RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 ARRB2P32121 409 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 LSP1P33241 339 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 S100A3P33764 101 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 EIF2S3P41091 472 aaKnown RBP5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 IDH3AP50213 366 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 XKP51811 444 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 GYS2P54840 703 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 RPS18P62269 152 aaKnown RBP5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 EEF1A2Q05639 463 aaKnown RBP5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 TBL3Q12788 808 aaKnown RBP5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 SF3A3Q12874 501 aaKnown RBP eCLIP5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 LSM12Q3MHD2 195 aaKnown RBP5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 SPDYE7PQ495Y7 208 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 SLC9B1Q4ZJI4 515 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 RFTN2Q52LD8 501 aaPredicted RBP5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 SFT2D3Q587I9 215 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 XKR7Q5GH72 579 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 CPTPQ5TA50 214 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 VWA5B1Q5TIE3 1220 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 ANXA8L1Q5VT79 327 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 HLA-DQA1Q5Y7H0 255 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 C18orf63Q68DL7 685 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 LCN10Q6JVE6 187 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 MRPL14Q6P1L8 145 aaKnown RBP5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 GALNT18Q6P9A2 607 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 EPGNQ6UW88 154 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 FAM198BQ6UWH4 519 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 ZNF793Q6ZN11 406 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 QSOX2Q6ZRP7 698 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 Q6ZSR9 355 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 SPATA21Q7Z572 469 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 CPEB2Q7Z5Q1 589 aaKnown RBP5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 DTX1Q86Y01 620 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 TICAM1Q8IUC6 712 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 TMEM151BQ8IW70 566 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 ZC3H7AQ8IWR0 971 aaKnown RBP5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 SPACA3Q8IXA5 215 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 MIER2Q8N344 545 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 DTWD1Q8N5C7 304 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 ANKS4BQ8N8V4 417 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 AMER3Q8N944 861 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 CLHC1Q8NHS4 586 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 DAZLQ92904 295 aaKnown RBP5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 GATA6Q92908 595 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 GFM2Q969S9 779 aaKnown RBP5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 EXOSC8Q96B26 276 aaKnown RBP5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 NACC2Q96BF6 587 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 TM4SF18Q96CE8 201 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 MTERF3Q96E29 417 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 SLC45A3Q96JT2 553 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 ELAC2Q9BQ52 826 aaKnown RBP5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 TUBB6Q9BUF5 446 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 ALOXE3Q9BYJ1 711 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 SPRY4Q9C004 299 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 TUBB1Q9H4B7 451 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 REEP4Q9H6H4 257 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 WDR55Q9H6Y2 383 aaPredicted RBP5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 SYNPO2LQ9H987 977 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 AKIRIN1Q9H9L7 192 aaPredicted RBP5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 MYNNQ9NPC7 610 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 ATP13A2Q9NQ11 1180 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 SIRT5Q9NXA8 310 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 EHD3Q9NZN3 535 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 ABI3Q9P2A4 366 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 KLHL14Q9P2G3 628 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 POLHQ9Y253 713 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 MAN2B2Q9Y2E5 1009 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 ATG4BQ9Y4P1 393 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 ASB4Q9Y574 426 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 PCDHGA6Q9Y5G7 932 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 PCDHA9Q9Y5H5 950 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 PTGDR2Q9Y5Y4 395 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 MYO15AQ9UKN7 3530 aa5.13□□□□□ -1.59
SCARNA16.4-201ENST00000516956 IGLV3-12A0A075B6K2 115 aa5.12□□□□□ -1.59
SCARNA16.4-201ENST00000516956 VSTM2BA6NLU5 285 aa5.12□□□□□ -1.59
SCARNA16.4-201ENST00000516956 C17orf105B2RV13 164 aa5.12□□□□□ -1.59
SCARNA16.4-201ENST00000516956 C4orf51C9J302 202 aa5.12□□□□□ -1.59
SCARNA16.4-201ENST00000516956 E9PBE3 544 aa5.12□□□□□ -1.59
SCARNA16.4-201ENST00000516956 NPIPB8E9PQR5 432 aa5.12□□□□□ -1.59
SCARNA16.4-201ENST00000516956 EFSO43281 561 aa5.12□□□□□ -1.59
SCARNA16.4-201ENST00000516956 TLX3O43711 291 aaPredicted RBP5.12□□□□□ -1.59
SCARNA16.4-201ENST00000516956 LDB3O75112 727 aa5.12□□□□□ -1.59
SCARNA16.4-201ENST00000516956 BCAS2O75934 225 aaPredicted RBP5.12□□□□□ -1.59
SCARNA16.4-201ENST00000516956 ANP32DO95626 131 aa5.12□□□□□ -1.59
SCARNA16.4-201ENST00000516956 SLC35E2P0CK97 266 aa5.12□□□□□ -1.59
SCARNA16.4-201ENST00000516956 G6PDP11413 515 aa5.12□□□□□ -1.59
SCARNA16.4-201ENST00000516956 SDC1P18827 310 aa5.12□□□□□ -1.59
SCARNA16.4-201ENST00000516956 DDCP20711 480 aa5.12□□□□□ -1.59
SCARNA16.4-201ENST00000516956 MAOAP21397 527 aa5.12□□□□□ -1.59
SCARNA16.4-201ENST00000516956 ITGA3P26006 1051 aa5.12□□□□□ -1.59
SCARNA16.4-201ENST00000516956 FEN1P39748 380 aaKnown RBP5.12□□□□□ -1.59
SCARNA16.4-201ENST00000516956 GCGRP47871 477 aa5.12□□□□□ -1.59
SCARNA16.4-201ENST00000516956 PGDP52209 483 aa5.12□□□□□ -1.59
SCARNA16.4-201ENST00000516956 NCBP2P52298 156 aaKnown RBP eCLIP5.12□□□□□ -1.59
SCARNA16.4-201ENST00000516956 MANFP55145 182 aaKnown RBP5.12□□□□□ -1.59
SCARNA16.4-201ENST00000516956 HNRNPH2P55795 449 aaKnown RBP5.12□□□□□ -1.59
SCARNA16.4-201ENST00000516956 NME5P56597 212 aa5.12□□□□□ -1.59
SCARNA16.4-201ENST00000516956 CLDN8P56748 225 aa5.12□□□□□ -1.59
SCARNA16.4-201ENST00000516956 KCNK10P57789 538 aa5.12□□□□□ -1.59
SCARNA16.4-201ENST00000516956 CXADRP78310 365 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms