RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 SOX17Q9H6I2 414 aaPredicted RBP7.86□□□□□ -1.15
CCL28-204ENST00000514421 NOL11Q9H8H0 719 aaKnown RBP7.86□□□□□ -1.15
CCL28-204ENST00000514421 ACTR8Q9H981 624 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 PRM3Q9NNZ6 103 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 SEMA3GQ9NS98 782 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 RIC8BQ9NVN3 520 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 AIG1Q9NVV5 245 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 ASIC5Q9NY37 505 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 STX18Q9P2W9 335 aaKnown RBP7.86□□□□□ -1.15
CCL28-204ENST00000514421 NKX1-2Q9UD57 310 aaPredicted RBP7.86□□□□□ -1.15
CCL28-204ENST00000514421 MAN2B2Q9Y2E5 1009 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 NAALAD2Q9Y3Q0 740 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 TSC22D4Q9Y3Q8 395 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 PCDHGA11Q9Y5H2 935 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 KCNMB2Q9Y691 235 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 MDC1Q14676 2089 aaKnown RBP7.86□□□□□ -1.15
CCL28-204ENST00000514421 CNTRLQ7Z7A1 2325 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 PIEZO2Q9H5I5 2752 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 ATRXP46100 2492 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 DYTNA2CJ06 578 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 H0YIV9 168 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 LSM1O15116 133 aaKnown RBP7.85□□□□□ -1.15
CCL28-204ENST00000514421 ATXN7O15265 892 aaPredicted RBP7.85□□□□□ -1.15
CCL28-204ENST00000514421 CHST10O43529 356 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 FKBP6O75344 327 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 CIB2O75838 187 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 KLHL18O94889 574 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 OR4F21O95013 312 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 BMP10O95393 424 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 PSMG1O95456 288 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 TBX6O95947 436 aaPredicted RBP7.85□□□□□ -1.15
CCL28-204ENST00000514421 NPPAP01160 153 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 HEXBP07686 556 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 ZNF888P0CJ79 500 aaPredicted RBP7.85□□□□□ -1.15
CCL28-204ENST00000514421 ACPPP15309 386 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 PRPH2P23942 346 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 PTX3P26022 381 aaPredicted RBP7.85□□□□□ -1.15
CCL28-204ENST00000514421 PIK3CBP42338 1070 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 ZFP36L2P47974 494 aaKnown RBP7.85□□□□□ -1.15
CCL28-204ENST00000514421 NUDT2P50583 147 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 RRADP55042 308 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 RAB8AP61006 207 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 SNRPNP63162 240 aaKnown RBP7.85□□□□□ -1.15
CCL28-204ENST00000514421 BTN3A2P78410 334 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 MXRA7P84157 204 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 MAT1AQ00266 395 aaKnown RBP7.85□□□□□ -1.15
CCL28-204ENST00000514421 EMX2Q04743 252 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 KLC1Q07866 573 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 TGM3Q08188 693 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 TBL3Q12788 808 aaKnown RBP7.85□□□□□ -1.15
CCL28-204ENST00000514421 CUL3Q13618 768 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 RCAN2Q14206 197 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 ZRSR2Q15696 482 aaKnown RBP7.85□□□□□ -1.15
CCL28-204ENST00000514421 SYT16Q17RD7 645 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 ADPRMQ3LIE5 342 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 DEFB134Q4QY38 66 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 PDCD4Q53EL6 469 aaKnown RBP7.85□□□□□ -1.15
CCL28-204ENST00000514421 SOWAHCQ53LP3 525 aaPredicted RBP7.85□□□□□ -1.15
CCL28-204ENST00000514421 CMPK2Q5EBM0 449 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 TOR1AIP1Q5JTV8 583 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 C6orf136Q5SQH8 315 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 SWT1Q5T5J6 900 aaKnown RBP7.85□□□□□ -1.15
CCL28-204ENST00000514421 DEPDC1Q5TB30 811 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 C6orf163Q5TEZ5 329 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 BLOC1S3Q6QNY0 202 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 RIPOR1Q6ZS17 1223 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 SHISA6Q6ZSJ9 500 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 Q6ZSR9 355 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 MED25Q71SY5 747 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 PRSS41Q7RTY9 318 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 VN1R5Q7Z5H4 357 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 MILR1Q7Z6M3 343 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 PDSS2Q86YH6 399 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 APLFQ8IW19 511 aaPredicted RBP7.85□□□□□ -1.15
CCL28-204ENST00000514421 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.85□□□□□ -1.15
CCL28-204ENST00000514421 PRSS58Q8IYP2 241 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 MIER2Q8N344 545 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 TMEM102Q8N9M5 508 aaPredicted RBP7.85□□□□□ -1.15
CCL28-204ENST00000514421 OR4F6Q8NGB9 312 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 OR2T11Q8NH01 316 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 GAL3ST3Q96A11 431 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 RCN3Q96D15 328 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 REPS1Q96D71 796 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 MS4A6EQ96DS6 147 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 CMTM7Q96FZ5 175 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 PPP1R36Q96LQ0 422 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 FER1L6-AS2Q96M78 137 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 SERPINI1Q99574 410 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 GPATCH1Q9BRR8 931 aaKnown RBP7.85□□□□□ -1.15
CCL28-204ENST00000514421 NPLQ9BXD5 320 aaPredicted RBP7.85□□□□□ -1.15
CCL28-204ENST00000514421 MRPL1Q9BYD6 325 aaKnown RBP7.85□□□□□ -1.15
CCL28-204ENST00000514421 REXO4Q9GZR2 422 aaKnown RBP7.85□□□□□ -1.15
CCL28-204ENST00000514421 ATP13A2Q9NQ11 1180 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 C14orf105Q9NVL8 296 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 P4HTMQ9NXG6 502 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 ZIM2Q9NZV7 527 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 CTSFQ9UBX1 484 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 C3orf18Q9UK00 162 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 POMPQ9Y244 141 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 RNF11Q9Y3C5 154 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms