RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 C8orf89P0DMQ9 161 aa14.24□□□□□ -0.13
USP38-202ENST00000510377 RGS8P57771 180 aaPredicted RBP14.24□□□□□ -0.13
USP38-202ENST00000510377 RAB8AP61006 207 aa14.24□□□□□ -0.13
USP38-202ENST00000510377 BNC1Q01954 994 aa14.24□□□□□ -0.13
USP38-202ENST00000510377 SLC5A12Q1EHB4 618 aa14.24□□□□□ -0.13
USP38-202ENST00000510377 FRMPD2BQ6IN97 320 aa14.24□□□□□ -0.13
USP38-202ENST00000510377 PAMR1Q6UXH9 720 aa14.24□□□□□ -0.13
USP38-202ENST00000510377 LILRA3Q8N6C8 439 aaPredicted RBP14.24□□□□□ -0.13
USP38-202ENST00000510377 C2orf15Q8WU43 125 aaKnown RBP14.24□□□□□ -0.13
USP38-202ENST00000510377 ISG20Q96AZ6 181 aaKnown RBP14.24□□□□□ -0.13
USP38-202ENST00000510377 EFCAB11Q9BUY7 163 aa14.24□□□□□ -0.13
USP38-202ENST00000510377 NDUFAF4Q9P032 175 aa14.24□□□□□ -0.13
USP38-202ENST00000510377 TAC3Q9UHF0 121 aa14.24□□□□□ -0.13
USP38-202ENST00000510377 BRWD3Q6RI45 1802 aa14.24□□□□□ -0.13
USP38-202ENST00000510377 SOCS5O75159 536 aa14.24□□□□□ -0.13
USP38-202ENST00000510377 TBPL1P62380 186 aa14.24□□□□□ -0.13
USP38-202ENST00000510377 GAB1Q13480 694 aa14.24□□□□□ -0.13
USP38-202ENST00000510377 TMIGD1Q6UXZ0 262 aa14.24□□□□□ -0.13
USP38-202ENST00000510377 TBC1D19Q8N5T2 526 aa14.24□□□□□ -0.13
USP38-202ENST00000510377 WDR48Q8TAF3 677 aa14.24□□□□□ -0.13
USP38-202ENST00000510377 TXNDC15Q96J42 360 aa14.24□□□□□ -0.13
USP38-202ENST00000510377 CTRCQ99895 268 aa14.24□□□□□ -0.13
USP38-202ENST00000510377 AIF1LQ9BQI0 150 aa14.24□□□□□ -0.13
USP38-202ENST00000510377 TTTY10Q9BZA0 68 aa14.24□□□□□ -0.13
USP38-202ENST00000510377 SPEF1Q9Y4P9 236 aa14.24□□□□□ -0.13
USP38-202ENST00000510377 CYP17A1P05093 508 aa14.23□□□□□ -0.13
USP38-202ENST00000510377 CR2P20023 1033 aa14.23□□□□□ -0.13
USP38-202ENST00000510377 MAP2K3P46734 347 aa14.23□□□□□ -0.13
USP38-202ENST00000510377 CCSMST1Q4G0I0 132 aa14.23□□□□□ -0.13
USP38-202ENST00000510377 ZDHHC20Q5W0Z9 365 aa14.23□□□□□ -0.13
USP38-202ENST00000510377 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.23□□□□□ -0.13
USP38-202ENST00000510377 OR10H4Q8NGA5 316 aa14.23□□□□□ -0.13
USP38-202ENST00000510377 NEIL2Q969S2 332 aa14.23□□□□□ -0.13
USP38-202ENST00000510377 RAD51AP1Q96B01 352 aa14.23□□□□□ -0.13
USP38-202ENST00000510377 NELL2Q99435 816 aa14.23□□□□□ -0.13
USP38-202ENST00000510377 SPATA5L1Q9BVQ7 753 aa14.23□□□□□ -0.13
USP38-202ENST00000510377 STOX2Q9P2F5 926 aaPredicted RBP14.23□□□□□ -0.13
USP38-202ENST00000510377 ZSCAN5BA6NJL1 495 aa14.23□□□□□ -0.13
USP38-202ENST00000510377 C12orf71A8MTZ7 269 aa14.23□□□□□ -0.13
USP38-202ENST00000510377 M0R3H8 397 aa14.23□□□□□ -0.13
USP38-202ENST00000510377 WBP4O75554 376 aaKnown RBP14.23□□□□□ -0.13
USP38-202ENST00000510377 CLEC2LP0C7M8 214 aa14.23□□□□□ -0.13
USP38-202ENST00000510377 OR12D1P0DN82 309 aa14.23□□□□□ -0.13
USP38-202ENST00000510377 CHMP24386 653 aa14.23□□□□□ -0.13
USP38-202ENST00000510377 SPINT3P49223 89 aa14.23□□□□□ -0.13
USP38-202ENST00000510377 RNF144AP50876 292 aaPredicted RBP14.23□□□□□ -0.13
USP38-202ENST00000510377 DCDC1P59894 354 aa14.23□□□□□ -0.13
USP38-202ENST00000510377 PLEKHS1Q5SXH7 462 aa14.23□□□□□ -0.13
USP38-202ENST00000510377 PPP2R2DQ66LE6 453 aa14.23□□□□□ -0.13
USP38-202ENST00000510377 TMCO2Q7Z6W1 182 aaPredicted RBP14.23□□□□□ -0.13
USP38-202ENST00000510377 TRPV1Q8NER1 839 aa14.23□□□□□ -0.13
USP38-202ENST00000510377 ATP6V1C2Q8NEY4 427 aa14.23□□□□□ -0.13
USP38-202ENST00000510377 USP7Q93009 1102 aa14.23□□□□□ -0.13
USP38-202ENST00000510377 CCDC32Q9BV29 185 aa14.23□□□□□ -0.13
USP38-202ENST00000510377 CDADC1Q9BWV3 514 aa14.23□□□□□ -0.13
USP38-202ENST00000510377 MRPL39Q9NYK5 338 aaKnown RBP14.23□□□□□ -0.13
USP38-202ENST00000510377 ZNF224Q9NZL3 707 aa14.23□□□□□ -0.13
USP38-202ENST00000510377 KCNK2O95069 426 aa14.23□□□□□ -0.13
USP38-202ENST00000510377 GASTP01350 101 aa14.23□□□□□ -0.13
USP38-202ENST00000510377 IGFBP1P08833 259 aaPredicted RBP14.23□□□□□ -0.13
USP38-202ENST00000510377 JUNDP17535 347 aa14.23□□□□□ -0.13
USP38-202ENST00000510377 PCGF2P35227 344 aa14.23□□□□□ -0.13
USP38-202ENST00000510377 LASP1Q14847 261 aaKnown RBP14.23□□□□□ -0.13
USP38-202ENST00000510377 KLHL22Q53GT1 634 aa14.23□□□□□ -0.13
USP38-202ENST00000510377 ARL9Q6T311 187 aa14.23□□□□□ -0.13
USP38-202ENST00000510377 PEX5LQ8IYB4 626 aa14.23□□□□□ -0.13
USP38-202ENST00000510377 ELMOD2Q8IZ81 293 aa14.23□□□□□ -0.13
USP38-202ENST00000510377 CHCHD4Q8N4Q1 142 aa14.23□□□□□ -0.13
USP38-202ENST00000510377 SCRN2Q96FV2 425 aa14.23□□□□□ -0.13
USP38-202ENST00000510377 TMEM19Q96HH6 336 aa14.23□□□□□ -0.13
USP38-202ENST00000510377 TM9SF2Q99805 663 aa14.23□□□□□ -0.13
USP38-202ENST00000510377 SLC52A3Q9NQ40 469 aa14.23□□□□□ -0.13
USP38-202ENST00000510377 MAN2B2Q9Y2E5 1009 aa14.23□□□□□ -0.13
USP38-202ENST00000510377 PGRMC2O15173 223 aa14.22□□□□□ -0.13
USP38-202ENST00000510377 GNRH1P01148 92 aa14.22□□□□□ -0.13
USP38-202ENST00000510377 CRISP3P54108 245 aa14.22□□□□□ -0.13
USP38-202ENST00000510377 ABATP80404 500 aa14.22□□□□□ -0.13
USP38-202ENST00000510377 PRKCDQ05655 676 aa14.22□□□□□ -0.13
USP38-202ENST00000510377 TMEM115Q12893 351 aaPredicted RBP14.22□□□□□ -0.13
USP38-202ENST00000510377 LRIF1Q5T3J3 769 aa14.22□□□□□ -0.13
USP38-202ENST00000510377 RTN4RL1Q86UN2 441 aaPredicted RBP14.22□□□□□ -0.13
USP38-202ENST00000510377 AMIGO1Q86WK6 493 aa14.22□□□□□ -0.13
USP38-202ENST00000510377 C10orf53Q8N6V4 93 aa14.22□□□□□ -0.13
USP38-202ENST00000510377 OR52N2Q8NGI0 321 aa14.22□□□□□ -0.13
USP38-202ENST00000510377 ASB11Q8WXH4 323 aa14.22□□□□□ -0.13
USP38-202ENST00000510377 FYTTD1Q96QD9 318 aaKnown RBP14.22□□□□□ -0.13
USP38-202ENST00000510377 PKMYT1Q99640 499 aa14.22□□□□□ -0.13
USP38-202ENST00000510377 RDH14Q9HBH5 336 aa14.22□□□□□ -0.13
USP38-202ENST00000510377 MCUBQ9NWR8 336 aa14.22□□□□□ -0.13
USP38-202ENST00000510377 STUB1Q9UNE7 303 aa14.22□□□□□ -0.13
USP38-202ENST00000510377 CD8B2A6NJW9 211 aa14.22□□□□□ -0.13
USP38-202ENST00000510377 OR2B3O76000 313 aa14.22□□□□□ -0.13
USP38-202ENST00000510377 CD8BP10966 210 aa14.22□□□□□ -0.13
USP38-202ENST00000510377 BMP7P18075 431 aa14.22□□□□□ -0.13
USP38-202ENST00000510377 RHCEP18577 417 aa14.22□□□□□ -0.13
USP38-202ENST00000510377 CDH11P55287 796 aa14.22□□□□□ -0.13
USP38-202ENST00000510377 FATE1Q969F0 183 aa14.22□□□□□ -0.13
USP38-202ENST00000510377 F2RL3Q96RI0 385 aa14.22□□□□□ -0.13
USP38-202ENST00000510377 CHIAQ9BZP6 476 aa14.22□□□□□ -0.13
USP38-202ENST00000510377 GRIP1Q9Y3R0 1128 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms