RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 DENND6AQ8IWF6 608 aa9.62□□□□□ -0.87
CLDND1-227ENST00000513452 PALM2Q8IXS6 379 aa9.62□□□□□ -0.87
CLDND1-227ENST00000513452 ZNF595Q8IYB9 648 aa9.62□□□□□ -0.87
CLDND1-227ENST00000513452 UBL4BQ8N7F7 174 aa9.62□□□□□ -0.87
CLDND1-227ENST00000513452 C9orf106Q8NAJ2 232 aa9.62□□□□□ -0.87
CLDND1-227ENST00000513452 MAPK1IP1LQ8NDC0 245 aa9.62□□□□□ -0.87
CLDND1-227ENST00000513452 TRPV3Q8NET8 790 aa9.62□□□□□ -0.87
CLDND1-227ENST00000513452 OR8K3Q8NH51 312 aa9.62□□□□□ -0.87
CLDND1-227ENST00000513452 OR14A16Q8NHC5 309 aa9.62□□□□□ -0.87
CLDND1-227ENST00000513452 SLC22A8Q8TCC7 542 aa9.62□□□□□ -0.87
CLDND1-227ENST00000513452 PAQR8Q8TEZ7 354 aa9.62□□□□□ -0.87
CLDND1-227ENST00000513452 SLC5A11Q8WWX8 675 aa9.62□□□□□ -0.87
CLDND1-227ENST00000513452 SPACA9Q96E40 222 aaPredicted RBP9.62□□□□□ -0.87
CLDND1-227ENST00000513452 PIK3IP1Q96FE7 263 aa9.62□□□□□ -0.87
CLDND1-227ENST00000513452 SMIM10Q96HG1 83 aa9.62□□□□□ -0.87
CLDND1-227ENST00000513452 FAR2Q96K12 515 aa9.62□□□□□ -0.87
CLDND1-227ENST00000513452 CSF3RQ99062 836 aa9.62□□□□□ -0.87
CLDND1-227ENST00000513452 PARVBQ9HBI1 364 aa9.62□□□□□ -0.87
CLDND1-227ENST00000513452 PROK2Q9HC23 129 aa9.62□□□□□ -0.87
CLDND1-227ENST00000513452 EIF2B3Q9NR50 452 aaKnown RBP9.62□□□□□ -0.87
CLDND1-227ENST00000513452 PAK5Q9P286 719 aa9.62□□□□□ -0.87
CLDND1-227ENST00000513452 NDRG3Q9UGV2 375 aa9.62□□□□□ -0.87
CLDND1-227ENST00000513452 SOX13Q9UN79 622 aa9.62□□□□□ -0.87
CLDND1-227ENST00000513452 MRPS33Q9Y291 106 aaKnown RBP9.62□□□□□ -0.87
CLDND1-227ENST00000513452 SYCE3A1L190 88 aa9.61□□□□□ -0.87
CLDND1-227ENST00000513452 GRID2IPA4D2P6 1211 aa9.61□□□□□ -0.87
CLDND1-227ENST00000513452 AKR1B15C9JRZ8 316 aaPredicted RBP9.61□□□□□ -0.87
CLDND1-227ENST00000513452 EIF3FO00303 357 aaPredicted RBP9.61□□□□□ -0.87
CLDND1-227ENST00000513452 CTIFO43310 598 aaKnown RBP9.61□□□□□ -0.87
CLDND1-227ENST00000513452 CBFA2T2O43439 604 aa9.61□□□□□ -0.87
CLDND1-227ENST00000513452 TRAPPC6AO75865 159 aa9.61□□□□□ -0.87
CLDND1-227ENST00000513452 SERPINA6P08185 405 aa9.61□□□□□ -0.87
CLDND1-227ENST00000513452 PAMP19021 973 aa9.61□□□□□ -0.87
CLDND1-227ENST00000513452 TNNI3P19429 210 aa9.61□□□□□ -0.87
CLDND1-227ENST00000513452 NR1H2P55055 460 aa9.61□□□□□ -0.87
CLDND1-227ENST00000513452 SP140Q13342 867 aa9.61□□□□□ -0.87
CLDND1-227ENST00000513452 TNK1Q13470 666 aa9.61□□□□□ -0.87
CLDND1-227ENST00000513452 MPEG1Q2M385 716 aa9.61□□□□□ -0.87
CLDND1-227ENST00000513452 PIGGQ5H8A4 983 aa9.61□□□□□ -0.87
CLDND1-227ENST00000513452 DCST1Q5T197 706 aa9.61□□□□□ -0.87
CLDND1-227ENST00000513452 VASNQ6EMK4 673 aa9.61□□□□□ -0.87
CLDND1-227ENST00000513452 PEX26Q7Z412 305 aa9.61□□□□□ -0.87
CLDND1-227ENST00000513452 TMPRSS11BQ86T26 416 aa9.61□□□□□ -0.87
CLDND1-227ENST00000513452 LRRC57Q8N9N7 239 aa9.61□□□□□ -0.87
CLDND1-227ENST00000513452 OR10G3Q8NGC4 313 aa9.61□□□□□ -0.87
CLDND1-227ENST00000513452 OR56A3Q8NH54 315 aa9.61□□□□□ -0.87
CLDND1-227ENST00000513452 GABPB2Q8TAK5 448 aaPredicted RBP9.61□□□□□ -0.87
CLDND1-227ENST00000513452 EEF1AKMT1Q8WVE0 214 aa9.61□□□□□ -0.87
CLDND1-227ENST00000513452 C1orf54Q8WWF1 131 aa9.61□□□□□ -0.87
CLDND1-227ENST00000513452 GAL3ST3Q96A11 431 aa9.61□□□□□ -0.87
CLDND1-227ENST00000513452 ZNF597Q96LX8 424 aa9.61□□□□□ -0.87
CLDND1-227ENST00000513452 PIGQQ9BRB3 760 aa9.61□□□□□ -0.87
CLDND1-227ENST00000513452 DOHHQ9BU89 302 aa9.61□□□□□ -0.87
CLDND1-227ENST00000513452 SFXN3Q9BWM7 321 aa9.61□□□□□ -0.87
CLDND1-227ENST00000513452 ALOXE3Q9BYJ1 711 aa9.61□□□□□ -0.87
CLDND1-227ENST00000513452 ARL15Q9NXU5 204 aa9.61□□□□□ -0.87
CLDND1-227ENST00000513452 COPS7AQ9UBW8 275 aa9.61□□□□□ -0.87
CLDND1-227ENST00000513452 ADGRE2Q9UHX3 823 aa9.61□□□□□ -0.87
CLDND1-227ENST00000513452 TRMT6Q9UJA5 497 aaKnown RBP9.61□□□□□ -0.87
CLDND1-227ENST00000513452 AMFRQ9UKV5 643 aa9.61□□□□□ -0.87
CLDND1-227ENST00000513452 SLC6A5Q9Y345 797 aa9.61□□□□□ -0.87
CLDND1-227ENST00000513452 CUBNO60494 3623 aa9.6□□□□□ -0.87
CLDND1-227ENST00000513452 SYNDIG1LA6NDD5 238 aa9.6□□□□□ -0.87
CLDND1-227ENST00000513452 PABPN1LA6NDY0 278 aaKnown RBP9.6□□□□□ -0.87
CLDND1-227ENST00000513452 AP3B1O00203 1094 aa9.6□□□□□ -0.87
CLDND1-227ENST00000513452 SNPHO15079 494 aa9.6□□□□□ -0.87
CLDND1-227ENST00000513452 ERI3O43414 337 aaKnown RBP9.6□□□□□ -0.87
CLDND1-227ENST00000513452 B3GALT2O43825 422 aa9.6□□□□□ -0.87
CLDND1-227ENST00000513452 ETHE1O95571 254 aa9.6□□□□□ -0.87
CLDND1-227ENST00000513452 HIST1H2AGP0C0S8 130 aaPredicted RBP9.6□□□□□ -0.87
CLDND1-227ENST00000513452 HIST1H2ADP20671 130 aa9.6□□□□□ -0.87
CLDND1-227ENST00000513452 CERS1P27544 350 aa9.6□□□□□ -0.87
CLDND1-227ENST00000513452 HNRNPH1P31943 449 aaKnown RBP9.6□□□□□ -0.87
CLDND1-227ENST00000513452 SLC1A2P43004 574 aa9.6□□□□□ -0.87
CLDND1-227ENST00000513452 RGS4P49798 205 aa9.6□□□□□ -0.87
CLDND1-227ENST00000513452 STXBP1P61764 594 aaKnown RBP9.6□□□□□ -0.87
CLDND1-227ENST00000513452 TBL3Q12788 808 aaKnown RBP9.6□□□□□ -0.87
CLDND1-227ENST00000513452 STX4Q12846 297 aa9.6□□□□□ -0.87
CLDND1-227ENST00000513452 THOC5Q13769 683 aaKnown RBP9.6□□□□□ -0.87
CLDND1-227ENST00000513452 RCAN2Q14206 197 aa9.6□□□□□ -0.87
CLDND1-227ENST00000513452 DUPD1Q68J44 220 aa9.6□□□□□ -0.87
CLDND1-227ENST00000513452 LRRC8EQ6NSJ5 796 aa9.6□□□□□ -0.87
CLDND1-227ENST00000513452 CASC4Q6P4E1 433 aa9.6□□□□□ -0.87
CLDND1-227ENST00000513452 LYPD8Q6UX82 237 aa9.6□□□□□ -0.87
CLDND1-227ENST00000513452 SYDE1Q6ZW31 735 aaPredicted RBP9.6□□□□□ -0.87
CLDND1-227ENST00000513452 C9orf40Q8IXQ3 194 aa9.6□□□□□ -0.87
CLDND1-227ENST00000513452 MYO1HQ8N1T3 1032 aa9.6□□□□□ -0.87
CLDND1-227ENST00000513452 ZNF441Q8N8Z8 693 aa9.6□□□□□ -0.87
CLDND1-227ENST00000513452 CCT6BQ92526 530 aa9.6□□□□□ -0.87
CLDND1-227ENST00000513452 NTNG2Q96CW9 530 aa9.6□□□□□ -0.87
CLDND1-227ENST00000513452 WDYHV1Q96HA8 205 aa9.6□□□□□ -0.87
CLDND1-227ENST00000513452 HIST1H2AHQ96KK5 128 aa9.6□□□□□ -0.87
CLDND1-227ENST00000513452 CALR3Q96L12 384 aaKnown RBP9.6□□□□□ -0.87
CLDND1-227ENST00000513452 HS3ST6Q96QI5 342 aa9.6□□□□□ -0.87
CLDND1-227ENST00000513452 HIST1H2AJQ99878 128 aa9.6□□□□□ -0.87
CLDND1-227ENST00000513452 AIF1LQ9BQI0 150 aa9.6□□□□□ -0.87
CLDND1-227ENST00000513452 H2AFJQ9BTM1 129 aa9.6□□□□□ -0.87
CLDND1-227ENST00000513452 NPLQ9BXD5 320 aaPredicted RBP9.6□□□□□ -0.87
CLDND1-227ENST00000513452 UGT2B28Q9BY64 529 aa9.6□□□□□ -0.87
CLDND1-227ENST00000513452 CALHM2Q9HA72 323 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms