RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 SLC38A8A6NNN8 435 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 CD3EAPO15446 510 aaKnown RBP7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 GATBO75879 557 aaKnown RBP7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 PCDH8O95206 1070 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 GJB5O95377 273 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 OPN1MWP04001 364 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 OPN1MW2P0DN77 364 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 OPN1MW3P0DN78 364 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 SLC2A1P11166 492 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 CR2P20023 1033 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 AHCYP23526 432 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 GTF2E2P29084 291 aaKnown RBP7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 PSMD8P48556 350 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 GZMKP49863 264 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 XKP51811 444 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 ZNF140P52738 457 aaPredicted RBP7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 STC1P52823 247 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 CDH13P55290 713 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 AQP6Q13520 282 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 CLEC6AQ6EIG7 209 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 PRSS55Q6UWB4 352 aaPredicted RBP7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 LARP4Q71RC2 724 aaKnown RBP eCLIP7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 LILRA2Q8N149 483 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 MOSPD2Q8NHP6 518 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 RHOXF1Q8NHV9 184 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 BLOC1S5Q8TDH9 187 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 TMEM41AQ96HV5 264 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 SMIM14Q96QK8 99 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 TGIF2Q9GZN2 237 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 PCDHAC1Q9H158 963 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 KLHL31Q9H511 634 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 C12orf49Q9H741 205 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 WDR26Q9H7D7 661 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 KAT8Q9H7Z6 458 aaKnown RBP7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 MRPS30Q9NP92 439 aaKnown RBP7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 PLCXD1Q9NUJ7 323 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 ANKRD12Q6UB98 2062 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 ATP6AP2A0A1C7CYW4 349 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 MASP2O00187 686 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 PPP6CO00743 305 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 SMAD9O15198 467 aaKnown RBP7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 NRP2O60462 931 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 ATP6AP2O75787 350 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 RPP40O75818 363 aaKnown RBP7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 CD3GP09693 182 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 ALDOCP09972 364 aaKnown RBP7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 OR4E1P0C645 316 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 RRASP10301 218 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 VEGFCP49767 419 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 PRMT2P55345 433 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 NME5P56597 212 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 SP3Q02447 781 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 CAMK1Q14012 370 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 ZNHIT3Q15649 155 aaPredicted RBP7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 CATSPEREQ5SY80 951 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 C1orf94Q6P1W5 598 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 ADHFE1Q8IWW8 467 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 TMEM132CQ8N3T6 1108 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 CHDHQ8NE62 594 aaPredicted RBP7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 MDGA1Q8NFP4 955 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 DBF4BQ8NFT6 615 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 SGCZQ96LD1 299 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 ZNF599Q96NL3 588 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 OR1F2PQ96R84 312 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 ATOH8Q96SQ7 321 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 SPSB2Q99619 263 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 TREX2Q9BQ50 279 aaPredicted RBP7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 ANKRD19PQ9H560 264 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 COQ10BQ9H8M1 238 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 ABT1Q9ULW3 272 aaKnown RBP7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 ZFP37Q9Y6Q3 630 aaPredicted RBP7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 PLXNB3Q9ULL4 1909 aa7.15□□□□□ -1.26
PDLIM5-219ENST00000514743 LTBP2Q14767 1821 aa7.15□□□□□ -1.26
PDLIM5-219ENST00000514743 A0A1B0GTL3 188 aa7.15□□□□□ -1.26
PDLIM5-219ENST00000514743 FAM149AA5PLN7 773 aa7.15□□□□□ -1.26
PDLIM5-219ENST00000514743 LRRC14BA6NHZ5 514 aa7.15□□□□□ -1.26
PDLIM5-219ENST00000514743 C9JVG2 144 aa7.15□□□□□ -1.26
PDLIM5-219ENST00000514743 H0YIV9 168 aa7.15□□□□□ -1.26
PDLIM5-219ENST00000514743 CASC3O15234 703 aaKnown RBP7.15□□□□□ -1.26
PDLIM5-219ENST00000514743 NOBOXO60393 691 aa7.15□□□□□ -1.26
PDLIM5-219ENST00000514743 BCAS2O75934 225 aaPredicted RBP7.15□□□□□ -1.26
PDLIM5-219ENST00000514743 UBXN7O94888 489 aa7.15□□□□□ -1.26
PDLIM5-219ENST00000514743 RASAL1O95294 804 aa7.15□□□□□ -1.26
PDLIM5-219ENST00000514743 GLP2RO95838 553 aa7.15□□□□□ -1.26
PDLIM5-219ENST00000514743 F11P03951 625 aa7.15□□□□□ -1.26
PDLIM5-219ENST00000514743 GALTP07902 379 aa7.15□□□□□ -1.26
PDLIM5-219ENST00000514743 RAB3BP20337 219 aa7.15□□□□□ -1.26
PDLIM5-219ENST00000514743 SLC7A1P30825 629 aa7.15□□□□□ -1.26
PDLIM5-219ENST00000514743 FOXA1P55317 472 aa7.15□□□□□ -1.26
PDLIM5-219ENST00000514743 SH3BP2P78314 561 aa7.15□□□□□ -1.26
PDLIM5-219ENST00000514743 TNK1Q13470 666 aa7.15□□□□□ -1.26
PDLIM5-219ENST00000514743 RBMS2Q15434 407 aaKnown RBP7.15□□□□□ -1.26
PDLIM5-219ENST00000514743 COLEC12Q5KU26 742 aa7.15□□□□□ -1.26
PDLIM5-219ENST00000514743 CYP2R1Q6VVX0 501 aa7.15□□□□□ -1.26
PDLIM5-219ENST00000514743 RASSF6Q6ZTQ3 369 aa7.15□□□□□ -1.26
PDLIM5-219ENST00000514743 USP30Q70CQ3 517 aa7.15□□□□□ -1.26
PDLIM5-219ENST00000514743 FAM122BQ7Z309 247 aa7.15□□□□□ -1.26
PDLIM5-219ENST00000514743 TIPARPQ7Z3E1 657 aaKnown RBP7.15□□□□□ -1.26
PDLIM5-219ENST00000514743 GALNT10Q86SR1 603 aa7.15□□□□□ -1.26
PDLIM5-219ENST00000514743 RETREG3Q86VR2 466 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms