RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-209ENST00000519141 C9P02748 559 aa11.71□□□□□ -0.53
SPIDR-209ENST00000519141 PNLIPP16233 465 aa11.71□□□□□ -0.53
SPIDR-209ENST00000519141 NCK1P16333 377 aa11.71□□□□□ -0.53
SPIDR-209ENST00000519141 CSF2RBP32927 897 aa11.71□□□□□ -0.53
SPIDR-209ENST00000519141 FRKP42685 505 aaPredicted RBP11.71□□□□□ -0.53
SPIDR-209ENST00000519141 ARL4DP49703 201 aa11.71□□□□□ -0.53
SPIDR-209ENST00000519141 MANFP55145 182 aaKnown RBP11.71□□□□□ -0.53
SPIDR-209ENST00000519141 SNRPNP63162 240 aaKnown RBP11.71□□□□□ -0.53
SPIDR-209ENST00000519141 TNFRSF17Q02223 184 aa11.71□□□□□ -0.53
SPIDR-209ENST00000519141 SLC14A1Q13336 389 aa11.71□□□□□ -0.53
SPIDR-209ENST00000519141 C18orf63Q68DL7 685 aa11.71□□□□□ -0.53
SPIDR-209ENST00000519141 FAM180BQ6P0A1 224 aa11.71□□□□□ -0.53
SPIDR-209ENST00000519141 SLC48A1Q6P1K1 146 aa11.71□□□□□ -0.53
SPIDR-209ENST00000519141 ANGPTL8Q6UXH0 198 aa11.71□□□□□ -0.53
SPIDR-209ENST00000519141 SERPINA11Q86U17 422 aa11.71□□□□□ -0.53
SPIDR-209ENST00000519141 CALHM3Q86XJ0 350 aa11.71□□□□□ -0.53
SPIDR-209ENST00000519141 SPPL2CQ8IUH8 684 aa11.71□□□□□ -0.53
SPIDR-209ENST00000519141 DTWD1Q8N5C7 304 aa11.71□□□□□ -0.53
SPIDR-209ENST00000519141 FAM181AQ8N9Y4 354 aa11.71□□□□□ -0.53
SPIDR-209ENST00000519141 GOLM1Q8NBJ4 401 aa11.71□□□□□ -0.53
SPIDR-209ENST00000519141 OR2I1PQ8NGU4 316 aa11.71□□□□□ -0.53
SPIDR-209ENST00000519141 ZFP28Q8NHY6 868 aa11.71□□□□□ -0.53
SPIDR-209ENST00000519141 PNPT1Q8TCS8 783 aaKnown RBP11.71□□□□□ -0.53
SPIDR-209ENST00000519141 ZFP90Q8TF47 636 aa11.71□□□□□ -0.53
SPIDR-209ENST00000519141 REXO5Q96IC2 774 aaKnown RBP11.71□□□□□ -0.53
SPIDR-209ENST00000519141 BBS4Q96RK4 519 aa11.71□□□□□ -0.53
SPIDR-209ENST00000519141 SLC35A5Q9BS91 424 aa11.71□□□□□ -0.53
SPIDR-209ENST00000519141 SLAMF7Q9NQ25 335 aa11.71□□□□□ -0.53
SPIDR-209ENST00000519141 SLC35C2Q9NQQ7 365 aa11.71□□□□□ -0.53
SPIDR-209ENST00000519141 STARD5Q9NSY2 213 aa11.71□□□□□ -0.53
SPIDR-209ENST00000519141 ACSS1Q9NUB1 689 aaPredicted RBP11.71□□□□□ -0.53
SPIDR-209ENST00000519141 GIMAP4Q9NUV9 329 aa11.71□□□□□ -0.53
SPIDR-209ENST00000519141 IRAK4Q9NWZ3 460 aa11.71□□□□□ -0.53
SPIDR-209ENST00000519141 MS4A12Q9NXJ0 267 aa11.71□□□□□ -0.53
SPIDR-209ENST00000519141 ENTPD4Q9Y227 616 aa11.71□□□□□ -0.53
SPIDR-209ENST00000519141 GMEB1Q9Y692 573 aa11.71□□□□□ -0.53
SPIDR-209ENST00000519141 SPACA6W5XKT8 324 aa11.71□□□□□ -0.53
SPIDR-209ENST00000519141 CPED1A4D0V7 1026 aa11.71□□□□□ -0.54
SPIDR-209ENST00000519141 ZNF860A6NHJ4 632 aa11.71□□□□□ -0.54
SPIDR-209ENST00000519141 H3BNX3 289 aa11.71□□□□□ -0.54
SPIDR-209ENST00000519141 PGRMC2O15173 223 aa11.71□□□□□ -0.54
SPIDR-209ENST00000519141 GALR3O60755 368 aaPredicted RBP11.71□□□□□ -0.54
SPIDR-209ENST00000519141 ERAL1O75616 437 aaKnown RBP11.71□□□□□ -0.54
SPIDR-209ENST00000519141 GPX2P18283 190 aa11.71□□□□□ -0.54
SPIDR-209ENST00000519141 GGT1P19440 569 aa11.71□□□□□ -0.54
SPIDR-209ENST00000519141 UQCRC2P22695 453 aa11.71□□□□□ -0.54
SPIDR-209ENST00000519141 CPN2P22792 545 aa11.71□□□□□ -0.54
SPIDR-209ENST00000519141 CD1CP29017 333 aa11.71□□□□□ -0.54
SPIDR-209ENST00000519141 TLX1P31314 330 aaPredicted RBP11.71□□□□□ -0.54
SPIDR-209ENST00000519141 CHI3L1P36222 383 aaPredicted RBP11.71□□□□□ -0.54
SPIDR-209ENST00000519141 MPLP40238 635 aa11.71□□□□□ -0.54
SPIDR-209ENST00000519141 GABRA4P48169 554 aa11.71□□□□□ -0.54
SPIDR-209ENST00000519141 LIM2P55344 173 aa11.71□□□□□ -0.54
SPIDR-209ENST00000519141 PCBP4P57723 403 aaKnown RBP11.71□□□□□ -0.54
SPIDR-209ENST00000519141 SKP1P63208 163 aa11.71□□□□□ -0.54
SPIDR-209ENST00000519141 NDUFA9Q16795 377 aa11.71□□□□□ -0.54
SPIDR-209ENST00000519141 PRTGQ2VWP7 1150 aa11.71□□□□□ -0.54
SPIDR-209ENST00000519141 GLYATQ6IB77 296 aa11.71□□□□□ -0.54
SPIDR-209ENST00000519141 WDR74Q6RFH5 385 aaPredicted RBP11.71□□□□□ -0.54
SPIDR-209ENST00000519141 USP53Q70EK8 1073 aa11.71□□□□□ -0.54
SPIDR-209ENST00000519141 GPR155Q7Z3F1 870 aa11.71□□□□□ -0.54
SPIDR-209ENST00000519141 EID2Q8N6I1 236 aa11.71□□□□□ -0.54
SPIDR-209ENST00000519141 KLHL6Q8WZ60 621 aa11.71□□□□□ -0.54
SPIDR-209ENST00000519141 NAT6Q93015 286 aa11.71□□□□□ -0.54
SPIDR-209ENST00000519141 UCN3Q969E3 161 aa11.71□□□□□ -0.54
SPIDR-209ENST00000519141 LOXL4Q96JB6 756 aa11.71□□□□□ -0.54
SPIDR-209ENST00000519141 NSMCE2Q96MF7 247 aa11.71□□□□□ -0.54
SPIDR-209ENST00000519141 SPATA9Q9BWV2 254 aa11.71□□□□□ -0.54
SPIDR-209ENST00000519141 GTPBP2Q9BX10 602 aaKnown RBP11.71□□□□□ -0.54
SPIDR-209ENST00000519141 RAD21L1Q9H4I0 556 aa11.71□□□□□ -0.54
SPIDR-209ENST00000519141 ANKHQ9HCJ1 492 aa11.71□□□□□ -0.54
SPIDR-209ENST00000519141 LYRM4Q9HD34 91 aa11.71□□□□□ -0.54
SPIDR-209ENST00000519141 DNAAF2Q9NVR5 837 aaKnown RBP11.71□□□□□ -0.54
SPIDR-209ENST00000519141 PSME2Q9UL46 239 aa11.71□□□□□ -0.54
SPIDR-209ENST00000519141 DAPP1Q9UN19 280 aa11.71□□□□□ -0.54
SPIDR-209ENST00000519141 NAALAD2Q9Y3Q0 740 aa11.71□□□□□ -0.54
SPIDR-209ENST00000519141 LY6G6EA0A0G2JKS1 128 aa11.7□□□□□ -0.54
SPIDR-209ENST00000519141 RNF103-CHMP3A0A140T963 221 aa11.7□□□□□ -0.54
SPIDR-209ENST00000519141 KRT75O95678 551 aa11.7□□□□□ -0.54
SPIDR-209ENST00000519141 NTRK1P04629 796 aa11.7□□□□□ -0.54
SPIDR-209ENST00000519141 PSMA4P25789 261 aaKnown RBP11.7□□□□□ -0.54
SPIDR-209ENST00000519141 GZMMP51124 257 aa11.7□□□□□ -0.54
SPIDR-209ENST00000519141 POLE2P56282 527 aa11.7□□□□□ -0.54
SPIDR-209ENST00000519141 OLR1P78380 273 aa11.7□□□□□ -0.54
SPIDR-209ENST00000519141 HSD11B2P80365 405 aa11.7□□□□□ -0.54
SPIDR-209ENST00000519141 CFHR1Q03591 330 aa11.7□□□□□ -0.54
SPIDR-209ENST00000519141 HSPB3Q12988 150 aa11.7□□□□□ -0.54
SPIDR-209ENST00000519141 RUNX2Q13950 521 aa11.7□□□□□ -0.54
SPIDR-209ENST00000519141 SPIDRQ14159 915 aa11.7□□□□□ -0.54
SPIDR-209ENST00000519141 MLC1Q15049 377 aa11.7□□□□□ -0.54
SPIDR-209ENST00000519141 MTX3Q5HYI7 312 aa11.7□□□□□ -0.54
SPIDR-209ENST00000519141 TCTE1Q5JU00 501 aa11.7□□□□□ -0.54
SPIDR-209ENST00000519141 SNAP47Q5SQN1 464 aa11.7□□□□□ -0.54
SPIDR-209ENST00000519141 OR52E8Q6IFG1 317 aa11.7□□□□□ -0.54
SPIDR-209ENST00000519141 GUSBP11Q6P575 273 aa11.7□□□□□ -0.54
SPIDR-209ENST00000519141 ERICH5Q6P6B1 374 aa11.7□□□□□ -0.54
SPIDR-209ENST00000519141 PRSS41Q7RTY9 318 aa11.7□□□□□ -0.54
SPIDR-209ENST00000519141 ZNF551Q7Z340 670 aaPredicted RBP11.7□□□□□ -0.54
SPIDR-209ENST00000519141 PRSS42Q7Z5A4 293 aa11.7□□□□□ -0.54
SPIDR-209ENST00000519141 PDSS2Q86YH6 399 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms