RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 AMZ2Q86W34 360 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 FIBCD1Q8N539 461 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 ACBD7Q8N6N7 88 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 SMPDL3AQ92484 453 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 SLC5A7Q9GZV3 580 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 RNF121Q9H920 327 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 SMPD4Q9NXE4 827 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 PRSS44E7EML9 344 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 UFM1P61960 85 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 KCTD18Q6PI47 426 aaPredicted RBP8.06□□□□□ -1.12
HTT-208ENST00000510626 CEACAM20Q6UY09 585 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 CEP68Q76N32 757 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 JAGN1Q8N5M9 183 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 SIDT2Q8NBJ9 832 aaKnown RBP8.06□□□□□ -1.12
HTT-208ENST00000510626 HMCESQ96FZ2 354 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 PTPN2P17706 415 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 ETV3P41162 512 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 PSPHP78330 225 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 KLF1Q13351 362 aaPredicted RBP8.06□□□□□ -1.12
HTT-208ENST00000510626 ZFAND4Q86XD8 727 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 ELMOD3Q96FG2 381 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 REEP4Q9H6H4 257 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 TIGARQ9NQ88 270 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 BPNT1O95861 308 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 TFP02787 698 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 IL1RNP18510 177 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 HSD11B1P28845 292 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 GPX6P59796 221 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 OGDHQ02218 1023 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 ECM1Q16610 540 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 ALG10BQ5I7T1 473 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 TMED4Q7Z7H5 227 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 C7orf61Q8IZ16 206 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 RNF128Q8TEB7 428 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 MTERF1Q99551 399 aaKnown RBP8.06□□□□□ -1.12
HTT-208ENST00000510626 ZMAT5Q9UDW3 170 aaKnown RBP8.06□□□□□ -1.12
HTT-208ENST00000510626 TRAV6A0A075B6T7 132 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 TISP43B9A030 160 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 SOCS5O75159 536 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 PTPRAP18433 802 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 DLX5P56178 289 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 LIPKQ5VXJ0 399 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 KIAA0319LQ8IZA0 1049 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 HCAR2Q8TDS4 363 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 MGLLQ99685 303 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 TIMM13Q9Y5L4 95 aaPredicted RBP8.06□□□□□ -1.12
HTT-208ENST00000510626 KIDINS220Q9ULH0 1771 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 CDK14O94921 469 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 TICAM1Q8IUC6 712 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 C12orf29Q8N999 325 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 ADAD1Q96M93 576 aaKnown RBP8.06□□□□□ -1.12
HTT-208ENST00000510626 PDZD7Q9H5P4 517 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 SDHAF3Q9NRP4 125 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 MED17Q9NVC6 651 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 SPTBN2O15020 2390 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 SUOXP51687 545 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 MLLT1Q03111 559 aaPredicted RBP8.06□□□□□ -1.12
HTT-208ENST00000510626 BAK1Q16611 211 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 TOR1AIP1Q5JTV8 583 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 MANEALQ5VSG8 457 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 TPGS2Q68CL5 300 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 TNFAIP8L2Q6P589 184 aaPredicted RBP8.06□□□□□ -1.12
HTT-208ENST00000510626 SH3BGRLO75368 114 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 SEC14L2O76054 403 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 CSF3P09919 207 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 PCGF2P35227 344 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 BLKP51451 505 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 CCDC71LQ8N9Z2 235 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 OR6Q1Q8NGQ2 317 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 LCN9Q8WX39 176 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 MAFFQ9ULX9 164 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 DHDHQ9UQ10 334 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 ALDOAP04075 364 aaKnown RBP8.06□□□□□ -1.12
HTT-208ENST00000510626 ALPPL2P10696 532 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 CXCR1P25024 350 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 ZNF157P51786 506 aaPredicted RBP8.06□□□□□ -1.12
HTT-208ENST00000510626 GPR143P51810 404 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 TBCEQ15813 527 aaPredicted RBP8.06□□□□□ -1.12
HTT-208ENST00000510626 C1orf127Q8N9H9 656 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 SH3YL1Q96HL8 342 aaPredicted RBP8.06□□□□□ -1.12
HTT-208ENST00000510626 BMFQ96LC9 184 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 TMEM74Q96NL1 305 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 TM6SF2Q9BZW4 377 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 ALPK2Q86TB3 2170 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 CNTNAP1P78357 1384 aa8.06□□□□□ -1.12
HTT-208ENST00000510626 RIMS1Q86UR5 1692 aaKnown RBP8.05□□□□□ -1.12
HTT-208ENST00000510626 ZNF726A6NNF4 738 aa8.05□□□□□ -1.12
HTT-208ENST00000510626 DHRS4L1P0CG22 281 aa8.05□□□□□ -1.12
HTT-208ENST00000510626 PMS2P3Q13401 168 aa8.05□□□□□ -1.12
HTT-208ENST00000510626 PDSS1Q5T2R2 415 aa8.05□□□□□ -1.12
HTT-208ENST00000510626 MFSD6LQ8IWD5 586 aa8.05□□□□□ -1.12
HTT-208ENST00000510626 HASPINQ8TF76 798 aa8.05□□□□□ -1.12
HTT-208ENST00000510626 CPQQ9Y646 472 aa8.05□□□□□ -1.12
HTT-208ENST00000510626 INHBEP58166 350 aa8.05□□□□□ -1.12
HTT-208ENST00000510626 MAXP61244 160 aa8.05□□□□□ -1.12
HTT-208ENST00000510626 IRF9Q00978 393 aa8.05□□□□□ -1.12
HTT-208ENST00000510626 KCNJ8Q15842 424 aa8.05□□□□□ -1.12
HTT-208ENST00000510626 TRAF4Q9BUZ4 470 aaPredicted RBP8.05□□□□□ -1.12
HTT-208ENST00000510626 EBF1Q9UH73 591 aa8.05□□□□□ -1.12
HTT-208ENST00000510626 PUM1Q14671 1186 aaKnown RBP eCLIP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms