RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 TTC7AQ9ULT0 858 aaPredicted RBP5.06□□□□□ -1.6
GYPB-212ENST00000511198 SNX7Q9UNH6 387 aa5.06□□□□□ -1.6
GYPB-212ENST00000511198 SACSQ9NZJ4 4579 aa5.06□□□□□ -1.6
GYPB-212ENST00000511198 ABCA1O95477 2261 aa5.06□□□□□ -1.6
GYPB-212ENST00000511198 MYH11P35749 1972 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 DOCK10Q96BY6 2186 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 RPS10-NUDT3A0A1W2PQS6 291 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 MCIDASD6RGH6 385 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 K7ERQ8 282 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 O00370 1275 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 EPHB6O15197 1021 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 IRAK2O43187 625 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 BUB1O43683 1085 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 ACSL4O60488 711 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 ANKRD34CP0C6C1 535 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 CCNB1P14635 433 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 CD58P19256 250 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 MUTP22033 750 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 AK4P27144 223 aaPredicted RBP5.05□□□□□ -1.6
GYPB-212ENST00000511198 PLK1P53350 603 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 FKBP3Q00688 224 aaKnown RBP5.05□□□□□ -1.6
GYPB-212ENST00000511198 RBPJQ06330 500 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 PMPCAQ10713 525 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 STK4Q13043 487 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 DHX34Q14147 1143 aaKnown RBP5.05□□□□□ -1.6
GYPB-212ENST00000511198 GALNT3Q14435 633 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 WSCD2Q2TBF2 565 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 KRT71Q3SY84 523 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 ZCWPW2Q504Y3 356 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 ODF2Q5BJF6 829 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 CMPK2Q5EBM0 449 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 ERAP2Q6P179 960 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 PIGWQ7Z7B1 504 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 MEX3DQ86XN8 651 aaKnown RBP5.05□□□□□ -1.6
GYPB-212ENST00000511198 DOLPP1Q86YN1 238 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 C12orf29Q8N999 325 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 SLC38A9Q8NBW4 561 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 CLEC1AQ8NC01 280 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 HJURPQ8NCD3 748 aaPredicted RBP5.05□□□□□ -1.6
GYPB-212ENST00000511198 MAPK1IP1LQ8NDC0 245 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 CFAP61Q8NHU2 1237 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 AGAP11Q8TF27 550 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 STYXQ8WUJ0 223 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 UBLCP1Q8WVY7 318 aaPredicted RBP5.05□□□□□ -1.6
GYPB-212ENST00000511198 RSC1A1Q92681 617 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 MR1Q95460 341 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 CCDC127Q96BQ5 260 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 TMEM41AQ96HV5 264 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 MS4A14Q96JA4 679 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 TNIP3Q96KP6 325 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 RUNDC3BQ96NL0 473 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 PSMB7Q99436 277 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 NAP1L3Q99457 506 aaPredicted RBP5.05□□□□□ -1.6
GYPB-212ENST00000511198 FAM213AQ9BRX8 229 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 TMEM109Q9BVC6 243 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 TXLNGYQ9BZA5 131 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 MAGEH1Q9H213 219 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 ZNF304Q9HCX3 659 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 KCNJ16Q9NPI9 418 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 YAE1D1Q9NRH1 226 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 SMARCAL1Q9NZC9 954 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 COQ3Q9NZJ6 369 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 TAAR2Q9P1P5 351 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 CNTN6Q9UQ52 1028 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 DTX4Q9Y2E6 619 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 C15orf41Q9Y2V0 281 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 UTP11Q9Y3A2 253 aaKnown RBP5.05□□□□□ -1.6
GYPB-212ENST00000511198 HBS1LQ9Y450 684 aaKnown RBP5.05□□□□□ -1.6
GYPB-212ENST00000511198 DNAH1Q9P2D7 4330 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 UBR4Q5T4S7 5183 aa5.05□□□□□ -1.6
GYPB-212ENST00000511198 GAGE12JA6NER3 117 aa5.04□□□□□ -1.6
GYPB-212ENST00000511198 KLHL41O60662 606 aa5.04□□□□□ -1.6
GYPB-212ENST00000511198 FTCDO95954 541 aa5.04□□□□□ -1.6
GYPB-212ENST00000511198 AGTP01019 485 aa5.04□□□□□ -1.6
GYPB-212ENST00000511198 LCKP06239 509 aa5.04□□□□□ -1.6
GYPB-212ENST00000511198 RAB40ALP0C0E4 278 aa5.04□□□□□ -1.6
GYPB-212ENST00000511198 SRCP12931 536 aa5.04□□□□□ -1.6
GYPB-212ENST00000511198 PDGFRAP16234 1089 aa5.04□□□□□ -1.6
GYPB-212ENST00000511198 ATP5DP30049 168 aa5.04□□□□□ -1.6
GYPB-212ENST00000511198 OTX2P32243 289 aa5.04□□□□□ -1.6
GYPB-212ENST00000511198 PRKCIP41743 596 aa5.04□□□□□ -1.6
GYPB-212ENST00000511198 SKIV2L2P42285 1042 aaKnown RBP5.04□□□□□ -1.6
GYPB-212ENST00000511198 PPM1FP49593 454 aaPredicted RBP5.04□□□□□ -1.6
GYPB-212ENST00000511198 RASSF2P50749 326 aa5.04□□□□□ -1.6
GYPB-212ENST00000511198 CCNG1P51959 295 aa5.04□□□□□ -1.6
GYPB-212ENST00000511198 DRG2P55039 364 aaKnown RBP5.04□□□□□ -1.6
GYPB-212ENST00000511198 GFERP55789 205 aa5.04□□□□□ -1.6
GYPB-212ENST00000511198 MAGOHP61326 146 aaKnown RBP5.04□□□□□ -1.6
GYPB-212ENST00000511198 YWHAGP61981 247 aaKnown RBP eCLIP5.04□□□□□ -1.6
GYPB-212ENST00000511198 SULT2A1Q06520 285 aa5.04□□□□□ -1.6
GYPB-212ENST00000511198 KLHL30Q0D2K2 578 aa5.04□□□□□ -1.6
GYPB-212ENST00000511198 SF3A3Q12874 501 aaKnown RBP eCLIP5.04□□□□□ -1.6
GYPB-212ENST00000511198 BIRC2Q13490 618 aa5.04□□□□□ -1.6
GYPB-212ENST00000511198 CAPRIN1Q14444 709 aaKnown RBP5.04□□□□□ -1.6
GYPB-212ENST00000511198 NAA25Q14CX7 972 aa5.04□□□□□ -1.6
GYPB-212ENST00000511198 PPP1R7Q15435 360 aa5.04□□□□□ -1.6
GYPB-212ENST00000511198 BTBD16Q32M84 506 aa5.04□□□□□ -1.6
GYPB-212ENST00000511198 SLFN11Q7Z7L1 901 aa5.04□□□□□ -1.6
GYPB-212ENST00000511198 BRSK2Q8IWQ3 736 aa5.04□□□□□ -1.6
GYPB-212ENST00000511198 KLHL7Q8IXQ5 586 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms