RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 MUC21Q5SSG8 566 aa4.82□□□□□ -1.64
PTPN12-213ENST00000519553 SNRNP48Q6IEG0 339 aaKnown RBP4.82□□□□□ -1.64
PTPN12-213ENST00000519553 IYDQ6PHW0 289 aa4.82□□□□□ -1.64
PTPN12-213ENST00000519553 TMEM270Q6UE05 265 aa4.82□□□□□ -1.64
PTPN12-213ENST00000519553 ZNF730Q6ZMV8 503 aa4.82□□□□□ -1.64
PTPN12-213ENST00000519553 ERC1Q8IUD2 1116 aa4.82□□□□□ -1.64
PTPN12-213ENST00000519553 WDR49Q8IV35 697 aa4.82□□□□□ -1.64
PTPN12-213ENST00000519553 CCDC197Q8NCU1 140 aa4.82□□□□□ -1.64
PTPN12-213ENST00000519553 GANCQ8TET4 914 aa4.82□□□□□ -1.64
PTPN12-213ENST00000519553 VMP1Q96GC9 406 aa4.82□□□□□ -1.64
PTPN12-213ENST00000519553 S1PR3Q99500 378 aa4.82□□□□□ -1.64
PTPN12-213ENST00000519553 DCTN5Q9BTE1 182 aa4.82□□□□□ -1.64
PTPN12-213ENST00000519553 OSBPL8Q9BZF1 889 aa4.82□□□□□ -1.64
PTPN12-213ENST00000519553 SPATA2Q9UM82 520 aa4.82□□□□□ -1.64
PTPN12-213ENST00000519553 LRRD1A4D1F6 860 aa4.81□□□□□ -1.64
PTPN12-213ENST00000519553 OGTO15294 1046 aa4.81□□□□□ -1.64
PTPN12-213ENST00000519553 TXNL1O43396 289 aa4.81□□□□□ -1.64
PTPN12-213ENST00000519553 GALR3O60755 368 aaPredicted RBP4.81□□□□□ -1.64
PTPN12-213ENST00000519553 FRAT2O75474 233 aaPredicted RBP4.81□□□□□ -1.64
PTPN12-213ENST00000519553 AKAP3O75969 853 aa4.81□□□□□ -1.64
PTPN12-213ENST00000519553 SEMA4FO95754 770 aa4.81□□□□□ -1.64
PTPN12-213ENST00000519553 HCKP08631 526 aa4.81□□□□□ -1.64
PTPN12-213ENST00000519553 RIDAP52758 137 aaKnown RBP4.81□□□□□ -1.64
PTPN12-213ENST00000519553 ACY1Q03154 408 aa4.81□□□□□ -1.64
PTPN12-213ENST00000519553 ZNF239Q16600 458 aaKnown RBP4.81□□□□□ -1.64
PTPN12-213ENST00000519553 CCL14Q16627 93 aa4.81□□□□□ -1.64
PTPN12-213ENST00000519553 SMU1Q2TAY7 513 aa4.81□□□□□ -1.64
PTPN12-213ENST00000519553 AARDQ4LEZ3 155 aa4.81□□□□□ -1.64
PTPN12-213ENST00000519553 ALKBH5Q6P6C2 394 aaKnown RBP4.81□□□□□ -1.64
PTPN12-213ENST00000519553 NUFIP2Q7Z417 695 aaKnown RBP4.81□□□□□ -1.64
PTPN12-213ENST00000519553 TMCO5AQ8N6Q1 288 aa4.81□□□□□ -1.64
PTPN12-213ENST00000519553 BANPQ8N9N5 519 aa4.81□□□□□ -1.64
PTPN12-213ENST00000519553 CLEC1AQ8NC01 280 aa4.81□□□□□ -1.64
PTPN12-213ENST00000519553 CSNK1G2-AS1Q8NCQ2 148 aa4.81□□□□□ -1.64
PTPN12-213ENST00000519553 ZNRF1Q8ND25 227 aa4.81□□□□□ -1.64
PTPN12-213ENST00000519553 OR1B1Q8NGR6 318 aa4.81□□□□□ -1.64
PTPN12-213ENST00000519553 OR4Q3Q8NH05 313 aa4.81□□□□□ -1.64
PTPN12-213ENST00000519553 RNASE8Q8TDE3 154 aaKnown RBP4.81□□□□□ -1.64
PTPN12-213ENST00000519553 PRCCQ92733 491 aaPredicted RBP4.81□□□□□ -1.64
PTPN12-213ENST00000519553 TOMM40LQ969M1 308 aa4.81□□□□□ -1.64
PTPN12-213ENST00000519553 PCED1BQ96HM7 432 aa4.81□□□□□ -1.64
PTPN12-213ENST00000519553 C1orf147Q96MC9 270 aaPredicted RBP4.81□□□□□ -1.64
PTPN12-213ENST00000519553 GUCD1Q96NT3 240 aa4.81□□□□□ -1.64
PTPN12-213ENST00000519553 RAB40CQ96S21 281 aa4.81□□□□□ -1.64
PTPN12-213ENST00000519553 DDX50Q9BQ39 737 aaKnown RBP4.81□□□□□ -1.64
PTPN12-213ENST00000519553 NTMT1Q9BV86 223 aa4.81□□□□□ -1.64
PTPN12-213ENST00000519553 NAPBQ9H115 298 aa4.81□□□□□ -1.64
PTPN12-213ENST00000519553 ALDH8A1Q9H2A2 487 aaPredicted RBP4.81□□□□□ -1.64
PTPN12-213ENST00000519553 NOL7Q9UMY1 257 aaKnown RBP4.81□□□□□ -1.64
PTPN12-213ENST00000519553 ERVK-19Q9WJR5 959 aa4.81□□□□□ -1.64
PTPN12-213ENST00000519553 AUP1Q9Y679 476 aa4.81□□□□□ -1.64
PTPN12-213ENST00000519553 SLC15A5A6NIM6 579 aa4.8□□□□□ -1.64
PTPN12-213ENST00000519553 RPL37AP8A6NKH3 93 aa4.8□□□□□ -1.64
PTPN12-213ENST00000519553 RENP00797 406 aa4.8□□□□□ -1.64
PTPN12-213ENST00000519553 EPOP01588 193 aa4.8□□□□□ -1.64
PTPN12-213ENST00000519553 EZRP15311 586 aaKnown RBP4.8□□□□□ -1.64
PTPN12-213ENST00000519553 GPX3P22352 226 aa4.8□□□□□ -1.64
PTPN12-213ENST00000519553 LIMK2P53671 638 aa4.8□□□□□ -1.64
PTPN12-213ENST00000519553 MSLNQ13421 630 aaPredicted RBP4.8□□□□□ -1.64
PTPN12-213ENST00000519553 FASTKQ14296 549 aaKnown RBP4.8□□□□□ -1.64
PTPN12-213ENST00000519553 RPS6KA1Q15418 735 aa4.8□□□□□ -1.64
PTPN12-213ENST00000519553 ZNF774Q6NX45 483 aa4.8□□□□□ -1.64
PTPN12-213ENST00000519553 PRSS42Q7Z5A4 293 aa4.8□□□□□ -1.64
PTPN12-213ENST00000519553 P2RY8Q86VZ1 359 aa4.8□□□□□ -1.64
PTPN12-213ENST00000519553 C17orf64Q86WR6 236 aa4.8□□□□□ -1.64
PTPN12-213ENST00000519553 IQCA1Q86XH1 822 aa4.8□□□□□ -1.64
PTPN12-213ENST00000519553 PCNPQ8WW12 178 aaKnown RBP4.8□□□□□ -1.64
PTPN12-213ENST00000519553 HAS2Q92819 552 aa4.8□□□□□ -1.64
PTPN12-213ENST00000519553 AGPAT1Q99943 283 aa4.8□□□□□ -1.64
PTPN12-213ENST00000519553 CXXC4Q9H2H0 198 aa4.8□□□□□ -1.64
PTPN12-213ENST00000519553 LIME1Q9H400 295 aa4.8□□□□□ -1.64
PTPN12-213ENST00000519553 MAGEF1Q9HAY2 307 aa4.8□□□□□ -1.64
PTPN12-213ENST00000519553 KCNK6Q9Y257 313 aa4.8□□□□□ -1.64
PTPN12-213ENST00000519553 SMAD5-AS1Q9Y6J3 95 aa4.8□□□□□ -1.64
PTPN12-213ENST00000519553 A0A1B0GVY2 172 aa4.79□□□□□ -1.64
PTPN12-213ENST00000519553 C5orf51A6NDU8 294 aa4.79□□□□□ -1.64
PTPN12-213ENST00000519553 CSO75390 466 aaKnown RBP4.79□□□□□ -1.64
PTPN12-213ENST00000519553 SRSF10O75494 262 aaKnown RBP4.79□□□□□ -1.64
PTPN12-213ENST00000519553 CPNE6O95741 557 aa4.79□□□□□ -1.64
PTPN12-213ENST00000519553 CHRNGP07510 517 aa4.79□□□□□ -1.64
PTPN12-213ENST00000519553 B4GALT1P15291 398 aa4.79□□□□□ -1.64
PTPN12-213ENST00000519553 SLC1A4P43007 532 aa4.79□□□□□ -1.64
PTPN12-213ENST00000519553 PTGER3P43115 390 aa4.79□□□□□ -1.64
PTPN12-213ENST00000519553 SLC1A6P48664 564 aa4.79□□□□□ -1.64
PTPN12-213ENST00000519553 NME5P56597 212 aa4.79□□□□□ -1.64
PTPN12-213ENST00000519553 RPL27P61353 136 aaKnown RBP4.79□□□□□ -1.64
PTPN12-213ENST00000519553 LCP2Q13094 533 aa4.79□□□□□ -1.64
PTPN12-213ENST00000519553 OR1C1Q15619 314 aa4.79□□□□□ -1.64
PTPN12-213ENST00000519553 REG3GQ6UW15 175 aa4.79□□□□□ -1.64
PTPN12-213ENST00000519553 CD164L2Q6UWJ8 174 aa4.79□□□□□ -1.64
PTPN12-213ENST00000519553 FGFRL1Q8N441 504 aa4.79□□□□□ -1.64
PTPN12-213ENST00000519553 NAT8LQ8N9F0 302 aa4.79□□□□□ -1.64
PTPN12-213ENST00000519553 RPP25Q9BUL9 199 aaKnown RBP4.79□□□□□ -1.64
PTPN12-213ENST00000519553 LRRCC1Q9C099 1032 aa4.79□□□□□ -1.64
PTPN12-213ENST00000519553 SLC5A7Q9GZV3 580 aa4.79□□□□□ -1.64
PTPN12-213ENST00000519553 WWP1Q9H0M0 922 aa4.79□□□□□ -1.64
PTPN12-213ENST00000519553 TSPYL1Q9H0U9 437 aa4.79□□□□□ -1.64
PTPN12-213ENST00000519553 TECRQ9NZ01 308 aaKnown RBP4.79□□□□□ -1.64
PTPN12-213ENST00000519553 TRPC4Q9UBN4 977 aa4.79□□□□□ -1.64
PTPN12-213ENST00000519553 STX8Q9UNK0 236 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms