RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 CKMT2P17540 419 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 PLA2G16P53816 162 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 RPS15AP62244 130 aaKnown RBP13.73□□□□□ -0.21
CLN8-204ENST00000519254 CFHR1Q03591 330 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 FOLH1Q04609 750 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 MAP7Q14244 749 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 C16orf72Q14CZ0 275 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 DEFB110Q30KQ9 67 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 CPZQ66K79 652 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 ZNF793Q6ZN11 406 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 RHBDD1Q8TEB9 315 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 FAM162AQ96A26 154 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 MS4A6EQ96DS6 147 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 CNDP2Q96KP4 475 aaKnown RBP13.73□□□□□ -0.21
CLN8-204ENST00000519254 C17orf62Q9BQA9 187 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 NUDT22Q9BRQ3 303 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 EPB41L1Q9H4G0 881 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 MIEF1Q9NQG6 463 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 C1GALT1Q9NS00 363 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 SOHLH2Q9NX45 425 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 ZNF282Q9UDV7 671 aaPredicted RBP13.73□□□□□ -0.21
CLN8-204ENST00000519254 ATXN7L1Q9ULK2 861 aaPredicted RBP13.73□□□□□ -0.21
CLN8-204ENST00000519254 CACNA1HO95180 2353 aa13.72□□□□□ -0.21
CLN8-204ENST00000519254 CDX4O14627 284 aaPredicted RBP13.72□□□□□ -0.21
CLN8-204ENST00000519254 FLRT2O43155 660 aa13.72□□□□□ -0.21
CLN8-204ENST00000519254 SH3BP5O60239 455 aa13.72□□□□□ -0.21
CLN8-204ENST00000519254 RAP2AP10114 183 aa13.72□□□□□ -0.21
CLN8-204ENST00000519254 PNLIPP16233 465 aa13.72□□□□□ -0.21
CLN8-204ENST00000519254 PPIBP23284 216 aaKnown RBP13.72□□□□□ -0.21
CLN8-204ENST00000519254 CCL7P80098 99 aa13.72□□□□□ -0.21
CLN8-204ENST00000519254 COL9A2Q14055 689 aaPredicted RBP13.72□□□□□ -0.21
CLN8-204ENST00000519254 ATP6AP1Q15904 470 aa13.72□□□□□ -0.21
CLN8-204ENST00000519254 VMACQ2NL98 169 aa13.72□□□□□ -0.21
CLN8-204ENST00000519254 FRMPD2BQ6IN97 320 aa13.72□□□□□ -0.21
CLN8-204ENST00000519254 FBXO42Q6P3S6 717 aa13.72□□□□□ -0.21
CLN8-204ENST00000519254 PLXDC1Q8IUK5 500 aa13.72□□□□□ -0.21
CLN8-204ENST00000519254 EPHX4Q8IUS5 362 aa13.72□□□□□ -0.21
CLN8-204ENST00000519254 FBXO30Q8TB52 745 aa13.72□□□□□ -0.21
CLN8-204ENST00000519254 NCLNQ969V3 563 aa13.72□□□□□ -0.21
CLN8-204ENST00000519254 ZFYVE21Q9BQ24 234 aa13.72□□□□□ -0.21
CLN8-204ENST00000519254 DPH2Q9BQC3 489 aaPredicted RBP13.72□□□□□ -0.21
CLN8-204ENST00000519254 FAM60AQ9NP50 221 aa13.72□□□□□ -0.21
CLN8-204ENST00000519254 TMEM9BQ9NQ34 198 aa13.72□□□□□ -0.21
CLN8-204ENST00000519254 PRDM7Q9NQW5 492 aa13.72□□□□□ -0.21
CLN8-204ENST00000519254 GPATCH2Q9NW75 528 aa13.72□□□□□ -0.21
CLN8-204ENST00000519254 PCDHGB2Q9Y5G2 931 aa13.72□□□□□ -0.21
CLN8-204ENST00000519254 FRYLO94915 3013 aa13.72□□□□□ -0.21
CLN8-204ENST00000519254 LOC105369274A0A096LPK9 316 aa13.71□□□□□ -0.21
CLN8-204ENST00000519254 IGHV5-51A0A0C4DH38 117 aa13.71□□□□□ -0.21
CLN8-204ENST00000519254 LOC102723532A0A0G2JNH3 316 aa13.71□□□□□ -0.21
CLN8-204ENST00000519254 A0A1W2PRB8 838 aa13.71□□□□□ -0.21
CLN8-204ENST00000519254 C7orf72A4D263 438 aa13.71□□□□□ -0.21
CLN8-204ENST00000519254 SAC3D1A6NKF1 404 aa13.71□□□□□ -0.21
CLN8-204ENST00000519254 A8MU76 341 aa13.71□□□□□ -0.21
CLN8-204ENST00000519254 H0YJX3 145 aa13.71□□□□□ -0.21
CLN8-204ENST00000519254 SOCS2O14508 198 aa13.71□□□□□ -0.21
CLN8-204ENST00000519254 PRKD3O94806 890 aa13.71□□□□□ -0.21
CLN8-204ENST00000519254 LDOC1O95751 146 aaPredicted RBP13.71□□□□□ -0.21
CLN8-204ENST00000519254 EIF2S1P05198 315 aaKnown RBP13.71□□□□□ -0.21
CLN8-204ENST00000519254 MLLT3P42568 568 aaPredicted RBP13.71□□□□□ -0.21
CLN8-204ENST00000519254 SSR2P43308 183 aa13.71□□□□□ -0.21
CLN8-204ENST00000519254 GSTM5P46439 218 aa13.71□□□□□ -0.21
CLN8-204ENST00000519254 SEPHS1P49903 392 aa13.71□□□□□ -0.21
CLN8-204ENST00000519254 DUSP3P51452 185 aaPredicted RBP13.71□□□□□ -0.21
CLN8-204ENST00000519254 MVDP53602 400 aa13.71□□□□□ -0.21
CLN8-204ENST00000519254 TRA2BP62995 288 aaKnown RBP13.71□□□□□ -0.21
CLN8-204ENST00000519254 CHRNB3Q05901 458 aa13.71□□□□□ -0.21
CLN8-204ENST00000519254 HEPACAMQ14CZ8 416 aa13.71□□□□□ -0.21
CLN8-204ENST00000519254 RGNQ15493 299 aa13.71□□□□□ -0.21
CLN8-204ENST00000519254 FAM98BQ52LJ0 330 aaKnown RBP13.71□□□□□ -0.21
CLN8-204ENST00000519254 TOR1AIP1Q5JTV8 583 aa13.71□□□□□ -0.21
CLN8-204ENST00000519254 PPP4R4Q6NUP7 873 aa13.71□□□□□ -0.21
CLN8-204ENST00000519254 FAM180BQ6P0A1 224 aa13.71□□□□□ -0.21
CLN8-204ENST00000519254 ABHD17CQ6PCB6 329 aa13.71□□□□□ -0.21
CLN8-204ENST00000519254 OR4N4Q8N0Y3 316 aa13.71□□□□□ -0.21
CLN8-204ENST00000519254 RERGQ96A58 199 aaPredicted RBP13.71□□□□□ -0.21
CLN8-204ENST00000519254 UGT2B28Q9BY64 529 aa13.71□□□□□ -0.21
CLN8-204ENST00000519254 RAB33BQ9H082 229 aa13.71□□□□□ -0.21
CLN8-204ENST00000519254 PARD6AQ9NPB6 346 aa13.71□□□□□ -0.21
CLN8-204ENST00000519254 SLAMF7Q9NQ25 335 aa13.71□□□□□ -0.21
CLN8-204ENST00000519254 OLAHQ9NV23 265 aa13.71□□□□□ -0.21
CLN8-204ENST00000519254 TEX10Q9NXF1 929 aaPredicted RBP13.71□□□□□ -0.21
CLN8-204ENST00000519254 TAS2R9Q9NYW1 312 aa13.71□□□□□ -0.21
CLN8-204ENST00000519254 FTSJ1Q9UET6 329 aa13.71□□□□□ -0.21
CLN8-204ENST00000519254 EPHA6Q9UF33 1036 aa13.71□□□□□ -0.21
CLN8-204ENST00000519254 PILRAQ9UKJ1 303 aa13.71□□□□□ -0.21
CLN8-204ENST00000519254 PCDHGB4Q9UN71 923 aa13.71□□□□□ -0.21
CLN8-204ENST00000519254 CORO2BQ9UQ03 480 aa13.71□□□□□ -0.21
CLN8-204ENST00000519254 KLK4Q9Y5K2 254 aa13.71□□□□□ -0.21
CLN8-204ENST00000519254 ERI3O43414 337 aaKnown RBP13.71□□□□□ -0.22
CLN8-204ENST00000519254 DENRO43583 198 aaKnown RBP13.71□□□□□ -0.22
CLN8-204ENST00000519254 HCRTR1O43613 425 aa13.71□□□□□ -0.22
CLN8-204ENST00000519254 SERPINA1P01009 418 aa13.71□□□□□ -0.22
CLN8-204ENST00000519254 NTRK1P04629 796 aa13.71□□□□□ -0.22
CLN8-204ENST00000519254 NUDT7P0C024 238 aa13.71□□□□□ -0.22
CLN8-204ENST00000519254 CSRP2Q16527 193 aa13.71□□□□□ -0.22
CLN8-204ENST00000519254 NRF1Q16656 503 aa13.71□□□□□ -0.22
CLN8-204ENST00000519254 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.71□□□□□ -0.22
CLN8-204ENST00000519254 ERICH5Q6P6B1 374 aa13.71□□□□□ -0.22
CLN8-204ENST00000519254 ZBTB49Q6ZSB9 765 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms