RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 MSH2P43246 934 aa4.72□□□□□ -1.65
NEK1-204ENST00000509912 ZNF41P51814 821 aaPredicted RBP4.72□□□□□ -1.65
NEK1-204ENST00000509912 CLDN6P56747 220 aa4.72□□□□□ -1.65
NEK1-204ENST00000509912 NTRK2Q16620 822 aa4.72□□□□□ -1.65
NEK1-204ENST00000509912 LYPLAL1Q5VWZ2 237 aa4.72□□□□□ -1.65
NEK1-204ENST00000509912 SYPL2Q5VXT5 272 aa4.72□□□□□ -1.65
NEK1-204ENST00000509912 ABRAXAS1Q6UWZ7 409 aa4.72□□□□□ -1.65
NEK1-204ENST00000509912 OTOAQ7RTW8 1153 aa4.72□□□□□ -1.65
NEK1-204ENST00000509912 STK40Q8N2I9 435 aa4.72□□□□□ -1.65
NEK1-204ENST00000509912 SLC25A45Q8N413 288 aa4.72□□□□□ -1.65
NEK1-204ENST00000509912 ZNF843Q8N446 348 aa4.72□□□□□ -1.65
NEK1-204ENST00000509912 LILRB1Q8NHL6 650 aaPredicted RBP4.72□□□□□ -1.65
NEK1-204ENST00000509912 RANBP9Q96S59 729 aa4.72□□□□□ -1.65
NEK1-204ENST00000509912 CCM2Q9BSQ5 444 aa4.72□□□□□ -1.65
NEK1-204ENST00000509912 GATA5Q9BWX5 397 aaPredicted RBP4.72□□□□□ -1.65
NEK1-204ENST00000509912 POLDIP3Q9BY77 421 aaKnown RBP4.72□□□□□ -1.65
NEK1-204ENST00000509912 CARD9Q9H257 536 aa4.72□□□□□ -1.65
NEK1-204ENST00000509912 DYRK4Q9NR20 520 aa4.72□□□□□ -1.65
NEK1-204ENST00000509912 SERTAD4Q9NUC0 356 aa4.72□□□□□ -1.65
NEK1-204ENST00000509912 PIGVQ9NUD9 493 aa4.72□□□□□ -1.65
NEK1-204ENST00000509912 CMAHPQ9Y471 501 aa4.72□□□□□ -1.65
NEK1-204ENST00000509912 ANKRD11Q6UB99 2663 aaPredicted RBP4.72□□□□□ -1.65
NEK1-204ENST00000509912 LOC102723996A0A087X1L8 192 aa4.72□□□□□ -1.65
NEK1-204ENST00000509912 KRTAP23-1A1A580 65 aa4.72□□□□□ -1.65
NEK1-204ENST00000509912 J3QKU1 62 aa4.72□□□□□ -1.65
NEK1-204ENST00000509912 MATN3O15232 486 aa4.72□□□□□ -1.65
NEK1-204ENST00000509912 AQP9O43315 295 aa4.72□□□□□ -1.65
NEK1-204ENST00000509912 TM7SF2O76062 418 aa4.72□□□□□ -1.65
NEK1-204ENST00000509912 AP2A2O94973 939 aa4.72□□□□□ -1.65
NEK1-204ENST00000509912 SERPING1P05155 500 aa4.72□□□□□ -1.65
NEK1-204ENST00000509912 CTSLP07711 333 aa4.72□□□□□ -1.65
NEK1-204ENST00000509912 KRT7P08729 469 aa4.72□□□□□ -1.65
NEK1-204ENST00000509912 STC1P52823 247 aa4.72□□□□□ -1.65
NEK1-204ENST00000509912 CNTN1Q12860 1018 aa4.72□□□□□ -1.65
NEK1-204ENST00000509912 EIF2S3LQ2VIR3 472 aaKnown RBP4.72□□□□□ -1.65
NEK1-204ENST00000509912 TAF1BQ53T94 588 aaPredicted RBP4.72□□□□□ -1.65
NEK1-204ENST00000509912 SPECC1LQ69YQ0 1117 aa4.72□□□□□ -1.65
NEK1-204ENST00000509912 UNC5DQ6UXZ4 953 aa4.72□□□□□ -1.65
NEK1-204ENST00000509912 ZNF517Q6ZMY9 492 aaPredicted RBP4.72□□□□□ -1.65
NEK1-204ENST00000509912 Q6ZNX1 250 aa4.72□□□□□ -1.65
NEK1-204ENST00000509912 SLC29A4Q7RTT9 530 aa4.72□□□□□ -1.65
NEK1-204ENST00000509912 MMP21Q8N119 569 aa4.72□□□□□ -1.65
NEK1-204ENST00000509912 ARL14Q8N4G2 192 aa4.72□□□□□ -1.65
NEK1-204ENST00000509912 HORMAD2Q8N7B1 307 aa4.72□□□□□ -1.65
NEK1-204ENST00000509912 ZNF548Q8NEK5 533 aaPredicted RBP4.72□□□□□ -1.65
NEK1-204ENST00000509912 CFAP61Q8NHU2 1237 aa4.72□□□□□ -1.65
NEK1-204ENST00000509912 HUS1BQ8NHY5 278 aa4.72□□□□□ -1.65
NEK1-204ENST00000509912 RP9Q8TA86 221 aaKnown RBP4.72□□□□□ -1.65
NEK1-204ENST00000509912 UBA3Q8TBC4 463 aa4.72□□□□□ -1.65
NEK1-204ENST00000509912 PROKR1Q8TCW9 393 aa4.72□□□□□ -1.65
NEK1-204ENST00000509912 FAR1Q8WVX9 515 aa4.72□□□□□ -1.65
NEK1-204ENST00000509912 ZNF845Q96IR2 970 aaPredicted RBP4.72□□□□□ -1.65
NEK1-204ENST00000509912 CSPG4P5Q96PW8 444 aa4.72□□□□□ -1.65
NEK1-204ENST00000509912 LGMNQ99538 433 aa4.72□□□□□ -1.65
NEK1-204ENST00000509912 EBF2Q9HAK2 575 aa4.72□□□□□ -1.65
NEK1-204ENST00000509912 ASB6Q9NWX5 421 aa4.72□□□□□ -1.65
NEK1-204ENST00000509912 DCAF16Q9NXF7 216 aa4.72□□□□□ -1.65
NEK1-204ENST00000509912 A0A0B4J203 849 aa4.71□□□□□ -1.65
NEK1-204ENST00000509912 PRPSAP2O60256 369 aa4.71□□□□□ -1.65
NEK1-204ENST00000509912 UGDHO60701 494 aa4.71□□□□□ -1.65
NEK1-204ENST00000509912 RAMP2O60895 175 aa4.71□□□□□ -1.65
NEK1-204ENST00000509912 SOX2P48431 317 aa4.71□□□□□ -1.65
NEK1-204ENST00000509912 RGS7P49802 495 aa4.71□□□□□ -1.65
NEK1-204ENST00000509912 SULT1E1P49888 294 aa4.71□□□□□ -1.65
NEK1-204ENST00000509912 SLC12A2P55011 1212 aa4.71□□□□□ -1.65
NEK1-204ENST00000509912 ADORA2A-AS1P86434 159 aa4.71□□□□□ -1.65
NEK1-204ENST00000509912 KRT31Q15323 416 aa4.71□□□□□ -1.65
NEK1-204ENST00000509912 ZNF658BQ4V348 819 aaPredicted RBP4.71□□□□□ -1.65
NEK1-204ENST00000509912 C14orf28Q4W4Y0 310 aa4.71□□□□□ -1.65
NEK1-204ENST00000509912 FIP1L1Q6UN15 594 aaKnown RBP4.71□□□□□ -1.65
NEK1-204ENST00000509912 LCNL1Q6ZST4 164 aa4.71□□□□□ -1.65
NEK1-204ENST00000509912 ARHGAP22Q7Z5H3 698 aa4.71□□□□□ -1.65
NEK1-204ENST00000509912 CAMKMTQ7Z624 323 aa4.71□□□□□ -1.65
NEK1-204ENST00000509912 SDCCAG8Q86SQ7 713 aaPredicted RBP4.71□□□□□ -1.65
NEK1-204ENST00000509912 APCDD1Q8J025 514 aa4.71□□□□□ -1.65
NEK1-204ENST00000509912 SFRP1Q8N474 314 aa4.71□□□□□ -1.65
NEK1-204ENST00000509912 TRAM1L1Q8N609 369 aa4.71□□□□□ -1.65
NEK1-204ENST00000509912 FAM81AQ8TBF8 368 aa4.71□□□□□ -1.65
NEK1-204ENST00000509912 DTD2Q96FN9 168 aa4.71□□□□□ -1.65
NEK1-204ENST00000509912 C17orf62Q9BQA9 187 aa4.71□□□□□ -1.65
NEK1-204ENST00000509912 APOOQ9BUR5 198 aa4.71□□□□□ -1.65
NEK1-204ENST00000509912 TEX12Q9BXU0 123 aa4.71□□□□□ -1.65
NEK1-204ENST00000509912 DDIT4Q9NX09 232 aa4.71□□□□□ -1.65
NEK1-204ENST00000509912 CISD1Q9NZ45 108 aaKnown RBP4.71□□□□□ -1.65
NEK1-204ENST00000509912 ANAPC2Q9UJX6 822 aa4.71□□□□□ -1.65
NEK1-204ENST00000509912 UTS2RQ9UKP6 389 aa4.71□□□□□ -1.65
NEK1-204ENST00000509912 DTX4Q9Y2E6 619 aa4.71□□□□□ -1.65
NEK1-204ENST00000509912 GAGE12BA1L429 117 aa4.71□□□□□ -1.66
NEK1-204ENST00000509912 GAGE12HA6NDE8 117 aa4.71□□□□□ -1.66
NEK1-204ENST00000509912 GLOD5A6NK44 160 aa4.71□□□□□ -1.66
NEK1-204ENST00000509912 A8MXE2 369 aa4.71□□□□□ -1.66
NEK1-204ENST00000509912 K7ESM1 405 aa4.71□□□□□ -1.66
NEK1-204ENST00000509912 IL1BP01584 269 aa4.71□□□□□ -1.66
NEK1-204ENST00000509912 HEXAP06865 529 aa4.71□□□□□ -1.66
NEK1-204ENST00000509912 HNRNPCP07910 306 aaKnown RBP eCLIP4.71□□□□□ -1.664e-6■□□□□ 8.4
NEK1-204ENST00000509912 RPSAP08865 295 aaKnown RBP4.71□□□□□ -1.66
NEK1-204ENST00000509912 KRT3P12035 628 aa4.71□□□□□ -1.66
NEK1-204ENST00000509912 ETFAP13804 333 aa4.71□□□□□ -1.66
NEK1-204ENST00000509912 GM2AP17900 193 aa4.71□□□□□ -1.66
NEK1-204ENST00000509912 AGAP20933 346 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms