RNA–Protein interactions for RNA: ENST00000519362.5

SPIDR-210, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,807 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-210	ENST00000519362	GABARAPL3	Q9BY60	117 aa		11.74	□□□□□ -0.53
SPIDR-210	ENST00000519362	TWSG1	Q9GZX9	223 aa		11.74	□□□□□ -0.53
SPIDR-210	ENST00000519362	C8orf33	Q9H7E9	229 aa	Predicted RBP	11.74	□□□□□ -0.53
SPIDR-210	ENST00000519362	SYNPO2L	Q9H987	977 aa		11.74	□□□□□ -0.53
SPIDR-210	ENST00000519362	LIN28A	Q9H9Z2	209 aa	Known RBP	11.74	□□□□□ -0.53
SPIDR-210	ENST00000519362	EXD2	Q9NVH0	621 aa		11.74	□□□□□ -0.53
SPIDR-210	ENST00000519362	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	11.74	□□□□□ -0.53
SPIDR-210	ENST00000519362	OR6C2	Q9NZP2	312 aa		11.74	□□□□□ -0.53
SPIDR-210	ENST00000519362	KIF17	Q9P2E2	1029 aa		11.74	□□□□□ -0.53
SPIDR-210	ENST00000519362	PNMA8B	Q9ULN7	279 aa	Predicted RBP	11.74	□□□□□ -0.53
SPIDR-210	ENST00000519362	CA5B	Q9Y2D0	317 aa		11.74	□□□□□ -0.53
SPIDR-210	ENST00000519362	TESMIN	Q9Y4I5	508 aa		11.74	□□□□□ -0.53
SPIDR-210	ENST00000519362	ASB4	Q9Y574	426 aa		11.74	□□□□□ -0.53
SPIDR-210	ENST00000519362	PCDHGA4	Q9Y5G9	962 aa		11.74	□□□□□ -0.53
SPIDR-210	ENST00000519362	GMPPB	Q9Y5P6	360 aa		11.74	□□□□□ -0.53
SPIDR-210	ENST00000519362	SNX11	Q9Y5W9	270 aa		11.74	□□□□□ -0.53
SPIDR-210	ENST00000519362	MYO9B	Q13459	2157 aa		11.74	□□□□□ -0.53
SPIDR-210	ENST00000519362	C10orf142	B7Z368	130 aa		11.74	□□□□□ -0.53
SPIDR-210	ENST00000519362	TNFRSF11B	O00300	401 aa		11.74	□□□□□ -0.53
SPIDR-210	ENST00000519362	DNAJB5	O75953	348 aa		11.74	□□□□□ -0.53
SPIDR-210	ENST00000519362	ITGA2	P17301	1181 aa		11.74	□□□□□ -0.53
SPIDR-210	ENST00000519362	HIST1H1T	P22492	207 aa	Predicted RBP	11.74	□□□□□ -0.53
SPIDR-210	ENST00000519362	HNRNPA2B1	P22626	353 aa	Known RBP	11.74	□□□□□ -0.53
SPIDR-210	ENST00000519362	AK4	P27144	223 aa	Predicted RBP	11.74	□□□□□ -0.53
SPIDR-210	ENST00000519362	NDUFS1	P28331	727 aa		11.74	□□□□□ -0.53
SPIDR-210	ENST00000519362	CMPK1	P30085	196 aa		11.74	□□□□□ -0.53
SPIDR-210	ENST00000519362	XCR1	P46094	333 aa		11.74	□□□□□ -0.53
SPIDR-210	ENST00000519362	TPMT	P51580	245 aa		11.74	□□□□□ -0.53
SPIDR-210	ENST00000519362	CXCR4	P61073	352 aa		11.74	□□□□□ -0.53
SPIDR-210	ENST00000519362	RPS26	P62854	115 aa	Known RBP	11.74	□□□□□ -0.53
SPIDR-210	ENST00000519362	IL1RL1	Q01638	556 aa		11.74	□□□□□ -0.53
SPIDR-210	ENST00000519362	SFSWAP	Q12872	951 aa	Known RBP	11.74	□□□□□ -0.53
SPIDR-210	ENST00000519362	NPRL3	Q12980	569 aa		11.74	□□□□□ -0.53
SPIDR-210	ENST00000519362	TUBA3C	Q13748	450 aa		11.74	□□□□□ -0.53
SPIDR-210	ENST00000519362	LRRC32	Q14392	662 aa		11.74	□□□□□ -0.53
SPIDR-210	ENST00000519362	COL19A1	Q14993	1142 aa		11.74	□□□□□ -0.53
SPIDR-210	ENST00000519362	MAPK11	Q15759	364 aa		11.74	□□□□□ -0.53
SPIDR-210	ENST00000519362	GTF2IRD2B	Q6EKJ0	949 aa		11.74	□□□□□ -0.53
SPIDR-210	ENST00000519362	LAIR1	Q6GTX8	287 aa		11.74	□□□□□ -0.53
SPIDR-210	ENST00000519362	ZNF605	Q86T29	641 aa		11.74	□□□□□ -0.53
SPIDR-210	ENST00000519362	GTF2IRD2	Q86UP8	949 aa		11.74	□□□□□ -0.53
SPIDR-210	ENST00000519362	AMIGO1	Q86WK6	493 aa		11.74	□□□□□ -0.53
SPIDR-210	ENST00000519362	CCDC71	Q8IV32	467 aa	Predicted RBP	11.74	□□□□□ -0.53
SPIDR-210	ENST00000519362	MFSD9	Q8NBP5	474 aa		11.74	□□□□□ -0.53
SPIDR-210	ENST00000519362	OR2L5	Q8NG80	312 aa		11.74	□□□□□ -0.53
SPIDR-210	ENST00000519362	CNIH3	Q8TBE1	160 aa		11.74	□□□□□ -0.53
SPIDR-210	ENST00000519362	APOBEC4	Q8WW27	367 aa	Known RBP	11.74	□□□□□ -0.53
SPIDR-210	ENST00000519362	KCNC2	Q96PR1	638 aa		11.74	□□□□□ -0.53
SPIDR-210	ENST00000519362	MACROD1	Q9BQ69	325 aa		11.74	□□□□□ -0.53
SPIDR-210	ENST00000519362	GLIPR2	Q9H4G4	154 aa		11.74	□□□□□ -0.53
SPIDR-210	ENST00000519362	FANCE	Q9HB96	536 aa		11.74	□□□□□ -0.53
SPIDR-210	ENST00000519362	ZNF624	Q9P2J8	865 aa	Predicted RBP	11.74	□□□□□ -0.53
SPIDR-210	ENST00000519362	RAB23	Q9ULC3	237 aa		11.74	□□□□□ -0.53
SPIDR-210	ENST00000519362		A6NCN8	305 aa		11.73	□□□□□ -0.53
SPIDR-210	ENST00000519362		A8MVJ9	347 aa		11.73	□□□□□ -0.53
SPIDR-210	ENST00000519362	HMGN4	O00479	90 aa		11.73	□□□□□ -0.53
SPIDR-210	ENST00000519362	MAN2B1	O00754	1011 aa		11.73	□□□□□ -0.53
SPIDR-210	ENST00000519362	TNFRSF10C	O14798	259 aa		11.73	□□□□□ -0.53
SPIDR-210	ENST00000519362	ERI3	O43414	337 aa	Known RBP	11.73	□□□□□ -0.53
SPIDR-210	ENST00000519362	ANGPTL1	O95841	491 aa		11.73	□□□□□ -0.53
SPIDR-210	ENST00000519362	CHRM5	P08912	532 aa	Predicted RBP	11.73	□□□□□ -0.53
SPIDR-210	ENST00000519362	JUND	P17535	347 aa		11.73	□□□□□ -0.53
SPIDR-210	ENST00000519362	HTR1B	P28222	390 aa		11.73	□□□□□ -0.53
SPIDR-210	ENST00000519362	TSFM	P43897	325 aa	Known RBP	11.73	□□□□□ -0.53
SPIDR-210	ENST00000519362	LIMS1	P48059	325 aa		11.73	□□□□□ -0.53
SPIDR-210	ENST00000519362	PXN	P49023	591 aa	Predicted RBP	11.73	□□□□□ -0.53
SPIDR-210	ENST00000519362	CCT3	P49368	545 aa	Known RBP	11.73	□□□□□ -0.53
SPIDR-210	ENST00000519362	HMGA2	P52926	109 aa		11.73	□□□□□ -0.53
SPIDR-210	ENST00000519362	SLC9A5	Q14940	896 aa		11.73	□□□□□ -0.53
SPIDR-210	ENST00000519362	DUSP7	Q16829	419 aa		11.73	□□□□□ -0.53
SPIDR-210	ENST00000519362	GPR107	Q5VW38	600 aa		11.73	□□□□□ -0.53
SPIDR-210	ENST00000519362	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	11.73	□□□□□ -0.53
SPIDR-210	ENST00000519362	KIAA1324	Q6UXG2	1013 aa	Known RBP	11.73	□□□□□ -0.53
SPIDR-210	ENST00000519362	ACOT4	Q8N9L9	421 aa		11.73	□□□□□ -0.53
SPIDR-210	ENST00000519362	SMYD1	Q8NB12	490 aa		11.73	□□□□□ -0.53
SPIDR-210	ENST00000519362	CCL4L1	Q8NHW4	92 aa		11.73	□□□□□ -0.53
SPIDR-210	ENST00000519362	RPLP0P6	Q8NHW5	317 aa		11.73	□□□□□ -0.53
SPIDR-210	ENST00000519362	GIPC3	Q8TF64	312 aa		11.73	□□□□□ -0.53
SPIDR-210	ENST00000519362	LCN9	Q8WX39	176 aa		11.73	□□□□□ -0.53
SPIDR-210	ENST00000519362	JPH3	Q8WXH2	748 aa	Predicted RBP	11.73	□□□□□ -0.53
SPIDR-210	ENST00000519362	AMDHD1	Q96NU7	426 aa		11.73	□□□□□ -0.53
SPIDR-210	ENST00000519362	FEV	Q99581	238 aa		11.73	□□□□□ -0.53
SPIDR-210	ENST00000519362	APOL4	Q9BPW4	351 aa		11.73	□□□□□ -0.53
SPIDR-210	ENST00000519362	FAIM2	Q9BWQ8	316 aa		11.73	□□□□□ -0.53
SPIDR-210	ENST00000519362	SERHL2	Q9H4I8	314 aa		11.73	□□□□□ -0.53
SPIDR-210	ENST00000519362	SLC35C2	Q9NQQ7	365 aa		11.73	□□□□□ -0.53
SPIDR-210	ENST00000519362	TMEM9	Q9P0T7	183 aa		11.73	□□□□□ -0.53
SPIDR-210	ENST00000519362	SNX7	Q9UNH6	387 aa		11.73	□□□□□ -0.53
SPIDR-210	ENST00000519362	PCDHGB1	Q9Y5G3	927 aa		11.73	□□□□□ -0.53
SPIDR-210	ENST00000519362	F5	P12259	2224 aa		11.73	□□□□□ -0.53
SPIDR-210	ENST00000519362	CEP290	O15078	2479 aa		11.73	□□□□□ -0.53
SPIDR-210	ENST00000519362		A0A1W2PR48	441 aa		11.72	□□□□□ -0.53
SPIDR-210	ENST00000519362	SHISA7	A6NL88	538 aa		11.72	□□□□□ -0.53
SPIDR-210	ENST00000519362		H3BMQ9	156 aa		11.72	□□□□□ -0.53
SPIDR-210	ENST00000519362	ATE1	O95260	518 aa		11.72	□□□□□ -0.53
SPIDR-210	ENST00000519362	STATH	P02808	62 aa		11.72	□□□□□ -0.53
SPIDR-210	ENST00000519362	BCHE	P06276	602 aa		11.72	□□□□□ -0.53
SPIDR-210	ENST00000519362	CD247	P20963	164 aa		11.72	□□□□□ -0.53
SPIDR-210	ENST00000519362	MATN1	P21941	496 aa		11.72	□□□□□ -0.53
SPIDR-210	ENST00000519362	PCMT1	P22061	227 aa		11.72	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms