TRIM35-203ENST00000521253 GPR143P51810 404 aa19.27■□□□□ 0.68
TRIM35-203ENST00000521253 PKNOX1P55347 436 aa19.27■□□□□ 0.68
TRIM35-203ENST00000521253 RPS19BP1Q86WX3 136 aaKnown RBP19.27■□□□□ 0.68
TRIM35-203ENST00000521253 LGI4Q8N135 537 aa19.27■□□□□ 0.68
TRIM35-203ENST00000521253 METTL4Q8N3J2 472 aa19.27■□□□□ 0.68
TRIM35-203ENST00000521253 GALNT11Q8NCW6 608 aa19.27■□□□□ 0.68
TRIM35-203ENST00000521253 METTL6Q8TCB7 284 aa19.27■□□□□ 0.68
TRIM35-203ENST00000521253 PTPMT1Q8WUK0 201 aaPredicted RBP19.27■□□□□ 0.68
TRIM35-203ENST00000521253 TANKQ92844 425 aa19.27■□□□□ 0.68
TRIM35-203ENST00000521253 NCLNQ969V3 563 aa19.27■□□□□ 0.68
TRIM35-203ENST00000521253 DEFB126Q9BYW3 111 aa19.27■□□□□ 0.68
TRIM35-203ENST00000521253 CDCP1Q9H5V8 836 aa19.27■□□□□ 0.68
TRIM35-203ENST00000521253 BRF2Q9HAW0 419 aa19.27■□□□□ 0.68
TRIM35-203ENST00000521253 MKS1Q9NXB0 559 aa19.27■□□□□ 0.68
TRIM35-203ENST00000521253 AHSPQ9NZD4 102 aa19.27■□□□□ 0.68
TRIM35-203ENST00000521253 ABI3Q9P2A4 366 aa19.27■□□□□ 0.68
TRIM35-203ENST00000521253 ZNF223Q9UK11 482 aaPredicted RBP19.27■□□□□ 0.68
TRIM35-203ENST00000521253 VPS4AQ9UN37 437 aa19.27■□□□□ 0.68
TRIM35-203ENST00000521253 CLCA3PQ9Y6N3 262 aa19.27■□□□□ 0.68
TRIM35-203ENST00000521253 ZIC2O95409 532 aaPredicted RBP19.26■□□□□ 0.67
TRIM35-203ENST00000521253 KRT6AP02538 564 aa19.26■□□□□ 0.67
TRIM35-203ENST00000521253 KRT6BP04259 564 aa19.26■□□□□ 0.67
TRIM35-203ENST00000521253 KLK1P06870 262 aa19.26■□□□□ 0.67
TRIM35-203ENST00000521253 NR2F6P10588 404 aa19.26■□□□□ 0.67
TRIM35-203ENST00000521253 TPP2P29144 1249 aaPredicted RBP19.26■□□□□ 0.67
TRIM35-203ENST00000521253 KRT6CP48668 564 aa19.26■□□□□ 0.67
TRIM35-203ENST00000521253 CLCN2P51788 898 aa19.26■□□□□ 0.67
TRIM35-203ENST00000521253 NAGLUP54802 743 aa19.26■□□□□ 0.67
TRIM35-203ENST00000521253 DNAJB13P59910 316 aa19.26■□□□□ 0.67
TRIM35-203ENST00000521253 IGLV3-21P80748 117 aaPredicted RBP19.26■□□□□ 0.67
TRIM35-203ENST00000521253 FOLH1Q04609 750 aa19.26■□□□□ 0.67
TRIM35-203ENST00000521253 TUBA3CQ13748 450 aa19.26■□□□□ 0.67
TRIM35-203ENST00000521253 TUBA3EQ6PEY2 450 aa19.26■□□□□ 0.67
TRIM35-203ENST00000521253 SRRM1Q8IYB3 904 aaKnown RBP19.26■□□□□ 0.67
TRIM35-203ENST00000521253 TMEM132CQ8N3T6 1108 aa19.26■□□□□ 0.67
TRIM35-203ENST00000521253 BANPQ8N9N5 519 aa19.26■□□□□ 0.67
TRIM35-203ENST00000521253 OR14A16Q8NHC5 309 aa19.26■□□□□ 0.67
TRIM35-203ENST00000521253 AGAP11Q8TF27 550 aa19.26■□□□□ 0.67
TRIM35-203ENST00000521253 VMP1Q96GC9 406 aa19.26■□□□□ 0.67
TRIM35-203ENST00000521253 APOPT1Q96IL0 206 aa19.26■□□□□ 0.67
TRIM35-203ENST00000521253 BARD1Q99728 777 aaKnown RBP19.26■□□□□ 0.67
TRIM35-203ENST00000521253 OXSMQ9NWU1 459 aa19.26■□□□□ 0.67
TRIM35-203ENST00000521253 ANKRD10Q9NXR5 420 aa19.26■□□□□ 0.67
TRIM35-203ENST00000521253 ADAM29Q9UKF5 820 aa19.26■□□□□ 0.67
TRIM35-203ENST00000521253 PLLPQ9Y342 182 aa19.26■□□□□ 0.67
TRIM35-203ENST00000521253 CPAMD8Q8IZJ3 1885 aa19.26■□□□□ 0.67
TRIM35-203ENST00000521253 SHANK1Q9Y566 2161 aa19.25■□□□□ 0.67
TRIM35-203ENST00000521253 WASHC1A8K0Z3 465 aa19.25■□□□□ 0.67
TRIM35-203ENST00000521253 GABRR3A8MPY1 467 aa19.25■□□□□ 0.67
TRIM35-203ENST00000521253 TCP11X1B4DZS4 312 aa19.25■□□□□ 0.67
TRIM35-203ENST00000521253 UBFD1O14562 309 aaKnown RBP19.25■□□□□ 0.67
TRIM35-203ENST00000521253 ESRRBO95718 433 aa19.25■□□□□ 0.67
TRIM35-203ENST00000521253 AIFM1O95831 613 aa19.25■□□□□ 0.67
TRIM35-203ENST00000521253 ENO1P06733 434 aaKnown RBP19.25■□□□□ 0.67
TRIM35-203ENST00000521253 HMOX2P30519 316 aa19.25■□□□□ 0.67
TRIM35-203ENST00000521253 CD96P40200 585 aa19.25■□□□□ 0.67
TRIM35-203ENST00000521253 UQCRFS1P47985 274 aa19.25■□□□□ 0.67
TRIM35-203ENST00000521253 HTR6P50406 440 aa19.25■□□□□ 0.67
TRIM35-203ENST00000521253 GALNT1Q10472 559 aaPredicted RBP19.25■□□□□ 0.67
TRIM35-203ENST00000521253 TBL3Q12788 808 aaKnown RBP19.25■□□□□ 0.67
TRIM35-203ENST00000521253 RPUSD3Q6P087 351 aaKnown RBP19.25■□□□□ 0.67
TRIM35-203ENST00000521253 FRMD7Q6ZUT3 714 aa19.25■□□□□ 0.67
TRIM35-203ENST00000521253 PAGE2Q7Z2X7 111 aa19.25■□□□□ 0.67
TRIM35-203ENST00000521253 COMMD6Q7Z4G1 85 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms