RNA–Protein interactions for RNA: ENST00000519664.1

SYNPO-204, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNPO, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-204ENST00000519664 METTL27Q8N6F8 245 aaPredicted RBP11.21□□□□□ -0.62
SYNPO-204ENST00000519664 MYEOVQ96EZ4 313 aa11.21□□□□□ -0.62
SYNPO-204ENST00000519664 MCHR1Q99705 422 aa11.21□□□□□ -0.62
SYNPO-204ENST00000519664 MAPKAP1Q9BPZ7 522 aa11.21□□□□□ -0.62
SYNPO-204ENST00000519664 ZNF224Q9NZL3 707 aa11.21□□□□□ -0.62
SYNPO-204ENST00000519664 MKLN1Q9UL63 735 aa11.21□□□□□ -0.62
SYNPO-204ENST00000519664 MAN2B2Q9Y2E5 1009 aa11.21□□□□□ -0.62
SYNPO-204ENST00000519664 MCM3APO60318 1980 aa11.21□□□□□ -0.62
SYNPO-204ENST00000519664 J3QLW9 94 aa11.21□□□□□ -0.62
SYNPO-204ENST00000519664 YES1P07947 543 aa11.21□□□□□ -0.62
SYNPO-204ENST00000519664 MTHFD2P13995 350 aa11.21□□□□□ -0.62
SYNPO-204ENST00000519664 ZNF19P17023 458 aa11.21□□□□□ -0.62
SYNPO-204ENST00000519664 ABATP80404 500 aa11.21□□□□□ -0.62
SYNPO-204ENST00000519664 SLAMF1Q13291 335 aa11.21□□□□□ -0.62
SYNPO-204ENST00000519664 SPATS1Q496A3 300 aa11.21□□□□□ -0.62
SYNPO-204ENST00000519664 GALNT12Q8IXK2 581 aa11.21□□□□□ -0.62
SYNPO-204ENST00000519664 REM2Q8IYK8 340 aaPredicted RBP11.21□□□□□ -0.62
SYNPO-204ENST00000519664 MEIOBQ8N635 442 aa11.21□□□□□ -0.62
SYNPO-204ENST00000519664 TMEM102Q8N9M5 508 aaPredicted RBP11.21□□□□□ -0.62
SYNPO-204ENST00000519664 RDH12Q96NR8 316 aa11.21□□□□□ -0.62
SYNPO-204ENST00000519664 GPR52Q9Y2T5 361 aa11.21□□□□□ -0.62
SYNPO-204ENST00000519664 A0A1W2PRG6 482 aa11.2□□□□□ -0.62
SYNPO-204ENST00000519664 FRS3O43559 492 aa11.2□□□□□ -0.62
SYNPO-204ENST00000519664 MRPL3P09001 348 aaKnown RBP11.2□□□□□ -0.62
SYNPO-204ENST00000519664 ACADLP28330 430 aa11.2□□□□□ -0.62
SYNPO-204ENST00000519664 PIN1Q13526 163 aaPredicted RBP11.2□□□□□ -0.62
SYNPO-204ENST00000519664 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.2□□□□□ -0.62
SYNPO-204ENST00000519664 JAZF1Q86VZ6 243 aa11.2□□□□□ -0.62
SYNPO-204ENST00000519664 TCEAL8Q8IYN2 117 aa11.2□□□□□ -0.62
SYNPO-204ENST00000519664 LILRA3Q8N6C8 439 aaPredicted RBP11.2□□□□□ -0.62
SYNPO-204ENST00000519664 IQCF1Q8N6M8 205 aa11.2□□□□□ -0.62
SYNPO-204ENST00000519664 C9orf43Q8TAL5 461 aaPredicted RBP11.2□□□□□ -0.62
SYNPO-204ENST00000519664 SLC25A36Q96CQ1 311 aa11.2□□□□□ -0.62
SYNPO-204ENST00000519664 ERVK13-1Q9NX77 482 aa11.2□□□□□ -0.62
SYNPO-204ENST00000519664 IRGMA1A4Y4 181 aa11.2□□□□□ -0.62
SYNPO-204ENST00000519664 OR52A4PA6NMU1 304 aa11.2□□□□□ -0.62
SYNPO-204ENST00000519664 ANHXE9PGG2 379 aa11.2□□□□□ -0.62
SYNPO-204ENST00000519664 H0YJX3 145 aa11.2□□□□□ -0.62
SYNPO-204ENST00000519664 BCAS1O75363 584 aaPredicted RBP11.2□□□□□ -0.62
SYNPO-204ENST00000519664 REM1O75628 298 aa11.2□□□□□ -0.62
SYNPO-204ENST00000519664 ATE1O95260 518 aa11.2□□□□□ -0.62
SYNPO-204ENST00000519664 PIK3CBP42338 1070 aa11.2□□□□□ -0.62
SYNPO-204ENST00000519664 TXNL4AP83876 142 aaKnown RBP11.2□□□□□ -0.62
SYNPO-204ENST00000519664 CDK5R2Q13319 367 aa11.2□□□□□ -0.62
SYNPO-204ENST00000519664 SLC39A5Q6ZMH5 540 aa11.2□□□□□ -0.62
SYNPO-204ENST00000519664 Q6ZNX1 250 aa11.2□□□□□ -0.62
SYNPO-204ENST00000519664 ABHD11Q8NFV4 315 aa11.2□□□□□ -0.62
SYNPO-204ENST00000519664 OR2B2Q9GZK3 357 aa11.2□□□□□ -0.62
SYNPO-204ENST00000519664 IL1RAPQ9NPH3 570 aa11.2□□□□□ -0.62
SYNPO-204ENST00000519664 UCKL1Q9NWZ5 548 aa11.2□□□□□ -0.62
SYNPO-204ENST00000519664 DNAJC13O75165 2243 aa11.2□□□□□ -0.62
SYNPO-204ENST00000519664 HEPACAM2A8MVW5 462 aa11.2□□□□□ -0.62
SYNPO-204ENST00000519664 FAM25EA8MYX2 175 aa11.2□□□□□ -0.62
SYNPO-204ENST00000519664 XKRYO14609 159 aa11.2□□□□□ -0.62
SYNPO-204ENST00000519664 C21orf33P30042 268 aaPredicted RBP11.2□□□□□ -0.62
SYNPO-204ENST00000519664 CNR2P34972 360 aa11.2□□□□□ -0.62
SYNPO-204ENST00000519664 TMEM107Q6UX40 140 aa11.2□□□□□ -0.62
SYNPO-204ENST00000519664 OAFQ86UD1 273 aa11.2□□□□□ -0.62
SYNPO-204ENST00000519664 NCSTNQ92542 709 aa11.2□□□□□ -0.62
SYNPO-204ENST00000519664 PIK3R3Q92569 461 aa11.2□□□□□ -0.62
SYNPO-204ENST00000519664 NKD1Q969G9 470 aa11.2□□□□□ -0.62
SYNPO-204ENST00000519664 TMCO6Q96DC7 493 aa11.2□□□□□ -0.62
SYNPO-204ENST00000519664 TMEM19Q96HH6 336 aa11.2□□□□□ -0.62
SYNPO-204ENST00000519664 WACQ9BTA9 647 aa11.2□□□□□ -0.62
SYNPO-204ENST00000519664 RC3H2Q9HBD1 1191 aaKnown RBP11.2□□□□□ -0.62
SYNPO-204ENST00000519664 CCL26Q9Y258 94 aa11.2□□□□□ -0.62
SYNPO-204ENST00000519664 ASB1Q9Y576 335 aa11.2□□□□□ -0.62
SYNPO-204ENST00000519664 GABRR3A8MPY1 467 aa11.19□□□□□ -0.62
SYNPO-204ENST00000519664 SCAMP2O15127 329 aaKnown RBP11.19□□□□□ -0.62
SYNPO-204ENST00000519664 PRMT3O60678 531 aa11.19□□□□□ -0.62
SYNPO-204ENST00000519664 GNRH1P01148 92 aa11.19□□□□□ -0.62
SYNPO-204ENST00000519664 MPC1LP0DKB6 136 aa11.19□□□□□ -0.62
SYNPO-204ENST00000519664 SLC2A2P11168 524 aaPredicted RBP11.19□□□□□ -0.62
SYNPO-204ENST00000519664 IFI30P13284 250 aa11.19□□□□□ -0.62
SYNPO-204ENST00000519664 MNDAP41218 407 aa11.19□□□□□ -0.62
SYNPO-204ENST00000519664 STAT5AP42229 794 aa11.19□□□□□ -0.62
SYNPO-204ENST00000519664 ST3GAL3Q11203 375 aa11.19□□□□□ -0.62
SYNPO-204ENST00000519664 NHSL2Q5HYW2 709 aa11.19□□□□□ -0.62
SYNPO-204ENST00000519664 NXPE4Q6UWF7 544 aa11.19□□□□□ -0.62
SYNPO-204ENST00000519664 GATSQ8NAP1 163 aa11.19□□□□□ -0.62
SYNPO-204ENST00000519664 TTLQ8NG68 377 aa11.19□□□□□ -0.62
SYNPO-204ENST00000519664 OR8H1Q8NGG4 311 aa11.19□□□□□ -0.62
SYNPO-204ENST00000519664 CAMK1GQ96NX5 476 aa11.19□□□□□ -0.62
SYNPO-204ENST00000519664 NPLQ9BXD5 320 aaPredicted RBP11.19□□□□□ -0.62
SYNPO-204ENST00000519664 CHIAQ9BZP6 476 aa11.19□□□□□ -0.62
SYNPO-204ENST00000519664 LHX3Q9UBR4 397 aa11.19□□□□□ -0.62
SYNPO-204ENST00000519664 ABCG2Q9UNQ0 655 aa11.19□□□□□ -0.62
SYNPO-204ENST00000519664 USP54Q70EL1 1684 aa11.19□□□□□ -0.62
SYNPO-204ENST00000519664 A0A1B0GTL3 188 aa11.19□□□□□ -0.62
SYNPO-204ENST00000519664 A0A1W2PQU0 124 aa11.19□□□□□ -0.62
SYNPO-204ENST00000519664 TMEM189-UBE2V1I3L0A0 370 aa11.19□□□□□ -0.62
SYNPO-204ENST00000519664 KLHL18O94889 574 aa11.19□□□□□ -0.62
SYNPO-204ENST00000519664 ZNF761Q86XN6 746 aaPredicted RBP11.19□□□□□ -0.62
SYNPO-204ENST00000519664 BADQ92934 168 aa11.19□□□□□ -0.62
SYNPO-204ENST00000519664 ZNF689Q96CS4 500 aaPredicted RBP11.19□□□□□ -0.62
SYNPO-204ENST00000519664 PIP5K1AQ99755 562 aa11.19□□□□□ -0.62
SYNPO-204ENST00000519664 ZNF717Q9BY31 904 aaPredicted RBP11.19□□□□□ -0.62
SYNPO-204ENST00000519664 KATNBL1Q9H079 304 aa11.19□□□□□ -0.62
SYNPO-204ENST00000519664 ANKHQ9HCJ1 492 aa11.19□□□□□ -0.62
SYNPO-204ENST00000519664 DCAF13Q9NV06 445 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms