RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-222	ENST00000514006	SEC24A	O95486	1093 aa		4.41	□□□□□ -1.7
CALCOCO2-222	ENST00000514006	EML2	O95834	649 aa		4.41	□□□□□ -1.7
CALCOCO2-222	ENST00000514006	T-ENOL	P0DO92	83 aa		4.41	□□□□□ -1.7
CALCOCO2-222	ENST00000514006	EPB41	P11171	864 aa	Known RBP	4.41	□□□□□ -1.7
CALCOCO2-222	ENST00000514006	PAICS	P22234	425 aa	Known RBP	4.41	□□□□□ -1.7
CALCOCO2-222	ENST00000514006	HNRNPA2B1	P22626	353 aa	Known RBP	4.41	□□□□□ -1.7
CALCOCO2-222	ENST00000514006	IL4R	P24394	825 aa		4.41	□□□□□ -1.7
CALCOCO2-222	ENST00000514006	TMOD1	P28289	359 aa		4.41	□□□□□ -1.7
CALCOCO2-222	ENST00000514006	OR3A2	P47893	321 aa		4.41	□□□□□ -1.7
CALCOCO2-222	ENST00000514006	BTG1	P62324	171 aa		4.41	□□□□□ -1.7
CALCOCO2-222	ENST00000514006	FUT7	Q11130	342 aa		4.41	□□□□□ -1.7
CALCOCO2-222	ENST00000514006	DRP2	Q13474	957 aa		4.41	□□□□□ -1.7
CALCOCO2-222	ENST00000514006	C3AR1	Q16581	482 aa		4.41	□□□□□ -1.7
CALCOCO2-222	ENST00000514006	FAM106A	Q4KMX7	169 aa		4.41	□□□□□ -1.7
CALCOCO2-222	ENST00000514006	SPSB3	Q6PJ21	355 aa		4.41	□□□□□ -1.7
CALCOCO2-222	ENST00000514006	C9orf139	Q6ZV77	190 aa		4.41	□□□□□ -1.7
CALCOCO2-222	ENST00000514006	TRPT1	Q86TN4	253 aa	Known RBP	4.41	□□□□□ -1.7
CALCOCO2-222	ENST00000514006	RBM23	Q86U06	439 aa	Known RBP	4.41	□□□□□ -1.7
CALCOCO2-222	ENST00000514006	CUZD1	Q86UP6	607 aa		4.41	□□□□□ -1.7
CALCOCO2-222	ENST00000514006	SLC22A16	Q86VW1	577 aa		4.41	□□□□□ -1.7
CALCOCO2-222	ENST00000514006	C17orf64	Q86WR6	236 aa		4.41	□□□□□ -1.7
CALCOCO2-222	ENST00000514006	UNC5CL	Q8IV45	518 aa		4.41	□□□□□ -1.7
CALCOCO2-222	ENST00000514006	CENPL	Q8N0S6	344 aa	Predicted RBP	4.41	□□□□□ -1.7
CALCOCO2-222	ENST00000514006	OR10T2	Q8NGX3	314 aa		4.41	□□□□□ -1.7
CALCOCO2-222	ENST00000514006	CHPT1	Q8WUD6	406 aa		4.41	□□□□□ -1.7
CALCOCO2-222	ENST00000514006	OMA1	Q96E52	524 aa		4.41	□□□□□ -1.7
CALCOCO2-222	ENST00000514006	MAGED4	Q96JG8	741 aa		4.41	□□□□□ -1.7
CALCOCO2-222	ENST00000514006	JPH2	Q9BR39	696 aa	Predicted RBP	4.41	□□□□□ -1.7
CALCOCO2-222	ENST00000514006	TDRD1	Q9BXT4	1180 aa	Known RBP	4.41	□□□□□ -1.7
CALCOCO2-222	ENST00000514006	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	4.41	□□□□□ -1.7
CALCOCO2-222	ENST00000514006	PLCL2	Q9UPR0	1127 aa		4.41	□□□□□ -1.7
CALCOCO2-222	ENST00000514006	CHMP2B	Q9UQN3	213 aa		4.41	□□□□□ -1.7
CALCOCO2-222	ENST00000514006	ZMYM6	O95789	1325 aa		4.41	□□□□□ -1.7
CALCOCO2-222	ENST00000514006	RNF123	Q5XPI4	1314 aa		4.41	□□□□□ -1.7
CALCOCO2-222	ENST00000514006	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		4.4	□□□□□ -1.71
CALCOCO2-222	ENST00000514006		A0A0U1RQV5	110 aa		4.4	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	TRIM49B	A6NDI0	452 aa		4.4	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	SMAD6	O43541	496 aa	Known RBP	4.4	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	CS	O75390	466 aa	Known RBP	4.4	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	CLPTM1	O96005	669 aa		4.4	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	CALCA	P01258	141 aa		4.4	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	CRYAA	P02489	173 aa		4.4	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	VTN	P04004	478 aa		4.4	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	LYN	P07948	512 aa		4.4	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	PLA2G2A	P14555	144 aa		4.4	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	GLRA1	P23415	457 aa		4.4	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	FEN1	P39748	380 aa	Known RBP	4.4	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	GBX2	P52951	348 aa	Predicted RBP	4.4	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	ZKSCAN8	Q15776	578 aa	Predicted RBP	4.4	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	USH1G	Q495M9	461 aa		4.4	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	GTDC1	Q4AE62	458 aa		4.4	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	ATAD3B	Q5T9A4	648 aa		4.4	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	ARHGAP17	Q68EM7	881 aa		4.4	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	SLC25A47	Q6Q0C1	308 aa		4.4	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	CWC27	Q6UX04	472 aa	Known RBP	4.4	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	GDPD4	Q6W3E5	623 aa		4.4	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	SH2D5	Q6ZV89	423 aa		4.4	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	CACUL1	Q86Y37	369 aa		4.4	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	PARP8	Q8N3A8	854 aa		4.4	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	FADS6	Q8N9I5	356 aa		4.4	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	ADAD2	Q8NCV1	583 aa	Known RBP	4.4	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	KLHDC9	Q8NEP7	349 aa		4.4	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	OR2T11	Q8NH01	316 aa		4.4	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	ZNRF4	Q8WWF5	429 aa		4.4	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	GIMAP5	Q96F15	307 aa		4.4	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	SENP5	Q96HI0	755 aa	Predicted RBP	4.4	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	PCED1B	Q96HM7	432 aa		4.4	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	THOC3	Q96J01	351 aa	Known RBP	4.4	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	DEFB118	Q96PH6	123 aa		4.4	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	ATP13A3	Q9H7F0	1226 aa		4.4	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	GDF3	Q9NR23	364 aa		4.4	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	MAN2C1	Q9NTJ4	1040 aa		4.4	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	ZFP57	Q9NU63	452 aa		4.4	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	MED17	Q9NVC6	651 aa		4.4	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	ZNF624	Q9P2J8	865 aa	Predicted RBP	4.4	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	LHX3	Q9UBR4	397 aa		4.4	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	ZNF490	Q9ULM2	529 aa	Predicted RBP	4.4	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	MYH15	Q9Y2K3	1946 aa		4.4	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	WDR81	Q562E7	1941 aa		4.39	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	FGD5	Q6ZNL6	1462 aa		4.39	□□□□□ -1.71
CALCOCO2-222	ENST00000514006		A0A0G2JLW4	131 aa		4.39	□□□□□ -1.71
CALCOCO2-222	ENST00000514006		A0A1B0GUL7	405 aa		4.39	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	hCG_38984	A0A1B0GV85	526 aa		4.39	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	SH3PXD2B	A1X283	911 aa		4.39	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	LMO7DN	F2Z398	122 aa		4.39	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	PDXK	O00764	312 aa		4.39	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	LRCH4	O75427	683 aa		4.39	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	TRMU	O75648	421 aa	Known RBP	4.39	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	CDC123	O75794	336 aa	Predicted RBP	4.39	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	MFN2	O95140	757 aa		4.39	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	PRAMEF12	O95522	483 aa		4.39	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	APBB3	O95704	486 aa		4.39	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	FGF19	O95750	216 aa		4.39	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	PAK4	O96013	591 aa	Predicted RBP	4.39	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	CA3	P07451	260 aa		4.39	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	UMOD	P07911	640 aa		4.39	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	FAM157C	P0CG43	387 aa		4.39	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	CDK4	P11802	303 aa		4.39	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	GP9	P14770	177 aa		4.39	□□□□□ -1.71
CALCOCO2-222	ENST00000514006	ADRA1A	P35348	466 aa		4.39	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms