RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 SPHK1Q9NYA1 384 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 NKIRAS1Q9NYS0 192 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 CPSF2Q9P2I0 782 aaKnown RBP5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 COPG2Q9UBF2 871 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 TAC3Q9UHF0 121 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 IKZF3Q9UKT9 509 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 CNOT11Q9UKZ1 510 aaKnown RBP5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 EMCNQ9ULC0 261 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 PLAGL1Q9UM63 463 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 SLC22A14Q9Y267 594 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 TSC22D4Q9Y3Q8 395 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 ANGPTL3Q9Y5C1 460 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 ACACAQ13085 2346 aa5.24□□□□□ -1.57
HMGB1P44-201ENST00000508597 TMEM120BA0PK00 339 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 OR2A25A4D2G3 310 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 NCF1BA6NI72 391 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 A8MT66 165 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 NCF1CA8MVU1 366 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 G3V2L1 256 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 E2F3O00716 465 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 CCNT2O60583 730 aaKnown RBP5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 PRAMEF4O60810 478 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 CSO75390 466 aaKnown RBP5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 SPAG7O75391 227 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 RASSF9O75901 435 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 WDR47O94967 919 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 OTCP00480 354 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 RPS17P08708 135 aaKnown RBP5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 HBQ1P09105 142 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 SBK3P0C264 359 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 EBLN1P0CF75 366 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 DHRS4L1P0CG22 281 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 C1GALT1C1LP0DN25 315 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 NCF1P14598 390 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 CD82P27701 267 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 PEBP1P30086 187 aaKnown RBP5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 MSX2P35548 267 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 HNF4AP41235 474 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 KIR2DL3P43628 341 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 HSPA7P48741 367 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 CCR8P51685 355 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 GFERP55789 205 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 MAGOHP61326 146 aaKnown RBP5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 RPS15AP62244 130 aaKnown RBP5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 MC2RQ01718 297 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 ZNF33BQ06732 778 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 TSTA3Q13630 321 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 GTF2H2Q13888 395 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 GGTA1PQ4G0N0 100 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 TCTE1Q5JU00 501 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 CFAP157Q5JU67 520 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 ZNF678Q5SXM1 525 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 LCE5AQ5TCM9 118 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 KIAA1614Q5VZ46 1190 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 ATG9BQ674R7 924 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 ZNF425Q6IV72 752 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 NIPAL1Q6NVV3 410 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 GTF2H2CQ6P1K8 395 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 SUSD1Q6UWL2 747 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 CEACAM20Q6UY09 585 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 MBOAT1Q6ZNC8 495 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 CDHR3Q6ZTQ4 885 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 FAM92BQ6ZTR7 304 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 DGLUCYQ7Z3D6 616 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 PAQR7Q86WK9 346 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 ARFGAP2Q8N6H7 521 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 PPFIBP2Q8ND30 876 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 RAB3IL1Q8TBN0 382 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 ZNF483Q8TF39 744 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 GCDHQ92947 438 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 NEIL2Q969S2 332 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 ATP6V1E2Q96A05 226 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 REPS1Q96D71 796 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 PHF21BQ96EK2 531 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 PTCD3Q96EY7 689 aaKnown RBP5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 CNDP1Q96KN2 507 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 FAM111AQ96PZ2 611 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 TMEM79Q9BSE2 394 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 DPH7Q9BTV6 452 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 UNKQ9C0B0 810 aaKnown RBP5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 DRC3Q9H069 523 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 SLC6A15Q9H2J7 730 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 SYNDIG1Q9H7V2 258 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 BCO1Q9HAY6 547 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 EML4Q9HC35 981 aaKnown RBP5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 MSL2Q9HCI7 577 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 KCNK9Q9NPC2 374 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 FBXO8Q9NRD0 319 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 ZNF446Q9NWS9 450 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 PSD3Q9NYI0 1048 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 PLA2G3Q9NZ20 509 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 SERTAD3Q9UJW9 196 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 PLCL2Q9UPR0 1127 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 AP1M2Q9Y6Q5 423 aa5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 COL27A1Q8IZC6 1860 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P44-201ENST00000508597 CEP295Q9C0D2 2601 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 IGHV5-51A0A0C4DH38 117 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 TRBC2A0A5B9 178 aa5.22□□□□□ -1.57
HMGB1P44-201ENST00000508597 UBE2QL1A1L167 161 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms