RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 CHSY3Q70JA7 882 aa11.54□□□□□ -0.56
CSMD1-205ENST00000519623 RNF175Q8N4F7 328 aa11.54□□□□□ -0.56
CSMD1-205ENST00000519623 MARVELD2Q8N4S9 558 aa11.54□□□□□ -0.56
CSMD1-205ENST00000519623 OR14A16Q8NHC5 309 aa11.54□□□□□ -0.56
CSMD1-205ENST00000519623 UBTD2Q8WUN7 234 aa11.54□□□□□ -0.56
CSMD1-205ENST00000519623 SREK1Q8WXA9 508 aaKnown RBP11.54□□□□□ -0.56
CSMD1-205ENST00000519623 ASB15Q8WXK1 588 aa11.54□□□□□ -0.56
CSMD1-205ENST00000519623 UBE2E3Q969T4 207 aa11.54□□□□□ -0.56
CSMD1-205ENST00000519623 NXNL1Q96CM4 212 aa11.54□□□□□ -0.56
CSMD1-205ENST00000519623 OR8D2Q9GZM6 311 aa11.54□□□□□ -0.56
CSMD1-205ENST00000519623 DEFB127Q9H1M4 99 aa11.54□□□□□ -0.56
CSMD1-205ENST00000519623 HPF1Q9NWY4 346 aa11.54□□□□□ -0.56
CSMD1-205ENST00000519623 UTP11Q9Y3A2 253 aaKnown RBP11.54□□□□□ -0.56
CSMD1-205ENST00000519623 ADGRG4Q8IZF6 3080 aa11.54□□□□□ -0.56
CSMD1-205ENST00000519623 CSMD2Q7Z408 3487 aa11.54□□□□□ -0.56
CSMD1-205ENST00000519623 CCDC168Q8NDH2 2452 aa11.53□□□□□ -0.56
CSMD1-205ENST00000519623 A0A0G2JMM0 328 aa11.53□□□□□ -0.56
CSMD1-205ENST00000519623 A0A1W2PPB8 328 aa11.53□□□□□ -0.56
CSMD1-205ENST00000519623 A0A1W2PRS3 328 aa11.53□□□□□ -0.56
CSMD1-205ENST00000519623 HMX2A2RU54 273 aa11.53□□□□□ -0.56
CSMD1-205ENST00000519623 KIR3DP1A8MWS1 328 aa11.53□□□□□ -0.56
CSMD1-205ENST00000519623 SAP18O00422 153 aaKnown RBP11.53□□□□□ -0.56
CSMD1-205ENST00000519623 CDC40O60508 579 aaKnown RBP eCLIP11.53□□□□□ -0.56
CSMD1-205ENST00000519623 TPOP07202 933 aa11.53□□□□□ -0.56
CSMD1-205ENST00000519623 PCNAP12004 261 aa11.53□□□□□ -0.56
CSMD1-205ENST00000519623 TNNI3P19429 210 aa11.53□□□□□ -0.56
CSMD1-205ENST00000519623 IGLV3-21P80748 117 aaPredicted RBP11.53□□□□□ -0.56
CSMD1-205ENST00000519623 KHDRBS2Q5VWX1 349 aaKnown RBP11.53□□□□□ -0.56
CSMD1-205ENST00000519623 OR4C11Q6IEV9 310 aa11.53□□□□□ -0.56
CSMD1-205ENST00000519623 TBC1D1Q86TI0 1168 aaPredicted RBP11.53□□□□□ -0.56
CSMD1-205ENST00000519623 CD163Q86VB7 1156 aa11.53□□□□□ -0.56
CSMD1-205ENST00000519623 CCDC25Q86WR0 208 aa11.53□□□□□ -0.56
CSMD1-205ENST00000519623 OR4N5Q8IXE1 308 aa11.53□□□□□ -0.56
CSMD1-205ENST00000519623 CENPLQ8N0S6 344 aaPredicted RBP11.53□□□□□ -0.56
CSMD1-205ENST00000519623 EID3Q8N140 333 aa11.53□□□□□ -0.56
CSMD1-205ENST00000519623 OR2M7Q8NG81 312 aa11.53□□□□□ -0.56
CSMD1-205ENST00000519623 SLC2A12Q8TD20 617 aa11.53□□□□□ -0.56
CSMD1-205ENST00000519623 ZNF721Q8TF20 911 aa11.53□□□□□ -0.56
CSMD1-205ENST00000519623 SDCCAG3Q96C92 435 aa11.53□□□□□ -0.56
CSMD1-205ENST00000519623 CMTM7Q96FZ5 175 aa11.53□□□□□ -0.56
CSMD1-205ENST00000519623 SCYL1Q96KG9 808 aa11.53□□□□□ -0.56
CSMD1-205ENST00000519623 LURAP1Q96LR2 239 aa11.53□□□□□ -0.56
CSMD1-205ENST00000519623 SPOCK3Q9BQ16 436 aa11.53□□□□□ -0.56
CSMD1-205ENST00000519623 SORBS1Q9BX66 1292 aaKnown RBP11.53□□□□□ -0.56
CSMD1-205ENST00000519623 ENKD1Q9H0I2 346 aa11.53□□□□□ -0.56
CSMD1-205ENST00000519623 OR51B5Q9H339 312 aa11.53□□□□□ -0.56
CSMD1-205ENST00000519623 ZDHHC11Q9H8X9 412 aa11.53□□□□□ -0.56
CSMD1-205ENST00000519623 OPTCQ9UBM4 332 aa11.53□□□□□ -0.56
CSMD1-205ENST00000519623 PPT2Q9UMR5 302 aa11.53□□□□□ -0.56
CSMD1-205ENST00000519623 ACOT9Q9Y305 439 aa11.53□□□□□ -0.56
CSMD1-205ENST00000519623 PHF3Q92576 2039 aaKnown RBP11.52□□□□□ -0.56
CSMD1-205ENST00000519623 SUPT3HB4E1H0 165 aa11.52□□□□□ -0.57
CSMD1-205ENST00000519623 FGF17O60258 216 aa11.52□□□□□ -0.57
CSMD1-205ENST00000519623 SUPT3HO75486 399 aa11.52□□□□□ -0.57
CSMD1-205ENST00000519623 GLSO94925 669 aaPredicted RBP11.52□□□□□ -0.57
CSMD1-205ENST00000519623 EPB42P16452 691 aa11.52□□□□□ -0.57
CSMD1-205ENST00000519623 POU3F2P20265 443 aaPredicted RBP11.52□□□□□ -0.57
CSMD1-205ENST00000519623 CNR1P21554 472 aa11.52□□□□□ -0.57
CSMD1-205ENST00000519623 CPN2P22792 545 aa11.52□□□□□ -0.57
CSMD1-205ENST00000519623 SERPINB1P30740 379 aa11.52□□□□□ -0.57
CSMD1-205ENST00000519623 CASQ1P31415 396 aa11.52□□□□□ -0.57
CSMD1-205ENST00000519623 STX2P32856 288 aa11.52□□□□□ -0.57
CSMD1-205ENST00000519623 PIK3CBP42338 1070 aa11.52□□□□□ -0.57
CSMD1-205ENST00000519623 ETF1P62495 437 aaKnown RBP11.52□□□□□ -0.57
CSMD1-205ENST00000519623 PPIAP62937 165 aaKnown RBP11.52□□□□□ -0.57
CSMD1-205ENST00000519623 SLAMF1Q13291 335 aa11.52□□□□□ -0.57
CSMD1-205ENST00000519623 NAB1Q13506 487 aa11.52□□□□□ -0.57
CSMD1-205ENST00000519623 SLMAPQ14BN4 828 aa11.52□□□□□ -0.57
CSMD1-205ENST00000519623 PIGGQ5H8A4 983 aa11.52□□□□□ -0.57
CSMD1-205ENST00000519623 GRHL2Q6ISB3 625 aa11.52□□□□□ -0.57
CSMD1-205ENST00000519623 ARHGAP11AQ6P4F7 1023 aa11.52□□□□□ -0.57
CSMD1-205ENST00000519623 DGAT2L6Q6ZPD8 337 aa11.52□□□□□ -0.57
CSMD1-205ENST00000519623 ZNF572Q7Z3I7 529 aaPredicted RBP11.52□□□□□ -0.57
CSMD1-205ENST00000519623 C17orf53Q8N3J3 647 aaPredicted RBP11.52□□□□□ -0.57
CSMD1-205ENST00000519623 TEX9Q8N6V9 391 aa11.52□□□□□ -0.57
CSMD1-205ENST00000519623 OR5L2Q8NGL0 311 aa11.52□□□□□ -0.57
CSMD1-205ENST00000519623 HUS1BQ8NHY5 278 aa11.52□□□□□ -0.57
CSMD1-205ENST00000519623 RHEBL1Q8TAI7 183 aa11.52□□□□□ -0.57
CSMD1-205ENST00000519623 KCTD4Q8WVF5 259 aa11.52□□□□□ -0.57
CSMD1-205ENST00000519623 SENP5Q96HI0 755 aaPredicted RBP11.52□□□□□ -0.57
CSMD1-205ENST00000519623 SGCZQ96LD1 299 aa11.52□□□□□ -0.57
CSMD1-205ENST00000519623 GPR78Q96P69 363 aa11.52□□□□□ -0.57
CSMD1-205ENST00000519623 TREX2Q9BQ50 279 aaPredicted RBP11.52□□□□□ -0.57
CSMD1-205ENST00000519623 RAB17Q9H0T7 212 aa11.52□□□□□ -0.57
CSMD1-205ENST00000519623 ADGRE2Q9UHX3 823 aa11.52□□□□□ -0.57
CSMD1-205ENST00000519623 TSC22D4Q9Y3Q8 395 aa11.52□□□□□ -0.57
CSMD1-205ENST00000519623 INTS1Q8N201 2190 aaKnown RBP11.52□□□□□ -0.57
CSMD1-205ENST00000519623 HCFC1P51610 2035 aa11.52□□□□□ -0.57
CSMD1-205ENST00000519623 CCDC189A1A4V9 331 aa11.51□□□□□ -0.57
CSMD1-205ENST00000519623 LRRC14BA6NHZ5 514 aa11.51□□□□□ -0.57
CSMD1-205ENST00000519623 WASHC1A8K0Z3 465 aa11.51□□□□□ -0.57
CSMD1-205ENST00000519623 FAM166BA8MTA8 275 aa11.51□□□□□ -0.57
CSMD1-205ENST00000519623 G3V3Y1 287 aa11.51□□□□□ -0.57
CSMD1-205ENST00000519623 PLPP1O14494 284 aa11.51□□□□□ -0.57
CSMD1-205ENST00000519623 KLK8O60259 260 aa11.51□□□□□ -0.57
CSMD1-205ENST00000519623 IGKV3-11P04433 115 aa11.51□□□□□ -0.57
CSMD1-205ENST00000519623 C2P06681 752 aa11.51□□□□□ -0.57
CSMD1-205ENST00000519623 SSR2P43308 183 aa11.51□□□□□ -0.57
CSMD1-205ENST00000519623 STT3AP46977 705 aa11.51□□□□□ -0.57
CSMD1-205ENST00000519623 KRTAP10-9P60411 292 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms