RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 TPP2P29144 1249 aaPredicted RBP12.41□□□□□ -0.42
VEGFA-219ENST00000518824 FOXA1P55317 472 aa12.41□□□□□ -0.42
VEGFA-219ENST00000518824 TNFRSF17Q02223 184 aa12.41□□□□□ -0.42
VEGFA-219ENST00000518824 SLC18A2Q05940 514 aa12.41□□□□□ -0.42
VEGFA-219ENST00000518824 MEP1AQ16819 746 aa12.41□□□□□ -0.42
VEGFA-219ENST00000518824 WDR93Q6P2C0 686 aa12.41□□□□□ -0.42
VEGFA-219ENST00000518824 SCIMPQ6UWF3 145 aa12.41□□□□□ -0.42
VEGFA-219ENST00000518824 CLEC18BQ6UXF7 455 aa12.41□□□□□ -0.42
VEGFA-219ENST00000518824 ZYG11AQ6WRX3 759 aa12.41□□□□□ -0.42
VEGFA-219ENST00000518824 GPR180Q86V85 440 aa12.41□□□□□ -0.42
VEGFA-219ENST00000518824 RPS19BP1Q86WX3 136 aaKnown RBP12.41□□□□□ -0.42
VEGFA-219ENST00000518824 CLEC18CQ8NCF0 446 aa12.41□□□□□ -0.42
VEGFA-219ENST00000518824 GALNT11Q8NCW6 608 aa12.41□□□□□ -0.42
VEGFA-219ENST00000518824 MDS2Q8NDY4 140 aa12.41□□□□□ -0.42
VEGFA-219ENST00000518824 B3GNT7Q8NFL0 401 aa12.41□□□□□ -0.42
VEGFA-219ENST00000518824 ADAMTS18Q8TE60 1221 aa12.41□□□□□ -0.42
VEGFA-219ENST00000518824 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.41□□□□□ -0.425e-12■■■■■ 41.4
VEGFA-219ENST00000518824 PPWD1Q96BP3 646 aaKnown RBP12.41□□□□□ -0.42
VEGFA-219ENST00000518824 L3HYPDHQ96EM0 354 aa12.41□□□□□ -0.42
VEGFA-219ENST00000518824 PARD6BQ9BYG5 372 aa12.41□□□□□ -0.42
VEGFA-219ENST00000518824 RNF32Q9H0A6 362 aa12.41□□□□□ -0.42
VEGFA-219ENST00000518824 DDX31Q9H8H2 851 aaKnown RBP12.41□□□□□ -0.42
VEGFA-219ENST00000518824 ADAP2Q9NPF8 381 aa12.41□□□□□ -0.42
VEGFA-219ENST00000518824 VTI1BQ9UEU0 232 aa12.41□□□□□ -0.42
VEGFA-219ENST00000518824 MRPS33Q9Y291 106 aaKnown RBP12.41□□□□□ -0.42
VEGFA-219ENST00000518824 TIMM22Q9Y584 194 aa12.41□□□□□ -0.42
VEGFA-219ENST00000518824 FLNCQ14315 2725 aa12.4□□□□□ -0.42
VEGFA-219ENST00000518824 ESPL1Q14674 2120 aa12.4□□□□□ -0.42
VEGFA-219ENST00000518824 MANBAO00462 879 aa12.4□□□□□ -0.42
VEGFA-219ENST00000518824 PGRMC2O15173 223 aa12.4□□□□□ -0.42
VEGFA-219ENST00000518824 CDH16O75309 829 aa12.4□□□□□ -0.42
VEGFA-219ENST00000518824 VPS4BO75351 444 aa12.4□□□□□ -0.42
VEGFA-219ENST00000518824 NEURL1O76050 574 aa12.4□□□□□ -0.42
VEGFA-219ENST00000518824 AIFM1O95831 613 aa12.4□□□□□ -0.42
VEGFA-219ENST00000518824 KLK1P06870 262 aa12.4□□□□□ -0.42
VEGFA-219ENST00000518824 NUDT17P0C025 328 aa12.4□□□□□ -0.42
VEGFA-219ENST00000518824 FAM58BPP0C7Q3 252 aa12.4□□□□□ -0.42
VEGFA-219ENST00000518824 KRT4P19013 534 aa12.4□□□□□ -0.42
VEGFA-219ENST00000518824 CRHR1P34998 444 aa12.4□□□□□ -0.42
VEGFA-219ENST00000518824 MLF1P58340 268 aa12.4□□□□□ -0.42
VEGFA-219ENST00000518824 PHEXP78562 749 aa12.4□□□□□ -0.42
VEGFA-219ENST00000518824 IGLV3-21P80748 117 aaPredicted RBP12.4□□□□□ -0.42
VEGFA-219ENST00000518824 FOLH1Q04609 750 aa12.4□□□□□ -0.42
VEGFA-219ENST00000518824 GALNT1Q10472 559 aaPredicted RBP12.4□□□□□ -0.42
VEGFA-219ENST00000518824 TBL3Q12788 808 aaKnown RBP12.4□□□□□ -0.42
VEGFA-219ENST00000518824 IFT88Q13099 833 aa12.4□□□□□ -0.42
VEGFA-219ENST00000518824 RASA2Q15283 850 aa12.4□□□□□ -0.42
VEGFA-219ENST00000518824 GPRIN3Q6ZVF9 776 aa12.4□□□□□ -0.42
VEGFA-219ENST00000518824 LCA5Q86VQ0 697 aa12.4□□□□□ -0.42
VEGFA-219ENST00000518824 ATCAYQ86WG3 371 aa12.4□□□□□ -0.42
VEGFA-219ENST00000518824 CCNYL1Q8N7R7 359 aa12.4□□□□□ -0.42
VEGFA-219ENST00000518824 SELENOMQ8WWX9 145 aa12.4□□□□□ -0.42
VEGFA-219ENST00000518824 CAVIN3Q969G5 261 aa12.4□□□□□ -0.42
VEGFA-219ENST00000518824 ZNF382Q96SR6 550 aa12.4□□□□□ -0.42
VEGFA-219ENST00000518824 SERPINI1Q99574 410 aa12.4□□□□□ -0.42
VEGFA-219ENST00000518824 ELOVL6Q9H5J4 265 aa12.4□□□□□ -0.42
VEGFA-219ENST00000518824 RPF2Q9H7B2 306 aaKnown RBP12.4□□□□□ -0.42
VEGFA-219ENST00000518824 KLHL1Q9NR64 748 aa12.4□□□□□ -0.42
VEGFA-219ENST00000518824 PSD3Q9NYI0 1048 aa12.4□□□□□ -0.42
VEGFA-219ENST00000518824 TRPS1Q9UHF7 1281 aa12.4□□□□□ -0.42
VEGFA-219ENST00000518824 PPT2Q9UMR5 302 aa12.4□□□□□ -0.42
VEGFA-219ENST00000518824 VPS4AQ9UN37 437 aa12.4□□□□□ -0.42
VEGFA-219ENST00000518824 PPIEQ9UNP9 301 aaKnown RBP12.4□□□□□ -0.42
VEGFA-219ENST00000518824 SLC12A4Q9UP95 1085 aa12.4□□□□□ -0.42
VEGFA-219ENST00000518824 PRRC2CQ9Y520 2896 aaKnown RBP12.4□□□□□ -0.42
VEGFA-219ENST00000518824 TRAV17A0A0B4J275 112 aa12.39□□□□□ -0.43
VEGFA-219ENST00000518824 ZNF354AO60765 605 aaPredicted RBP12.39□□□□□ -0.43
VEGFA-219ENST00000518824 PRAMEF2O60811 474 aa12.39□□□□□ -0.43
VEGFA-219ENST00000518824 SEMA7AO75326 666 aa12.39□□□□□ -0.43
VEGFA-219ENST00000518824 SPAG7O75391 227 aa12.39□□□□□ -0.43
VEGFA-219ENST00000518824 SEMA3DO95025 777 aa12.39□□□□□ -0.43
VEGFA-219ENST00000518824 MYL2P10916 166 aa12.39□□□□□ -0.43
VEGFA-219ENST00000518824 MST1P26927 711 aa12.39□□□□□ -0.43
VEGFA-219ENST00000518824 SERPINB3P29508 390 aa12.39□□□□□ -0.43
VEGFA-219ENST00000518824 CLCN2P51788 898 aa12.39□□□□□ -0.43
VEGFA-219ENST00000518824 NAGLUP54802 743 aa12.39□□□□□ -0.43
VEGFA-219ENST00000518824 AP2B1P63010 937 aa12.39□□□□□ -0.43
VEGFA-219ENST00000518824 STX4Q12846 297 aa12.39□□□□□ -0.43
VEGFA-219ENST00000518824 OR1C1Q15619 314 aa12.39□□□□□ -0.43
VEGFA-219ENST00000518824 ELAVL1Q15717 326 aaKnown RBP12.39□□□□□ -0.43
VEGFA-219ENST00000518824 ZNF750Q32MQ0 723 aa12.39□□□□□ -0.43
VEGFA-219ENST00000518824 ZNF766Q5HY98 468 aa12.39□□□□□ -0.43
VEGFA-219ENST00000518824 ZNF324BQ6AW86 544 aaPredicted RBP12.39□□□□□ -0.43
VEGFA-219ENST00000518824 CYP20A1Q6UW02 462 aa12.39□□□□□ -0.43
VEGFA-219ENST00000518824 COMMD6Q7Z4G1 85 aa12.39□□□□□ -0.43
VEGFA-219ENST00000518824 TRABD2AQ86V40 505 aa12.39□□□□□ -0.43
VEGFA-219ENST00000518824 NUDT13Q86X67 352 aa12.39□□□□□ -0.43
VEGFA-219ENST00000518824 SLC22A9Q8IVM8 553 aa12.39□□□□□ -0.43
VEGFA-219ENST00000518824 METTL4Q8N3J2 472 aa12.39□□□□□ -0.43
VEGFA-219ENST00000518824 SLC5A8Q8N695 610 aa12.39□□□□□ -0.43
VEGFA-219ENST00000518824 AGAP11Q8TF27 550 aa12.39□□□□□ -0.43
VEGFA-219ENST00000518824 FAR1Q8WVX9 515 aa12.39□□□□□ -0.43
VEGFA-219ENST00000518824 DEFB126Q9BYW3 111 aa12.39□□□□□ -0.43
VEGFA-219ENST00000518824 SHCBP1LQ9BZQ2 653 aa12.39□□□□□ -0.43
VEGFA-219ENST00000518824 OR8D2Q9GZM6 311 aa12.39□□□□□ -0.43
VEGFA-219ENST00000518824 SLC17A7Q9P2U7 560 aa12.39□□□□□ -0.43
VEGFA-219ENST00000518824 TEKT2Q9UIF3 430 aa12.39□□□□□ -0.43
VEGFA-219ENST00000518824 SVILO95425 2214 aa12.39□□□□□ -0.43
VEGFA-219ENST00000518824 ZGRF1Q86YA3 2104 aa12.38□□□□□ -0.43
VEGFA-219ENST00000518824 EML6Q6ZMW3 1958 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms