RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 FUT10Q6P4F1 479 aa3.8□□□□□ -1.8
HTT-210ENST00000512909 NOTUMQ6P988 496 aa3.8□□□□□ -1.8
HTT-210ENST00000512909 SUSD1Q6UWL2 747 aa3.8□□□□□ -1.8
HTT-210ENST00000512909 ZNF771Q7L3S4 317 aaPredicted RBP3.8□□□□□ -1.8
HTT-210ENST00000512909 SLC16A9Q7RTY1 509 aa3.8□□□□□ -1.8
HTT-210ENST00000512909 ADGRD2Q7Z7M1 963 aa3.8□□□□□ -1.8
HTT-210ENST00000512909 HSCBQ8IWL3 235 aa3.8□□□□□ -1.8
HTT-210ENST00000512909 CNNM3Q8NE01 707 aa3.8□□□□□ -1.8
HTT-210ENST00000512909 SLC2A11Q9BYW1 496 aa3.8□□□□□ -1.8
HTT-210ENST00000512909 P2RY12Q9H244 342 aa3.8□□□□□ -1.8
HTT-210ENST00000512909 DHX33Q9H6R0 707 aaKnown RBP3.8□□□□□ -1.8
HTT-210ENST00000512909 CWH43Q9H720 699 aa3.8□□□□□ -1.8
HTT-210ENST00000512909 MINDY3Q9H8M7 445 aa3.8□□□□□ -1.8
HTT-210ENST00000512909 TXLNGQ9NUQ3 528 aa3.8□□□□□ -1.8
HTT-210ENST00000512909 RUVBL2Q9Y230 463 aaKnown RBP3.8□□□□□ -1.8
HTT-210ENST00000512909 PRG3Q9Y2Y8 225 aaPredicted RBP3.8□□□□□ -1.8
HTT-210ENST00000512909 MYH7BA7E2Y1 1941 aa3.8□□□□□ -1.8
HTT-210ENST00000512909 FRMPD3Q5JV73 1810 aa3.79□□□□□ -1.8
HTT-210ENST00000512909 A0A087WV48 116 aa3.79□□□□□ -1.8
HTT-210ENST00000512909 IGKV6-21A0A0C4DH24 114 aa3.79□□□□□ -1.8
HTT-210ENST00000512909 IGHV4-61A0A0C4DH41 118 aa3.79□□□□□ -1.8
HTT-210ENST00000512909 HHLA1C9JL84 531 aa3.79□□□□□ -1.8
HTT-210ENST00000512909 LAD1O00515 517 aa3.79□□□□□ -1.8
HTT-210ENST00000512909 SLC16A4O15374 487 aa3.79□□□□□ -1.8
HTT-210ENST00000512909 B4GALT5O43286 388 aa3.79□□□□□ -1.8
HTT-210ENST00000512909 RAD51DO75771 328 aa3.79□□□□□ -1.8
HTT-210ENST00000512909 DFFBO76075 338 aa3.79□□□□□ -1.8
HTT-210ENST00000512909 DDHD2O94830 711 aa3.79□□□□□ -1.8
HTT-210ENST00000512909 CLPTM1O96005 669 aa3.79□□□□□ -1.8
HTT-210ENST00000512909 TSHBP01222 138 aa3.79□□□□□ -1.8
HTT-210ENST00000512909 IGKV3-20P01619 116 aa3.79□□□□□ -1.8
HTT-210ENST00000512909 IGHV4-59P01825 116 aa3.79□□□□□ -1.8
HTT-210ENST00000512909 APOHP02749 345 aaPredicted RBP3.79□□□□□ -1.8
HTT-210ENST00000512909 IL9P15248 144 aa3.79□□□□□ -1.8
HTT-210ENST00000512909 ARF4P18085 180 aaPredicted RBP3.79□□□□□ -1.8
HTT-210ENST00000512909 NR1D1P20393 614 aa3.79□□□□□ -1.8
HTT-210ENST00000512909 U2AF2P26368 475 aaKnown RBP eCLIP3.79□□□□□ -1.8
HTT-210ENST00000512909 AXLP30530 894 aa3.79□□□□□ -1.8
HTT-210ENST00000512909 TLX1P31314 330 aaPredicted RBP3.79□□□□□ -1.8
HTT-210ENST00000512909 ARL2P36404 184 aa3.79□□□□□ -1.8
HTT-210ENST00000512909 DCTP40126 519 aa3.79□□□□□ -1.8
HTT-210ENST00000512909 NPBWR1P48145 328 aa3.79□□□□□ -1.8
HTT-210ENST00000512909 SLC11A1P49279 550 aa3.79□□□□□ -1.8
HTT-210ENST00000512909 NAGLUP54802 743 aa3.79□□□□□ -1.8
HTT-210ENST00000512909 PTENP60484 403 aa3.79□□□□□ -1.8
HTT-210ENST00000512909 CACNG1Q06432 222 aa3.79□□□□□ -1.8
HTT-210ENST00000512909 HYAL1Q12794 435 aa3.79□□□□□ -1.8
HTT-210ENST00000512909 HNRNPDQ14103 355 aaKnown RBP3.79□□□□□ -1.8
HTT-210ENST00000512909 SMC1AQ14683 1233 aaKnown RBP3.79□□□□□ -1.8
HTT-210ENST00000512909 STK38Q15208 465 aa3.79□□□□□ -1.8
HTT-210ENST00000512909 TAZQ16635 292 aa3.79□□□□□ -1.8
HTT-210ENST00000512909 SGSM1Q2NKQ1 1148 aa3.79□□□□□ -1.8
HTT-210ENST00000512909 CTU2Q2VPK5 515 aaKnown RBP3.79□□□□□ -1.8
HTT-210ENST00000512909 KLHL22Q53GT1 634 aa3.79□□□□□ -1.8
HTT-210ENST00000512909 LACTB2Q53H82 288 aaPredicted RBP3.79□□□□□ -1.8
HTT-210ENST00000512909 NHSL2Q5HYW2 709 aa3.79□□□□□ -1.8
HTT-210ENST00000512909 CLLU1OSQ5K130 101 aa3.79□□□□□ -1.8
HTT-210ENST00000512909 FFAR4Q5NUL3 377 aa3.79□□□□□ -1.8
HTT-210ENST00000512909 TTC27Q6P3X3 843 aa3.79□□□□□ -1.8
HTT-210ENST00000512909 FAM173BQ6P4H8 233 aa3.79□□□□□ -1.8
HTT-210ENST00000512909 FAM219AQ8IW50 185 aa3.79□□□□□ -1.8
HTT-210ENST00000512909 TUSC5Q8IXB3 177 aa3.79□□□□□ -1.8
HTT-210ENST00000512909 LRRC43Q8N309 656 aa3.79□□□□□ -1.8
HTT-210ENST00000512909 C4orf32Q8N8J7 132 aa3.79□□□□□ -1.8
HTT-210ENST00000512909 GDAP1Q8TB36 358 aa3.79□□□□□ -1.8
HTT-210ENST00000512909 DNASE2BQ8WZ79 361 aa3.79□□□□□ -1.8
HTT-210ENST00000512909 KIFAP3Q92845 792 aa3.79□□□□□ -1.8
HTT-210ENST00000512909 P2RX5Q93086 422 aa3.79□□□□□ -1.8
HTT-210ENST00000512909 NAF1Q96HR8 494 aaKnown RBP3.79□□□□□ -1.8
HTT-210ENST00000512909 ZNF396Q96N95 335 aaPredicted RBP3.79□□□□□ -1.8
HTT-210ENST00000512909 BTBD9Q96Q07 612 aa3.79□□□□□ -1.8
HTT-210ENST00000512909 NKX3-1Q99801 234 aaPredicted RBP3.79□□□□□ -1.8
HTT-210ENST00000512909 MRPL9Q9BYD2 267 aaKnown RBP3.79□□□□□ -1.8
HTT-210ENST00000512909 NT5C3AQ9H0P0 336 aa3.79□□□□□ -1.8
HTT-210ENST00000512909 SDCBP2Q9H190 292 aa3.79□□□□□ -1.8
HTT-210ENST00000512909 C2orf40Q9H1Z8 148 aa3.79□□□□□ -1.8
HTT-210ENST00000512909 RPF1Q9H9Y2 349 aaKnown RBP3.79□□□□□ -1.8
HTT-210ENST00000512909 SIX2Q9NPC8 291 aa3.79□□□□□ -1.8
HTT-210ENST00000512909 MRPL17Q9NRX2 175 aaKnown RBP3.79□□□□□ -1.8
HTT-210ENST00000512909 TBC1D13Q9NVG8 400 aa3.79□□□□□ -1.8
HTT-210ENST00000512909 BARX2Q9UMQ3 279 aaPredicted RBP3.79□□□□□ -1.8
HTT-210ENST00000512909 COLEC10Q9Y6Z7 277 aa3.79□□□□□ -1.8
HTT-210ENST00000512909 LRRC37A2A6NM11 1700 aa3.78□□□□□ -1.8
HTT-210ENST00000512909 SCN5AQ14524 2016 aa3.78□□□□□ -1.8
HTT-210ENST00000512909 LCTP09848 1927 aa3.78□□□□□ -1.8
HTT-210ENST00000512909 MYH6P13533 1939 aa3.78□□□□□ -1.8
HTT-210ENST00000512909 FEZF1A0PJY2 475 aa3.78□□□□□ -1.8
HTT-210ENST00000512909 ARL5CA6NH57 179 aa3.78□□□□□ -1.8
HTT-210ENST00000512909 CASTOR2A6NHX0 329 aa3.78□□□□□ -1.8
HTT-210ENST00000512909 HIDE1A8MVS5 230 aa3.78□□□□□ -1.8
HTT-210ENST00000512909 TMEM150CB9EJG8 249 aa3.78□□□□□ -1.8
HTT-210ENST00000512909 C5orf67F2Z3F1 127 aa3.78□□□□□ -1.8
HTT-210ENST00000512909 H0Y626 953 aa3.78□□□□□ -1.8
HTT-210ENST00000512909 LYPLA2O95372 231 aa3.78□□□□□ -1.8
HTT-210ENST00000512909 NGFP01138 241 aa3.78□□□□□ -1.8
HTT-210ENST00000512909 UMODP07911 640 aa3.78□□□□□ -1.8
HTT-210ENST00000512909 FAM58BPP0C7Q3 252 aa3.78□□□□□ -1.8
HTT-210ENST00000512909 IGHV4-31P0DP07 118 aa3.78□□□□□ -1.8
HTT-210ENST00000512909 SYT1P21579 422 aa3.78□□□□□ -1.8
HTT-210ENST00000512909 NAMPTP43490 491 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms