RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 ZFAND1Q8TCF1 268 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 CAPNS2Q96L46 248 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 DOHHQ9BU89 302 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 SPATA9Q9BWV2 254 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 SPRTNQ9H040 489 aaPredicted RBP9.22□□□□□ -0.93
VCAN-210ENST00000513960 CDCP1Q9H5V8 836 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 ZNF334Q9HCZ1 680 aaPredicted RBP9.22□□□□□ -0.93
VCAN-210ENST00000513960 CREBZFQ9NS37 354 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 TRPS1Q9UHF7 1281 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 SLC23A1Q9UHI7 598 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 HCN4Q9Y3Q4 1203 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 PRRC2BQ5JSZ5 2229 aaKnown RBP9.22□□□□□ -0.93
VCAN-210ENST00000513960 MN1Q10571 1320 aaPredicted RBP9.22□□□□□ -0.93
VCAN-210ENST00000513960 B8ZZF3 427 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 GAPDHSO14556 408 aaPredicted RBP9.22□□□□□ -0.93
VCAN-210ENST00000513960 TLX2O43763 284 aaPredicted RBP9.22□□□□□ -0.93
VCAN-210ENST00000513960 PCDH7O60245 1069 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 NCR1O76036 304 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 OR56A5P0C7T3 313 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 RPS5P46782 204 aaKnown RBP9.22□□□□□ -0.93
VCAN-210ENST00000513960 LMAN2Q12907 356 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 SUZ12Q15022 739 aaKnown RBP9.22□□□□□ -0.93
VCAN-210ENST00000513960 DUSP7Q16829 419 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 ESCO2Q56NI9 601 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 BHLHB9Q6PI77 547 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 HMGN2P46Q86SG4 172 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 ADGRG2Q8IZP9 1017 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 GALNT11Q8NCW6 608 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 NLGN4YQ8NFZ3 816 aaPredicted RBP9.22□□□□□ -0.93
VCAN-210ENST00000513960 KLHL6Q8WZ60 621 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 AKAP1Q92667 903 aaKnown RBP eCLIP9.22□□□□□ -0.93
VCAN-210ENST00000513960 TMEM121BQ9BXQ6 578 aaPredicted RBP9.22□□□□□ -0.93
VCAN-210ENST00000513960 SRRQ9GZT4 340 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 RACGAP1Q9H0H5 632 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 EVA1BQ9NVM1 165 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 GLTPQ9NZD2 209 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 HECAQ9UBI9 543 aaPredicted RBP9.22□□□□□ -0.93
VCAN-210ENST00000513960 SEC14L4Q9UDX3 406 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 MGAT4AQ9UM21 535 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 NDRG2Q9UN36 371 aaKnown RBP9.22□□□□□ -0.93
VCAN-210ENST00000513960 KLK4Q9Y5K2 254 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 MRPS14O60783 128 aaKnown RBP9.22□□□□□ -0.93
VCAN-210ENST00000513960 GNRH1P01148 92 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 ANXA4P09525 319 aaPredicted RBP9.22□□□□□ -0.93
VCAN-210ENST00000513960 HLA-EP13747 358 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 POU3F3P20264 500 aaPredicted RBP9.22□□□□□ -0.93
VCAN-210ENST00000513960 AVPR1BP47901 424 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 ZNF81P51508 661 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 PSPHP78330 225 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 ZNF79Q15937 498 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 SSX1Q16384 188 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 SAXO2Q658L1 398 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 PLAG1Q6DJT9 500 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 TMEM150AQ86TG1 271 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 CBARPQ8N350 705 aaPredicted RBP9.22□□□□□ -0.93
VCAN-210ENST00000513960 DNAJC5GQ8N7S2 189 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 GBF1Q92538 1859 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 TM9SF2Q99805 663 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 NTMT1Q9BV86 223 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 TMED9Q9BVK6 235 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 BARHL1Q9BZE3 327 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 GABARAPL1Q9H0R8 117 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 SERHLQ9NQF3 203 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 ZDHHC3Q9NYG2 299 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 GSTK1Q9Y2Q3 226 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 NEUROG3Q9Y4Z2 214 aa9.22□□□□□ -0.93
VCAN-210ENST00000513960 TRBV5-4A0A0C4DH59 114 aa9.21□□□□□ -0.93
VCAN-210ENST00000513960 PKLRP30613 574 aa9.21□□□□□ -0.93
VCAN-210ENST00000513960 CSTF2P33240 577 aaKnown RBP eCLIP9.21□□□□□ -0.93
VCAN-210ENST00000513960 EVI2BP34910 448 aa9.21□□□□□ -0.93
VCAN-210ENST00000513960 CSNK1DP48730 415 aa9.21□□□□□ -0.93
VCAN-210ENST00000513960 GZMKP49863 264 aa9.21□□□□□ -0.93
VCAN-210ENST00000513960 SCARB2Q14108 478 aa9.21□□□□□ -0.93
VCAN-210ENST00000513960 LRRC73Q5JTD7 316 aa9.21□□□□□ -0.93
VCAN-210ENST00000513960 BCL2L15Q5TBC7 163 aa9.21□□□□□ -0.93
VCAN-210ENST00000513960 CNIH2Q6PI25 160 aa9.21□□□□□ -0.93
VCAN-210ENST00000513960 TPRG1Q6ZUI0 275 aa9.21□□□□□ -0.93
VCAN-210ENST00000513960 ZNF767PQ75MW2 155 aa9.21□□□□□ -0.93
VCAN-210ENST00000513960 MEX3DQ86XN8 651 aaKnown RBP9.21□□□□□ -0.93
VCAN-210ENST00000513960 PLCZ1Q86YW0 608 aa9.21□□□□□ -0.93
VCAN-210ENST00000513960 TCEAL8Q8IYN2 117 aa9.21□□□□□ -0.93
VCAN-210ENST00000513960 GPR26Q8NDV2 337 aa9.21□□□□□ -0.93
VCAN-210ENST00000513960 TRMT61AQ96FX7 289 aaKnown RBP9.21□□□□□ -0.93
VCAN-210ENST00000513960 KCTD7Q96MP8 289 aa9.21□□□□□ -0.93
VCAN-210ENST00000513960 TSSK6Q9BXA6 273 aa9.21□□□□□ -0.93
VCAN-210ENST00000513960 SLC32A1Q9H598 525 aa9.21□□□□□ -0.93
VCAN-210ENST00000513960 RDH14Q9HBH5 336 aa9.21□□□□□ -0.93
VCAN-210ENST00000513960 STUB1Q9UNE7 303 aa9.21□□□□□ -0.93
VCAN-210ENST00000513960 CFAP20Q9Y6A4 193 aaKnown RBP9.21□□□□□ -0.93
VCAN-210ENST00000513960 PCM1Q15154 2024 aa9.21□□□□□ -0.94
VCAN-210ENST00000513960 NPIPB15A6NHN6 443 aaPredicted RBP9.21□□□□□ -0.94
VCAN-210ENST00000513960 TEX46H3BTG2 121 aa9.21□□□□□ -0.94
VCAN-210ENST00000513960 LYRM1O43325 122 aa9.21□□□□□ -0.94
VCAN-210ENST00000513960 HPGDSO60760 199 aa9.21□□□□□ -0.94
VCAN-210ENST00000513960 MTX2O75431 263 aa9.21□□□□□ -0.94
VCAN-210ENST00000513960 CBSLP0DN79 551 aa9.21□□□□□ -0.94
VCAN-210ENST00000513960 NR2F6P10588 404 aa9.21□□□□□ -0.94
VCAN-210ENST00000513960 PRKACAP17612 351 aa9.21□□□□□ -0.94
VCAN-210ENST00000513960 EPORP19235 508 aa9.21□□□□□ -0.94
VCAN-210ENST00000513960 PRPS1L1P21108 318 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms