RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 COPS7AQ9UBW8 275 aa2.9□□□□□ -1.95
RNU6-840P-201ENST00000517275 MRTO4Q9UKD2 239 aaKnown RBP2.9□□□□□ -1.95
RNU6-840P-201ENST00000517275 MGAT4BQ9UQ53 548 aa2.9□□□□□ -1.95
RNU6-840P-201ENST00000517275 NUDCQ9Y266 331 aa2.9□□□□□ -1.95
RNU6-840P-201ENST00000517275 OR1A2Q9Y585 309 aa2.9□□□□□ -1.95
RNU6-840P-201ENST00000517275 DDX49Q9Y6V7 483 aaKnown RBP2.9□□□□□ -1.95
RNU6-840P-201ENST00000517275 NEDD4P46934 1319 aa2.9□□□□□ -1.95
RNU6-840P-201ENST00000517275 EME2A4GXA9 379 aaPredicted RBP2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 RNF222A6NCQ9 220 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 TRIM49BA6NDI0 452 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 BLOC1S5-TXNDC5H3BN57 136 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 PCDH7O60245 1069 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 CIDEAO60543 219 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 CSO75390 466 aaKnown RBP2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 CDC123O75794 336 aaPredicted RBP2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 IDH1O75874 414 aaKnown RBP2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 NGFP01138 241 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 NCF1P14598 390 aaPredicted RBP2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 HTR2AP28223 471 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 PRDX6P30041 224 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 PRDX2P32119 198 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 OTX2P32243 289 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 ZFP36L2P47974 494 aaKnown RBP2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 NDST1P52848 882 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 LIMK2P53671 638 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 BACE1P56817 501 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 NLRP11P59045 1033 aaKnown RBP2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 TRA2BP62995 288 aaKnown RBP2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 NME3Q13232 169 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 C3AR1Q16581 482 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 HAGHQ16775 308 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 LRIT3Q3SXY7 679 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 GTDC1Q4AE62 458 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 RFTN2Q52LD8 501 aaPredicted RBP2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 AGKQ53H12 422 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 ARHGAP17Q68EM7 881 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 LRRC8BQ6P9F7 803 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 TRIM65Q6PJ69 517 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 ISLR2Q6UXK2 745 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 SPATA31D1Q6ZQQ2 1576 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 RFPL4BQ6ZWI9 263 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 ITIH5Q86UX2 942 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 VPS36Q86VN1 386 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 ZNF573Q86YE8 665 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 LACC1Q8IV20 430 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 DCLK2Q8N568 766 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 GVQW1Q8N7I0 195 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 CCDC197Q8NCU1 140 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 GPRC5AQ8NFJ5 357 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 OR10V1Q8NGI7 309 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 OR5M9Q8NGP3 310 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 RDH11Q8TC12 318 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 TMEM190Q8WZ59 177 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 SMPDL3AQ92484 453 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 C11orf52Q96A22 123 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 SLC25A36Q96CQ1 311 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 CCDC51Q96ER9 411 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 RBM18Q96H35 190 aaKnown RBP2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 CAPNS2Q96L46 248 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 C2orf48Q96LS8 159 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 FAM218AQ96MZ4 157 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 ERGIC2Q96RQ1 377 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 KRT12Q99456 494 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 OVOL2Q9BRP0 275 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 WACQ9BTA9 647 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 THUMPD2Q9BTF0 503 aaKnown RBP2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 FUNDC2Q9BWH2 189 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 HOXD1Q9GZZ0 328 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 MTIF3Q9H2K0 278 aaKnown RBP2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 RIBC2Q9H4K1 309 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 VAT1LQ9HCJ6 419 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 HPS4Q9NQG7 708 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 LHX3Q9UBR4 397 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 CLIP2Q9UDT6 1046 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 BCAP29Q9UHQ4 241 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 KIAA1210Q9ULL0 1709 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 DOCK7Q96N67 2140 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 ARID2Q68CP9 1835 aa2.89□□□□□ -1.95
RNU6-840P-201ENST00000517275 A0A087WW49 117 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 A0A1B0GUL7 405 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 C15orf61A6NNL5 157 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 ANHXE9PGG2 379 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 FAM72CH0Y354 149 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 TSPAN2O60636 221 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 LRCH4O75427 683 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 TOM1L1O75674 476 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 MFN2O95140 757 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 APBB3O95704 486 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 FCER2P06734 321 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 PRSS56P0CW18 603 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 PRKAR1AP10644 381 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 THRBP10828 461 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 RPS2P15880 293 aaKnown RBP2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 CEBPBP17676 345 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 DPP4P27487 766 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 PTPN6P29350 595 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 MAT2AP31153 395 aaKnown RBP2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 GPR183P32249 361 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 SOX6P35712 828 aa2.88□□□□□ -1.95
RNU6-840P-201ENST00000517275 SOX3P41225 446 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms