RNA–Protein interactions for RNA: ENST00000510951.5

NR1I3-227, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 774 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-227ENST00000510951 CLHC1Q8NHS4 586 aa9.78□□□□□ -0.84
NR1I3-227ENST00000510951 PPP3R2Q96LZ3 170 aa9.78□□□□□ -0.84
NR1I3-227ENST00000510951 C7orf26Q96N11 449 aa9.78□□□□□ -0.84
NR1I3-227ENST00000510951 FAM117AQ9C073 453 aa9.78□□□□□ -0.84
NR1I3-227ENST00000510951 PRDM9Q9NQV7 894 aa9.78□□□□□ -0.84
NR1I3-227ENST00000510951 P4HTMQ9NXG6 502 aa9.78□□□□□ -0.84
NR1I3-227ENST00000510951 MS4A12Q9NXJ0 267 aa9.78□□□□□ -0.84
NR1I3-227ENST00000510951 C5AR2Q9P296 337 aa9.78□□□□□ -0.84
NR1I3-227ENST00000510951 FBXL4Q9UKA2 621 aa9.78□□□□□ -0.84
NR1I3-227ENST00000510951 POLHQ9Y253 713 aa9.78□□□□□ -0.84
NR1I3-227ENST00000510951 DLGAP4Q9Y2H0 992 aa9.78□□□□□ -0.84
NR1I3-227ENST00000510951 MMACHCQ9Y4U1 282 aa9.78□□□□□ -0.84
NR1I3-227ENST00000510951 ZFHX4Q86UP3 3567 aa9.78□□□□□ -0.84
NR1I3-227ENST00000510951 LOC400499M0QZD8 3231 aa9.77□□□□□ -0.84
NR1I3-227ENST00000510951 CACNA1BQ00975 2339 aa9.77□□□□□ -0.85
NR1I3-227ENST00000510951 GOLGA8QA0A0J9YX86 632 aa9.77□□□□□ -0.85
NR1I3-227ENST00000510951 GOLGA8OA6NCC3 632 aa9.77□□□□□ -0.85
NR1I3-227ENST00000510951 A8MUA0 341 aa9.77□□□□□ -0.85
NR1I3-227ENST00000510951 TCP11X1B4DZS4 312 aa9.77□□□□□ -0.85
NR1I3-227ENST00000510951 GOLGA8NF8WBI6 632 aa9.77□□□□□ -0.85
NR1I3-227ENST00000510951 PEX12O00623 359 aa9.77□□□□□ -0.85
NR1I3-227ENST00000510951 SDHDO14521 159 aa9.77□□□□□ -0.85
NR1I3-227ENST00000510951 HDAC3O15379 428 aa9.77□□□□□ -0.85
NR1I3-227ENST00000510951 PROM1O43490 865 aa9.77□□□□□ -0.85
NR1I3-227ENST00000510951 FGF17O60258 216 aa9.77□□□□□ -0.85
NR1I3-227ENST00000510951 SEC24DO94855 1032 aaPredicted RBP9.77□□□□□ -0.85
NR1I3-227ENST00000510951 IGHEP01854 428 aa9.77□□□□□ -0.85
NR1I3-227ENST00000510951 SDC1P18827 310 aa9.77□□□□□ -0.85
NR1I3-227ENST00000510951 TLX1P31314 330 aaPredicted RBP9.77□□□□□ -0.85
NR1I3-227ENST00000510951 OR4D2P58180 307 aa9.77□□□□□ -0.85
NR1I3-227ENST00000510951 FOLH1Q04609 750 aa9.77□□□□□ -0.85
NR1I3-227ENST00000510951 RFTN2Q52LD8 501 aaPredicted RBP9.77□□□□□ -0.85
NR1I3-227ENST00000510951 SFT2D3Q587I9 215 aa9.77□□□□□ -0.85
NR1I3-227ENST00000510951 OR52E8Q6IFG1 317 aa9.77□□□□□ -0.85
NR1I3-227ENST00000510951 NOXRED1Q6NXP6 359 aa9.77□□□□□ -0.85
NR1I3-227ENST00000510951 KIRREL2Q6UWL6 708 aa9.77□□□□□ -0.85
NR1I3-227ENST00000510951 MAVSQ7Z434 540 aa9.77□□□□□ -0.85
NR1I3-227ENST00000510951 WDR75Q8IWA0 830 aaKnown RBP9.77□□□□□ -0.85
NR1I3-227ENST00000510951 ZNF595Q8IYB9 648 aa9.77□□□□□ -0.85
NR1I3-227ENST00000510951 AMER2Q8N7J2 671 aa9.77□□□□□ -0.85
NR1I3-227ENST00000510951 FNDC5Q8NAU1 212 aa9.77□□□□□ -0.85
NR1I3-227ENST00000510951 OR11G2Q8NGC1 345 aa9.77□□□□□ -0.85
NR1I3-227ENST00000510951 PIWIL2Q8TC59 973 aaKnown RBP9.77□□□□□ -0.85
NR1I3-227ENST00000510951 C16orf78Q8WTQ4 265 aa9.77□□□□□ -0.85
NR1I3-227ENST00000510951 TM4SF18Q96CE8 201 aa9.77□□□□□ -0.85
NR1I3-227ENST00000510951 C11orf24Q96F05 449 aaPredicted RBP9.77□□□□□ -0.85
NR1I3-227ENST00000510951 THOC1Q96FV9 657 aaKnown RBP9.77□□□□□ -0.85
NR1I3-227ENST00000510951 RPF2Q9H7B2 306 aaKnown RBP9.77□□□□□ -0.85
NR1I3-227ENST00000510951 WDR41Q9HAD4 459 aa9.77□□□□□ -0.85
NR1I3-227ENST00000510951 MEAF6Q9HAF1 191 aa9.77□□□□□ -0.85
NR1I3-227ENST00000510951 ZNF160Q9HCG1 818 aa9.77□□□□□ -0.85
NR1I3-227ENST00000510951 PFDN4Q9NQP4 134 aa9.77□□□□□ -0.85
NR1I3-227ENST00000510951 PNO1Q9NRX1 252 aaKnown RBP9.77□□□□□ -0.85
NR1I3-227ENST00000510951 HEY2Q9UBP5 337 aa9.77□□□□□ -0.85
NR1I3-227ENST00000510951 C19orf25Q9UFG5 118 aaPredicted RBP9.77□□□□□ -0.85
NR1I3-227ENST00000510951 USH1CQ9Y6N9 552 aa9.77□□□□□ -0.85
NR1I3-227ENST00000510951 CACNA1GO43497 2377 aa9.77□□□□□ -0.85
NR1I3-227ENST00000510951 CPAMD8Q8IZJ3 1885 aa9.76□□□□□ -0.85
NR1I3-227ENST00000510951 ZZEF1O43149 2961 aa9.76□□□□□ -0.85
NR1I3-227ENST00000510951 IGKV3D-11A0A0A0MRZ8 115 aa9.76□□□□□ -0.85
NR1I3-227ENST00000510951 IGHV1-45A0A0A0MS14 117 aa9.76□□□□□ -0.85
NR1I3-227ENST00000510951 A0A1W2PS29 197 aa9.76□□□□□ -0.85
NR1I3-227ENST00000510951 TRPC5OSA6NMA1 111 aa9.76□□□□□ -0.85
NR1I3-227ENST00000510951 NPIPB8E9PQR5 432 aa9.76□□□□□ -0.85
NR1I3-227ENST00000510951 PGRMC2O15173 223 aa9.76□□□□□ -0.85
NR1I3-227ENST00000510951 GUCY1B2O75343 617 aa9.76□□□□□ -0.85
NR1I3-227ENST00000510951 DNAJB5O75953 348 aa9.76□□□□□ -0.85
NR1I3-227ENST00000510951 LRATO95237 230 aa9.76□□□□□ -0.85
NR1I3-227ENST00000510951 IFNA16P05015 189 aa9.76□□□□□ -0.85
NR1I3-227ENST00000510951 COX6A1P12074 109 aa9.76□□□□□ -0.85
NR1I3-227ENST00000510951 TACR1P25103 407 aa9.76□□□□□ -0.85
NR1I3-227ENST00000510951 EPHA3P29320 983 aa9.76□□□□□ -0.85
NR1I3-227ENST00000510951 HSD17B7P56937 341 aa9.76□□□□□ -0.85
NR1I3-227ENST00000510951 TRA2BP62995 288 aaKnown RBP9.76□□□□□ -0.85
NR1I3-227ENST00000510951 STX4Q12846 297 aa9.76□□□□□ -0.85
NR1I3-227ENST00000510951 KIAA0040Q15053 153 aa9.76□□□□□ -0.85
NR1I3-227ENST00000510951 SLC9B1Q4ZJI4 515 aa9.76□□□□□ -0.85
NR1I3-227ENST00000510951 CRTC2Q53ET0 693 aaPredicted RBP9.76□□□□□ -0.85
NR1I3-227ENST00000510951 C6orf136Q5SQH8 315 aa9.76□□□□□ -0.85
NR1I3-227ENST00000510951 NXNQ6DKJ4 435 aa9.76□□□□□ -0.85
NR1I3-227ENST00000510951 FAM180BQ6P0A1 224 aa9.76□□□□□ -0.85
NR1I3-227ENST00000510951 GALNT18Q6P9A2 607 aa9.76□□□□□ -0.85
NR1I3-227ENST00000510951 PAPD4Q6PIY7 484 aaKnown RBP9.76□□□□□ -0.85
NR1I3-227ENST00000510951 TMEM205Q6UW68 189 aa9.76□□□□□ -0.85
NR1I3-227ENST00000510951 RGS9BPQ6ZS82 235 aa9.76□□□□□ -0.85
NR1I3-227ENST00000510951 GPR155Q7Z3F1 870 aa9.76□□□□□ -0.85
NR1I3-227ENST00000510951 CPEB2Q7Z5Q1 589 aaKnown RBP9.76□□□□□ -0.85
NR1I3-227ENST00000510951 HOMEZQ8IX15 550 aa9.76□□□□□ -0.85
NR1I3-227ENST00000510951 TMEM132CQ8N3T6 1108 aa9.76□□□□□ -0.85
NR1I3-227ENST00000510951 LIX1Q8N485 282 aa9.76□□□□□ -0.85
NR1I3-227ENST00000510951 PLPP5Q8NEB5 264 aa9.76□□□□□ -0.85
NR1I3-227ENST00000510951 THAP4Q8WY91 577 aa9.76□□□□□ -0.85
NR1I3-227ENST00000510951 GFM2Q969S9 779 aaKnown RBP9.76□□□□□ -0.85
NR1I3-227ENST00000510951 ANKRD9Q96BM1 317 aaPredicted RBP9.76□□□□□ -0.85
NR1I3-227ENST00000510951 KLHL29Q96CT2 875 aa9.76□□□□□ -0.85
NR1I3-227ENST00000510951 FCRL1Q96LA6 429 aa9.76□□□□□ -0.85
NR1I3-227ENST00000510951 TSSK3Q96PN8 268 aa9.76□□□□□ -0.85
NR1I3-227ENST00000510951 CCT7Q99832 543 aa9.76□□□□□ -0.85
NR1I3-227ENST00000510951 FAIM2Q9BWQ8 316 aa9.76□□□□□ -0.85
NR1I3-227ENST00000510951 TRIM55Q9BYV6 548 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms