RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 GBAP04062 536 aa8.2□□□□□ -1.1
PDLIM5-213ENST00000509357 RNH1P13489 461 aaKnown RBP8.2□□□□□ -1.1
PDLIM5-213ENST00000509357 GSTM2P28161 218 aa8.2□□□□□ -1.1
PDLIM5-213ENST00000509357 PLA2G16P53816 162 aa8.2□□□□□ -1.1
PDLIM5-213ENST00000509357 HNRNPH2P55795 449 aaKnown RBP8.2□□□□□ -1.1
PDLIM5-213ENST00000509357 TAS2R50P59544 299 aa8.2□□□□□ -1.1
PDLIM5-213ENST00000509357 HMGCS1Q01581 520 aa8.2□□□□□ -1.1
PDLIM5-213ENST00000509357 TGM3Q08188 693 aa8.2□□□□□ -1.1
PDLIM5-213ENST00000509357 BST1Q10588 318 aa8.2□□□□□ -1.1
PDLIM5-213ENST00000509357 MRPL49Q13405 166 aaKnown RBP8.2□□□□□ -1.1
PDLIM5-213ENST00000509357 LAPTM5Q13571 262 aa8.2□□□□□ -1.1
PDLIM5-213ENST00000509357 RCN2Q14257 317 aa8.2□□□□□ -1.1
PDLIM5-213ENST00000509357 EXT1Q16394 746 aa8.2□□□□□ -1.1
PDLIM5-213ENST00000509357 SGO1Q5FBB7 561 aa8.2□□□□□ -1.1
PDLIM5-213ENST00000509357 DEPDC1Q5TB30 811 aa8.2□□□□□ -1.1
PDLIM5-213ENST00000509357 KHDRBS2Q5VWX1 349 aaKnown RBP8.2□□□□□ -1.1
PDLIM5-213ENST00000509357 KANK2Q63ZY3 851 aa8.2□□□□□ -1.1
PDLIM5-213ENST00000509357 FRG2Q64ET8 278 aa8.2□□□□□ -1.1
PDLIM5-213ENST00000509357 PLAG1Q6DJT9 500 aa8.2□□□□□ -1.1
PDLIM5-213ENST00000509357 MRM1Q6IN84 353 aaKnown RBP8.2□□□□□ -1.1
PDLIM5-213ENST00000509357 PAPD4Q6PIY7 484 aaKnown RBP8.2□□□□□ -1.1
PDLIM5-213ENST00000509357 IGFL2Q6UWQ7 119 aa8.2□□□□□ -1.1
PDLIM5-213ENST00000509357 Q6ZSR9 355 aa8.2□□□□□ -1.1
PDLIM5-213ENST00000509357 MAVSQ7Z434 540 aa8.2□□□□□ -1.1
PDLIM5-213ENST00000509357 ZNF781Q8N8C0 355 aa8.2□□□□□ -1.1
PDLIM5-213ENST00000509357 PLPP5Q8NEB5 264 aa8.2□□□□□ -1.1
PDLIM5-213ENST00000509357 OR2L5Q8NG80 312 aa8.2□□□□□ -1.1
PDLIM5-213ENST00000509357 TSLPQ969D9 159 aa8.2□□□□□ -1.1
PDLIM5-213ENST00000509357 GAL3ST3Q96A11 431 aa8.2□□□□□ -1.1
PDLIM5-213ENST00000509357 APIPQ96GX9 242 aa8.2□□□□□ -1.1
PDLIM5-213ENST00000509357 IMMP1LQ96LU5 166 aa8.2□□□□□ -1.1
PDLIM5-213ENST00000509357 FRG2BQ96QU4 278 aa8.2□□□□□ -1.1
PDLIM5-213ENST00000509357 MAPKAP1Q9BPZ7 522 aa8.2□□□□□ -1.1
PDLIM5-213ENST00000509357 MRPL1Q9BYD6 325 aaKnown RBP8.2□□□□□ -1.1
PDLIM5-213ENST00000509357 PITHD1Q9GZP4 211 aaPredicted RBP8.2□□□□□ -1.1
PDLIM5-213ENST00000509357 REXO4Q9GZR2 422 aaKnown RBP8.2□□□□□ -1.1
PDLIM5-213ENST00000509357 CLK4Q9HAZ1 481 aaKnown RBP8.2□□□□□ -1.1
PDLIM5-213ENST00000509357 ARGLU1Q9NWB6 273 aaPredicted RBP8.2□□□□□ -1.1
PDLIM5-213ENST00000509357 DNAJC15Q9Y5T4 150 aa8.2□□□□□ -1.1
PDLIM5-213ENST00000509357 PRRC2CQ9Y520 2896 aaKnown RBP8.2□□□□□ -1.1
PDLIM5-213ENST00000509357 CPAMD8Q8IZJ3 1885 aa8.19□□□□□ -1.1
PDLIM5-213ENST00000509357 A0A0A6YYD5 115 aa8.19□□□□□ -1.1
PDLIM5-213ENST00000509357 MYOCOSA0A1B0GUC4 107 aa8.19□□□□□ -1.1
PDLIM5-213ENST00000509357 A0A1W2PQ72 361 aa8.19□□□□□ -1.1
PDLIM5-213ENST00000509357 A8MUA0 341 aa8.19□□□□□ -1.1
PDLIM5-213ENST00000509357 FOXE1O00358 373 aaPredicted RBP8.19□□□□□ -1.1
PDLIM5-213ENST00000509357 CYR61O00622 381 aa8.19□□□□□ -1.1
PDLIM5-213ENST00000509357 CLDN4O14493 209 aa8.19□□□□□ -1.1
PDLIM5-213ENST00000509357 SNNO75324 88 aaPredicted RBP8.19□□□□□ -1.1
PDLIM5-213ENST00000509357 WDPCPO95876 746 aa8.19□□□□□ -1.1
PDLIM5-213ENST00000509357 ATP5A1P25705 553 aaKnown RBP8.19□□□□□ -1.1
PDLIM5-213ENST00000509357 TPP2P29144 1249 aaPredicted RBP8.19□□□□□ -1.1
PDLIM5-213ENST00000509357 PPP2R1BP30154 601 aa8.19□□□□□ -1.1
PDLIM5-213ENST00000509357 SOX18P35713 384 aa8.19□□□□□ -1.1
PDLIM5-213ENST00000509357 SOX11P35716 441 aa8.19□□□□□ -1.1
PDLIM5-213ENST00000509357 ARL1P40616 181 aaPredicted RBP8.19□□□□□ -1.1
PDLIM5-213ENST00000509357 PIK3CBP42338 1070 aa8.19□□□□□ -1.1
PDLIM5-213ENST00000509357 TSFMP43897 325 aaKnown RBP8.19□□□□□ -1.1
PDLIM5-213ENST00000509357 SLC18A1P54219 525 aa8.19□□□□□ -1.1
PDLIM5-213ENST00000509357 PKNOX1P55347 436 aa8.19□□□□□ -1.1
PDLIM5-213ENST00000509357 BTG2P78543 158 aa8.19□□□□□ -1.1
PDLIM5-213ENST00000509357 RHAGQ02094 409 aa8.19□□□□□ -1.1
PDLIM5-213ENST00000509357 DUSP2Q05923 314 aa8.19□□□□□ -1.1
PDLIM5-213ENST00000509357 KIAA0040Q15053 153 aa8.19□□□□□ -1.1
PDLIM5-213ENST00000509357 FCRLBQ6BAA4 426 aa8.19□□□□□ -1.1
PDLIM5-213ENST00000509357 TRIM40Q6P9F5 258 aa8.19□□□□□ -1.1
PDLIM5-213ENST00000509357 FAM180AQ6UWF9 173 aa8.19□□□□□ -1.1
PDLIM5-213ENST00000509357 SLC5A8Q8N695 610 aa8.19□□□□□ -1.1
PDLIM5-213ENST00000509357 BCORP1Q8N888 145 aa8.19□□□□□ -1.1
PDLIM5-213ENST00000509357 M1APQ8TC57 530 aa8.19□□□□□ -1.1
PDLIM5-213ENST00000509357 AGR3Q8TD06 166 aa8.19□□□□□ -1.1
PDLIM5-213ENST00000509357 GRHL3Q8TE85 626 aa8.19□□□□□ -1.1
PDLIM5-213ENST00000509357 NUDT8Q8WV74 236 aa8.19□□□□□ -1.1
PDLIM5-213ENST00000509357 PSMF1Q92530 271 aa8.19□□□□□ -1.1
PDLIM5-213ENST00000509357 HAS2Q92819 552 aa8.19□□□□□ -1.1
PDLIM5-213ENST00000509357 UBE2E3Q969T4 207 aa8.19□□□□□ -1.1
PDLIM5-213ENST00000509357 ATP6V1E2Q96A05 226 aa8.19□□□□□ -1.1
PDLIM5-213ENST00000509357 SEC16BQ96JE7 1060 aa8.19□□□□□ -1.1
PDLIM5-213ENST00000509357 ZNF354BQ96LW1 612 aa8.19□□□□□ -1.1
PDLIM5-213ENST00000509357 PRDM9Q9NQV7 894 aa8.19□□□□□ -1.1
PDLIM5-213ENST00000509357 ASH1LQ9NR48 2969 aaKnown RBP8.19□□□□□ -1.1
PDLIM5-213ENST00000509357 PNPOQ9NVS9 261 aa8.19□□□□□ -1.1
PDLIM5-213ENST00000509357 HAO1Q9UJM8 370 aa8.19□□□□□ -1.1
PDLIM5-213ENST00000509357 PPT2Q9UMR5 302 aa8.19□□□□□ -1.1
PDLIM5-213ENST00000509357 EXO1Q9UQ84 846 aaKnown RBP8.19□□□□□ -1.1
PDLIM5-213ENST00000509357 MRPS33Q9Y291 106 aaKnown RBP8.19□□□□□ -1.1
PDLIM5-213ENST00000509357 ASB4Q9Y574 426 aa8.19□□□□□ -1.1
PDLIM5-213ENST00000509357 PCDHGA11Q9Y5H2 935 aa8.19□□□□□ -1.1
PDLIM5-213ENST00000509357 COL12A1Q99715 3063 aa8.18□□□□□ -1.1
PDLIM5-213ENST00000509357 HECTD1Q9ULT8 2610 aa8.18□□□□□ -1.1
PDLIM5-213ENST00000509357 SETXQ7Z333 2677 aaKnown RBP8.18□□□□□ -1.1
PDLIM5-213ENST00000509357 SERTM1A2A2V5 107 aa8.18□□□□□ -1.1
PDLIM5-213ENST00000509357 OR5H15A6NDH6 313 aa8.18□□□□□ -1.1
PDLIM5-213ENST00000509357 ZNF195O14628 629 aa8.18□□□□□ -1.1
PDLIM5-213ENST00000509357 BIRC5O15392 142 aa8.18□□□□□ -1.1
PDLIM5-213ENST00000509357 MLYCDO95822 493 aa8.18□□□□□ -1.1
PDLIM5-213ENST00000509357 SERPINE1P05121 402 aa8.18□□□□□ -1.1
PDLIM5-213ENST00000509357 MAOAP21397 527 aa8.18□□□□□ -1.1
PDLIM5-213ENST00000509357 HIST1H1TP22492 207 aaPredicted RBP8.18□□□□□ -1.1
PDLIM5-213ENST00000509357 TNFSF10P50591 281 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms