RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 TMEM156Q8N614 296 aa9.72□□□□□ -0.85
HMGXB3-205ENST00000514469 ZNF321PQ8N8H1 164 aa9.72□□□□□ -0.85
HMGXB3-205ENST00000514469 L3MBTL4Q8NA19 623 aa9.72□□□□□ -0.85
HMGXB3-205ENST00000514469 MNS1Q8NEH6 495 aa9.72□□□□□ -0.85
HMGXB3-205ENST00000514469 OR8K3Q8NH51 312 aa9.72□□□□□ -0.85
HMGXB3-205ENST00000514469 WDR20Q8TBZ3 569 aa9.72□□□□□ -0.85
HMGXB3-205ENST00000514469 SLC2A12Q8TD20 617 aa9.72□□□□□ -0.85
HMGXB3-205ENST00000514469 RGMAQ96B86 450 aa9.72□□□□□ -0.85
HMGXB3-205ENST00000514469 REPS1Q96D71 796 aa9.72□□□□□ -0.85
HMGXB3-205ENST00000514469 MTERF1Q99551 399 aaKnown RBP9.72□□□□□ -0.85
HMGXB3-205ENST00000514469 CENPKQ9BS16 269 aa9.72□□□□□ -0.85
HMGXB3-205ENST00000514469 VPS11Q9H270 941 aa9.72□□□□□ -0.85
HMGXB3-205ENST00000514469 ZNF358Q9NW07 568 aa9.72□□□□□ -0.85
HMGXB3-205ENST00000514469 MS4A12Q9NXJ0 267 aa9.72□□□□□ -0.85
HMGXB3-205ENST00000514469 CPSF2Q9P2I0 782 aaKnown RBP9.72□□□□□ -0.85
HMGXB3-205ENST00000514469 MYOTQ9UBF9 498 aa9.72□□□□□ -0.85
HMGXB3-205ENST00000514469 PHF11Q9UIL8 331 aa9.72□□□□□ -0.85
HMGXB3-205ENST00000514469 TINAGQ9UJW2 476 aa9.72□□□□□ -0.85
HMGXB3-205ENST00000514469 ZNF180Q9UJW8 692 aa9.72□□□□□ -0.85
HMGXB3-205ENST00000514469 ENTPD4Q9Y227 616 aa9.72□□□□□ -0.85
HMGXB3-205ENST00000514469 TNPO3Q9Y5L0 923 aaKnown RBP9.72□□□□□ -0.85
HMGXB3-205ENST00000514469 KLF2Q9Y5W3 355 aaPredicted RBP9.72□□□□□ -0.85
HMGXB3-205ENST00000514469 ITPR2Q14571 2701 aa9.72□□□□□ -0.85
HMGXB3-205ENST00000514469 A0A0A6YYD5 115 aa9.71□□□□□ -0.86
HMGXB3-205ENST00000514469 A8MVJ9 347 aa9.71□□□□□ -0.86
HMGXB3-205ENST00000514469 C17orf105B2RV13 164 aa9.71□□□□□ -0.86
HMGXB3-205ENST00000514469 KLRC4-KLRK1H3BQV0 150 aa9.71□□□□□ -0.86
HMGXB3-205ENST00000514469 STX16-NPEPL1H3BU86 382 aa9.71□□□□□ -0.86
HMGXB3-205ENST00000514469 OR7A17O14581 309 aa9.71□□□□□ -0.86
HMGXB3-205ENST00000514469 STX16O14662 325 aa9.71□□□□□ -0.86
HMGXB3-205ENST00000514469 PEX1O43933 1283 aa9.71□□□□□ -0.86
HMGXB3-205ENST00000514469 KRT38O76015 456 aa9.71□□□□□ -0.86
HMGXB3-205ENST00000514469 ETHE1O95571 254 aa9.71□□□□□ -0.86
HMGXB3-205ENST00000514469 CTAGE8P0CG41 777 aa9.71□□□□□ -0.86
HMGXB3-205ENST00000514469 PTGER1P34995 402 aa9.71□□□□□ -0.86
HMGXB3-205ENST00000514469 STT3AP46977 705 aa9.71□□□□□ -0.86
HMGXB3-205ENST00000514469 SERPINB9P50453 376 aa9.71□□□□□ -0.86
HMGXB3-205ENST00000514469 HK2P52789 917 aa9.71□□□□□ -0.86
HMGXB3-205ENST00000514469 HNRNPH2P55795 449 aaKnown RBP9.71□□□□□ -0.86
HMGXB3-205ENST00000514469 RPS13P62277 151 aaKnown RBP9.71□□□□□ -0.86
HMGXB3-205ENST00000514469 ADORA2A-AS1P86434 159 aa9.71□□□□□ -0.86
HMGXB3-205ENST00000514469 HSF1Q00613 529 aa9.71□□□□□ -0.86
HMGXB3-205ENST00000514469 ID2Q02363 134 aa9.71□□□□□ -0.86
HMGXB3-205ENST00000514469 SLAMF1Q13291 335 aa9.71□□□□□ -0.86
HMGXB3-205ENST00000514469 ART3Q13508 389 aa9.71□□□□□ -0.86
HMGXB3-205ENST00000514469 CUL3Q13618 768 aa9.71□□□□□ -0.86
HMGXB3-205ENST00000514469 TSNAXIP1Q2TAA8 658 aa9.71□□□□□ -0.86
HMGXB3-205ENST00000514469 MRM1Q6IN84 353 aaKnown RBP9.71□□□□□ -0.86
HMGXB3-205ENST00000514469 BNC2Q6ZN30 1099 aaPredicted RBP9.71□□□□□ -0.86
HMGXB3-205ENST00000514469 C16orf47Q6ZP98 133 aaPredicted RBP9.71□□□□□ -0.86
HMGXB3-205ENST00000514469 TAOK1Q7L7X3 1001 aa9.71□□□□□ -0.86
HMGXB3-205ENST00000514469 FGD2Q7Z6J4 655 aa9.71□□□□□ -0.86
HMGXB3-205ENST00000514469 TICAM1Q8IUC6 712 aa9.71□□□□□ -0.86
HMGXB3-205ENST00000514469 CTAGE4Q8IX94 777 aa9.71□□□□□ -0.86
HMGXB3-205ENST00000514469 PTGR2Q8N8N7 351 aaPredicted RBP9.71□□□□□ -0.86
HMGXB3-205ENST00000514469 ZFP62Q8NB50 900 aaPredicted RBP9.71□□□□□ -0.86
HMGXB3-205ENST00000514469 PSD4Q8NDX1 1056 aa9.71□□□□□ -0.86
HMGXB3-205ENST00000514469 C7orf57Q8NEG2 295 aa9.71□□□□□ -0.86
HMGXB3-205ENST00000514469 C16orf52Q8NHV5 167 aa9.71□□□□□ -0.86
HMGXB3-205ENST00000514469 DCAKDQ8WVC6 231 aa9.71□□□□□ -0.86
HMGXB3-205ENST00000514469 ASB15Q8WXK1 588 aa9.71□□□□□ -0.86
HMGXB3-205ENST00000514469 IFT81Q8WYA0 676 aa9.71□□□□□ -0.86
HMGXB3-205ENST00000514469 ZNF592Q92610 1267 aa9.71□□□□□ -0.86
HMGXB3-205ENST00000514469 RASL10BQ96S79 203 aa9.71□□□□□ -0.86
HMGXB3-205ENST00000514469 OR8D2Q9GZM6 311 aa9.71□□□□□ -0.86
HMGXB3-205ENST00000514469 IPPKQ9H8X2 491 aa9.71□□□□□ -0.86
HMGXB3-205ENST00000514469 LIN28AQ9H9Z2 209 aaKnown RBP9.71□□□□□ -0.86
HMGXB3-205ENST00000514469 PRM3Q9NNZ6 103 aa9.71□□□□□ -0.86
HMGXB3-205ENST00000514469 TIMMDC1Q9NPL8 285 aa9.71□□□□□ -0.86
HMGXB3-205ENST00000514469 DEPPQ9NTK1 212 aa9.71□□□□□ -0.86
HMGXB3-205ENST00000514469 HPF1Q9NWY4 346 aa9.71□□□□□ -0.86
HMGXB3-205ENST00000514469 PSD3Q9NYI0 1048 aa9.71□□□□□ -0.86
HMGXB3-205ENST00000514469 XPR1Q9UBH6 696 aa9.71□□□□□ -0.86
HMGXB3-205ENST00000514469 PCTPQ9UKL6 214 aa9.71□□□□□ -0.86
HMGXB3-205ENST00000514469 TMCO1Q9UM00 188 aa9.71□□□□□ -0.86
HMGXB3-205ENST00000514469 PPT2Q9UMR5 302 aa9.71□□□□□ -0.86
HMGXB3-205ENST00000514469 RNF11Q9Y3C5 154 aa9.71□□□□□ -0.86
HMGXB3-205ENST00000514469 CSMD1Q96PZ7 3565 aa9.71□□□□□ -0.86
HMGXB3-205ENST00000514469 FBN2P35556 2912 aa9.7□□□□□ -0.86
HMGXB3-205ENST00000514469 PRSS44E7EML9 344 aa9.7□□□□□ -0.86
HMGXB3-205ENST00000514469 WWP2O00308 870 aa9.7□□□□□ -0.86
HMGXB3-205ENST00000514469 FOXE1O00358 373 aaPredicted RBP9.7□□□□□ -0.86
HMGXB3-205ENST00000514469 TFECO14948 347 aaPredicted RBP9.7□□□□□ -0.86
HMGXB3-205ENST00000514469 EEDO75530 441 aaKnown RBP9.7□□□□□ -0.86
HMGXB3-205ENST00000514469 PRKRAO75569 313 aaKnown RBP9.7□□□□□ -0.86
HMGXB3-205ENST00000514469 OR6B1O95007 311 aa9.7□□□□□ -0.86
HMGXB3-205ENST00000514469 CLDN9O95484 217 aa9.7□□□□□ -0.86
HMGXB3-205ENST00000514469 TUBB4AP04350 444 aa9.7□□□□□ -0.86
HMGXB3-205ENST00000514469 IGKV3-11P04433 115 aa9.7□□□□□ -0.86
HMGXB3-205ENST00000514469 RBP1P09455 135 aa9.7□□□□□ -0.86
HMGXB3-205ENST00000514469 COL6A2P12110 1019 aa9.7□□□□□ -0.86
HMGXB3-205ENST00000514469 COX7A2P14406 83 aa9.7□□□□□ -0.86
HMGXB3-205ENST00000514469 ABOP16442 354 aa9.7□□□□□ -0.86
HMGXB3-205ENST00000514469 AGAP20933 346 aa9.7□□□□□ -0.86
HMGXB3-205ENST00000514469 PTX3P26022 381 aaPredicted RBP9.7□□□□□ -0.86
HMGXB3-205ENST00000514469 CNTFP26441 200 aa9.7□□□□□ -0.86
HMGXB3-205ENST00000514469 BSGP35613 385 aa9.7□□□□□ -0.86
HMGXB3-205ENST00000514469 RFC3P40938 356 aa9.7□□□□□ -0.86
HMGXB3-205ENST00000514469 BUD31P41223 144 aaPredicted RBP9.7□□□□□ -0.86
HMGXB3-205ENST00000514469 SOX3P41225 446 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms