RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 PIGRP01833 764 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 HMGCRP04035 888 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 CSF3P09919 207 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 GLI4P10075 376 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 RALAP11233 206 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 G6PDP11413 515 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 FGF3P11487 239 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 ODC1P11926 461 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 MYCLP12524 364 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 ADRB3P13945 408 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 CYP2B6P20813 491 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 LHCGRP22888 699 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 AKAP5P24588 427 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 FPR3P25089 353 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 GIFP27352 417 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 MAPK3P27361 379 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 ELK4P28324 431 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 S100A2P29034 98 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 PPP2R1BP30154 601 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 SSTR1P30872 391 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 YWHABP31946 246 aaKnown RBP4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 PCGF2P35227 344 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 PPM1AP35813 382 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 CHRNA7P36544 502 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 SERPINF1P36955 418 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 MMP12P39900 470 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 BCL6P41182 706 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 STAT5AP42229 794 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 RAD52P43351 418 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 RFX2P48378 723 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 CSNK1EP49674 416 aaKnown RBP4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 DIO1P49895 249 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 GNG10P50151 68 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 CCR4P51679 360 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 ACLYP53396 1101 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 ADPRHP54922 357 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 GFRA1P56159 465 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 ARPP19P56211 112 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 CLDN20P56880 219 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 HUNKP57058 714 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 SLC26A5P58743 744 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 ACTR1AP61163 376 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 SNRPD2P62316 118 aaKnown RBP4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 RPL11P62913 178 aaKnown RBP4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 HTRA4P83105 476 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 DEFA5Q01523 94 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 SP2Q02086 613 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 MAD2L1Q13257 205 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 GPR17Q13304 367 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 KEAP1Q14145 624 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 GRB7Q14451 532 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 UBXN2BQ14CS0 331 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 SF3A2Q15428 464 aaKnown RBP4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 IL17AQ16552 155 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 ZNF239Q16600 458 aaKnown RBP4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 HAGHQ16775 308 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 SYT16Q17RD7 645 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 HFEQ30201 348 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 CHRFAM7AQ494W8 412 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 TRIM61Q5EBN2 209 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 ATPAF1Q5TC12 328 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 LIPJQ5W064 366 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 TRIQKQ629K1 86 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 REP15Q6BDI9 236 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 DHRS7BQ6IAN0 325 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 OR5M10Q6IEU7 315 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 ESRP1Q6NXG1 681 aaKnown RBP4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 MZT2AQ6P582 158 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 FAM199XQ6PEV8 388 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 KLHL24Q6TFL4 600 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 P4HA3Q7Z4N8 544 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 DCXRQ7Z4W1 244 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 BMP8AQ7Z5Y6 402 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 CAMKMTQ7Z624 323 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 TPRA1Q86W33 373 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 ZDHHC17Q8IUH5 632 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 GID4Q8IVV7 300 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 ZBTB8OSQ8IWT0 167 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 FAM71AQ8IYT1 594 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 OFCC1Q8IZS5 231 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 MS4A15Q8N5U1 240 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 ZNF321PQ8N8H1 164 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 KREMEN2Q8NCW0 462 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 OR2T4Q8NH00 348 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 POC1BQ8TC44 478 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 CREB3L4Q8TEY5 395 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 SELENOMQ8WWX9 145 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 ACOT11Q8WXI4 607 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 ADAMTS14Q8WXS8 1223 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 SLC5A5Q92911 643 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 LRRC46Q96FV0 321 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 SCRN2Q96FV2 425 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 OTUB1Q96FW1 271 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 CDKN2AIPNLQ96HQ2 116 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 FAM84BQ96KN1 310 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 NOL4LQ96MY1 436 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 KLHL5Q96PQ7 755 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 SLC38A2Q96QD8 506 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 CYP2S1Q96SQ9 504 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 PCDHB18PQ96TA0 734 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms