RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 CDH7Q9ULB5 785 aa3.76□□□□□ -1.81
CLK4-207ENST00000520909 HPCAL4Q9UM19 191 aa3.76□□□□□ -1.81
CLK4-207ENST00000520909 TTLL3Q9Y4R7 772 aa3.76□□□□□ -1.81
CLK4-207ENST00000520909 MTCH2Q9Y6C9 303 aa3.76□□□□□ -1.81
CLK4-207ENST00000520909 COL4A4P53420 1690 aaPredicted RBP3.76□□□□□ -1.81
CLK4-207ENST00000520909 MTCL1Q9Y4B5 1905 aaKnown RBP3.75□□□□□ -1.81
CLK4-207ENST00000520909 HEPACAM2A8MVW5 462 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 NEDD8-MDP1E9PL57 170 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 H3BQ06 376 aaPredicted RBP3.75□□□□□ -1.81
CLK4-207ENST00000520909 CHADO15335 359 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 PSMD3O43242 534 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 KDELR3O43731 214 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 SNAP91O60641 907 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 PRAMEF11O60813 436 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 TBX10O75333 385 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 AVILO75366 819 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 TMEM63AO94886 807 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 LUC7L3O95232 432 aaKnown RBP3.75□□□□□ -1.81
CLK4-207ENST00000520909 HLA-DQB2P05538 268 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 G6PDP11413 515 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 HSD17B3P37058 310 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 HSPA9P38646 679 aaKnown RBP3.75□□□□□ -1.81
CLK4-207ENST00000520909 CSKP41240 450 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 MTHFRP42898 656 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 MAGEA4P43358 317 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 CLK1P49759 484 aaKnown RBP3.75□□□□□ -1.81
CLK4-207ENST00000520909 ARL4CP56559 192 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 IL10RBQ08334 325 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 SLC10A7Q0GE19 358 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 PDIA2Q13087 525 aaKnown RBP3.75□□□□□ -1.81
CLK4-207ENST00000520909 ZNF235Q14590 738 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 KCNJ11Q14654 390 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 CASP8Q14790 479 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 SLMAPQ14BN4 828 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 DNAJC21Q5F1R6 531 aaKnown RBP3.75□□□□□ -1.81
CLK4-207ENST00000520909 MPP7Q5T2T1 576 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 CFAP58Q5T655 872 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 MARC1Q5VT66 337 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 SPINK14Q6IE38 97 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 LINGO4Q6UY18 593 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 PPP1R21Q6ZMI0 780 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 ASB18Q6ZVZ8 466 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 CENPUQ71F23 418 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 HOOK3Q86VS8 718 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 APCDD1Q8J025 514 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 PDIK1LQ8N165 341 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 BBS5Q8N3I7 341 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 NAT8LQ8N9F0 302 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 FIBINQ8TAL6 211 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 WDR20Q8TBZ3 569 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 WFDC5Q8TCV5 224 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 UBLCP1Q8WVY7 318 aaPredicted RBP3.75□□□□□ -1.81
CLK4-207ENST00000520909 TMEM190Q8WZ59 177 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 PRCCQ92733 491 aaPredicted RBP3.75□□□□□ -1.81
CLK4-207ENST00000520909 EXOC4Q96A65 974 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 OTUB2Q96DC9 234 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 SCRN2Q96FV2 425 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 LINC00479Q96M42 142 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 MYADMQ96S97 322 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 VAT1Q99536 393 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 IL12RB2Q99665 862 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 BBS2Q9BXC9 721 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 SLC25A51Q9H1U9 297 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 GBA3Q9H227 469 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 SLC32A1Q9H598 525 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 TRPV4Q9HBA0 871 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 ZFP14Q9HCL3 533 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 SAYSD1Q9NPB0 183 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 SPHK2Q9NRA0 654 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 ABCB8Q9NUT2 735 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 ZNF446Q9NWS9 450 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 ZNF624Q9P2J8 865 aaPredicted RBP3.75□□□□□ -1.81
CLK4-207ENST00000520909 UBA2Q9UBT2 640 aaPredicted RBP3.75□□□□□ -1.81
CLK4-207ENST00000520909 VPS28Q9UK41 221 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 CLEC4EQ9ULY5 219 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 CARD8Q9Y2G2 431 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 OR51B4Q9Y5P0 310 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 BRWD1Q9NSI6 2320 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 ANAPC1Q9H1A4 1944 aa3.75□□□□□ -1.81
CLK4-207ENST00000520909 CDH23Q9H251 3354 aa3.74□□□□□ -1.81
CLK4-207ENST00000520909 IGLV5-45A0A087WSX0 123 aa3.74□□□□□ -1.81
CLK4-207ENST00000520909 STX16-NPEPL1H3BU86 382 aa3.74□□□□□ -1.81
CLK4-207ENST00000520909 STX16O14662 325 aa3.74□□□□□ -1.81
CLK4-207ENST00000520909 ALOX15BO15296 676 aa3.74□□□□□ -1.81
CLK4-207ENST00000520909 BANF1O75531 89 aa3.74□□□□□ -1.81
CLK4-207ENST00000520909 ZMPSTE24O75844 475 aa3.74□□□□□ -1.81
CLK4-207ENST00000520909 ANXA9O76027 345 aa3.74□□□□□ -1.81
CLK4-207ENST00000520909 ACSL3O95573 720 aa3.74□□□□□ -1.81
CLK4-207ENST00000520909 AP2A1O95782 977 aa3.74□□□□□ -1.81
CLK4-207ENST00000520909 MT-CYBP00156 380 aaPredicted RBP3.74□□□□□ -1.81
CLK4-207ENST00000520909 AGTP01019 485 aa3.74□□□□□ -1.81
CLK4-207ENST00000520909 PENKP01210 267 aaPredicted RBP3.74□□□□□ -1.81
CLK4-207ENST00000520909 LAMP2P13473 410 aa3.74□□□□□ -1.81
CLK4-207ENST00000520909 ETFAP13804 333 aa3.74□□□□□ -1.81
CLK4-207ENST00000520909 TPSB2P20231 275 aa3.74□□□□□ -1.81
CLK4-207ENST00000520909 FCARP24071 287 aa3.74□□□□□ -1.81
CLK4-207ENST00000520909 CD70P32970 193 aa3.74□□□□□ -1.81
CLK4-207ENST00000520909 DCTP40126 519 aa3.74□□□□□ -1.81
CLK4-207ENST00000520909 EIF2S3P41091 472 aaKnown RBP3.74□□□□□ -1.81
CLK4-207ENST00000520909 CD86P42081 329 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms