RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 MFSD4BQ5TF39 518 aa14.43□□□□□ -0.1
LSM1-203ENST00000520755 GKAP1Q5VSY0 366 aaPredicted RBP14.43□□□□□ -0.1
LSM1-203ENST00000520755 FAM71E1Q6IPT2 247 aa14.43□□□□□ -0.1
LSM1-203ENST00000520755 ZC3H7AQ8IWR0 971 aaKnown RBP14.43□□□□□ -0.1
LSM1-203ENST00000520755 TMEM52Q8NDY8 209 aa14.43□□□□□ -0.1
LSM1-203ENST00000520755 UCN3Q969E3 161 aa14.43□□□□□ -0.1
LSM1-203ENST00000520755 TEX37Q96LM6 180 aa14.43□□□□□ -0.1
LSM1-203ENST00000520755 SPSB2Q99619 263 aa14.43□□□□□ -0.1
LSM1-203ENST00000520755 NPLQ9BXD5 320 aaPredicted RBP14.43□□□□□ -0.1
LSM1-203ENST00000520755 NMUR2Q9GZQ4 415 aa14.43□□□□□ -0.1
LSM1-203ENST00000520755 SLC26A1Q9H2B4 701 aa14.43□□□□□ -0.1
LSM1-203ENST00000520755 WDR54Q9H977 334 aa14.43□□□□□ -0.1
LSM1-203ENST00000520755 LYRM4Q9HD34 91 aa14.43□□□□□ -0.1
LSM1-203ENST00000520755 SDR39U1Q9NRG7 319 aaPredicted RBP14.43□□□□□ -0.1
LSM1-203ENST00000520755 LYARQ9NX58 379 aaKnown RBP14.43□□□□□ -0.1
LSM1-203ENST00000520755 HEY2Q9UBP5 337 aa14.43□□□□□ -0.1
LSM1-203ENST00000520755 NXT1Q9UKK6 140 aaKnown RBP14.43□□□□□ -0.1
LSM1-203ENST00000520755 FBXW2Q9UKT8 454 aa14.43□□□□□ -0.1
LSM1-203ENST00000520755 EIF3LQ9Y262 564 aaKnown RBP14.43□□□□□ -0.1
LSM1-203ENST00000520755 SSUH2Q9Y2M2 353 aa14.43□□□□□ -0.1
LSM1-203ENST00000520755 ARL2BPQ9Y2Y0 163 aa14.43□□□□□ -0.1
LSM1-203ENST00000520755 IGLV3-12A0A075B6K2 115 aa14.42□□□□□ -0.1
LSM1-203ENST00000520755 ARHGAP10A1A4S6 786 aa14.42□□□□□ -0.1
LSM1-203ENST00000520755 VSTM2BA6NLU5 285 aa14.42□□□□□ -0.1
LSM1-203ENST00000520755 ZNF891A8MT65 544 aaPredicted RBP14.42□□□□□ -0.1
LSM1-203ENST00000520755 CYR61O00622 381 aa14.42□□□□□ -0.1
LSM1-203ENST00000520755 NKX2-8O15522 239 aa14.42□□□□□ -0.1
LSM1-203ENST00000520755 JRKO75564 520 aa14.42□□□□□ -0.1
LSM1-203ENST00000520755 MYO1DO94832 1006 aa14.42□□□□□ -0.1
LSM1-203ENST00000520755 PRKAR1AP10644 381 aa14.42□□□□□ -0.1
LSM1-203ENST00000520755 PRPS2P11908 318 aa14.42□□□□□ -0.1
LSM1-203ENST00000520755 IDO1P14902 403 aa14.42□□□□□ -0.1
LSM1-203ENST00000520755 MAPK1P28482 360 aa14.42□□□□□ -0.1
LSM1-203ENST00000520755 EFNA3P52797 238 aa14.42□□□□□ -0.1
LSM1-203ENST00000520755 UCNP55089 124 aa14.42□□□□□ -0.1
LSM1-203ENST00000520755 NME5P56597 212 aa14.42□□□□□ -0.1
LSM1-203ENST00000520755 TMPRSS3P57727 454 aa14.42□□□□□ -0.1
LSM1-203ENST00000520755 RAB38P57729 211 aa14.42□□□□□ -0.1
LSM1-203ENST00000520755 TAS2R50P59544 299 aa14.42□□□□□ -0.1
LSM1-203ENST00000520755 TRA2BP62995 288 aaKnown RBP14.42□□□□□ -0.1
LSM1-203ENST00000520755 MC1RQ01726 317 aa14.42□□□□□ -0.1
LSM1-203ENST00000520755 TNFRSF17Q02223 184 aa14.42□□□□□ -0.1
LSM1-203ENST00000520755 KLC1Q07866 573 aa14.42□□□□□ -0.1
LSM1-203ENST00000520755 IL10RAQ13651 578 aa14.42□□□□□ -0.1
LSM1-203ENST00000520755 UBAP2LQ14157 1087 aaKnown RBP14.42□□□□□ -0.1
LSM1-203ENST00000520755 ERV3-1Q14264 604 aa14.42□□□□□ -0.1
LSM1-203ENST00000520755 PRSS53Q2L4Q9 553 aa14.42□□□□□ -0.1
LSM1-203ENST00000520755 PDCD4Q53EL6 469 aaKnown RBP14.42□□□□□ -0.1
LSM1-203ENST00000520755 C18orf63Q68DL7 685 aa14.42□□□□□ -0.1
LSM1-203ENST00000520755 KRTCAP2Q8N6L1 136 aa14.42□□□□□ -0.1
LSM1-203ENST00000520755 EFCAB3Q8N7B9 438 aa14.42□□□□□ -0.1
LSM1-203ENST00000520755 FAM47BQ8NA70 645 aa14.42□□□□□ -0.1
LSM1-203ENST00000520755 ZSCAN1Q8NBB4 408 aa14.42□□□□□ -0.1
LSM1-203ENST00000520755 OR9I1Q8NGQ6 314 aa14.42□□□□□ -0.1
LSM1-203ENST00000520755 OR2Y1Q8NGV0 311 aa14.42□□□□□ -0.1
LSM1-203ENST00000520755 CDC26Q8NHZ8 85 aa14.42□□□□□ -0.1
LSM1-203ENST00000520755 FAM117AQ9C073 453 aa14.42□□□□□ -0.1
LSM1-203ENST00000520755 MYLK2Q9H1R3 596 aa14.42□□□□□ -0.1
LSM1-203ENST00000520755 SAR1AQ9NR31 198 aa14.42□□□□□ -0.1
LSM1-203ENST00000520755 C14orf105Q9NVL8 296 aa14.42□□□□□ -0.1
LSM1-203ENST00000520755 MAP1BP46821 2468 aaKnown RBP14.42□□□□□ -0.1
LSM1-203ENST00000520755 ACACBO00763 2458 aa14.41□□□□□ -0.1
LSM1-203ENST00000520755 CDC14CA4D256 554 aa14.41□□□□□ -0.1
LSM1-203ENST00000520755 C9JVG2 144 aa14.41□□□□□ -0.1
LSM1-203ENST00000520755 FAM227AF5H4B4 570 aa14.41□□□□□ -0.1
LSM1-203ENST00000520755 PSMD12O00232 456 aaPredicted RBP14.41□□□□□ -0.1
LSM1-203ENST00000520755 FCHO1O14526 889 aa14.41□□□□□ -0.1
LSM1-203ENST00000520755 PROM1O43490 865 aa14.41□□□□□ -0.1
LSM1-203ENST00000520755 CDC123O75794 336 aaPredicted RBP14.41□□□□□ -0.1
LSM1-203ENST00000520755 LRATO95237 230 aa14.41□□□□□ -0.1
LSM1-203ENST00000520755 BMP10O95393 424 aa14.41□□□□□ -0.1
LSM1-203ENST00000520755 RNH1P13489 461 aaKnown RBP14.41□□□□□ -0.1
LSM1-203ENST00000520755 GPX3P22352 226 aa14.41□□□□□ -0.1
LSM1-203ENST00000520755 IL12AP29459 219 aa14.41□□□□□ -0.1
LSM1-203ENST00000520755 OTX2P32243 289 aa14.41□□□□□ -0.1
LSM1-203ENST00000520755 ATP4BP51164 291 aa14.41□□□□□ -0.1
LSM1-203ENST00000520755 C21orf58P58505 322 aa14.41□□□□□ -0.1
LSM1-203ENST00000520755 UFM1P61960 85 aa14.41□□□□□ -0.1
LSM1-203ENST00000520755 CXADRP78310 365 aa14.41□□□□□ -0.1
LSM1-203ENST00000520755 SQLEQ14534 574 aa14.41□□□□□ -0.1
LSM1-203ENST00000520755 GSTA3Q16772 222 aa14.41□□□□□ -0.1
LSM1-203ENST00000520755 MINDY4Q4G0A6 757 aa14.41□□□□□ -0.1
LSM1-203ENST00000520755 ATP1A1-AS1Q5TC04 95 aa14.41□□□□□ -0.1
LSM1-203ENST00000520755 NDUFAF5Q5TEU4 345 aa14.41□□□□□ -0.1
LSM1-203ENST00000520755 METTL21CQ5VZV1 264 aa14.41□□□□□ -0.1
LSM1-203ENST00000520755 GPR180Q86V85 440 aa14.41□□□□□ -0.1
LSM1-203ENST00000520755 LAPTM4BQ86VI4 370 aa14.41□□□□□ -0.1
LSM1-203ENST00000520755 RIMKLAQ8IXN7 391 aa14.41□□□□□ -0.1
LSM1-203ENST00000520755 ANKS4BQ8N8V4 417 aa14.41□□□□□ -0.1
LSM1-203ENST00000520755 GFM2Q969S9 779 aaKnown RBP14.41□□□□□ -0.1
LSM1-203ENST00000520755 TBC1D20Q96BZ9 403 aa14.41□□□□□ -0.1
LSM1-203ENST00000520755 CRB3Q9BUF7 120 aa14.41□□□□□ -0.1
LSM1-203ENST00000520755 TGIF2Q9GZN2 237 aa14.41□□□□□ -0.1
LSM1-203ENST00000520755 CLK4Q9HAZ1 481 aaKnown RBP14.41□□□□□ -0.1
LSM1-203ENST00000520755 PHF11Q9UIL8 331 aa14.41□□□□□ -0.1
LSM1-203ENST00000520755 PCSK5Q92824 1860 aa14.41□□□□□ -0.1
LSM1-203ENST00000520755 CFAP47Q6ZTR5 3102 aa14.4□□□□□ -0.1
LSM1-203ENST00000520755 WASHC1A8K0Z3 465 aa14.4□□□□□ -0.1
LSM1-203ENST00000520755 SCAMP2O15127 329 aaKnown RBP14.4□□□□□ -0.1
LSM1-203ENST00000520755 AKAP10O43572 662 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms