RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 MAPKAP1Q9BPZ7 522 aa8.14□□□□□ -1.11
USP46-207ENST00000508499 SCNM1Q9BWG6 230 aa8.14□□□□□ -1.11
USP46-207ENST00000508499 SORBS1Q9BX66 1292 aaKnown RBP8.14□□□□□ -1.11
USP46-207ENST00000508499 MYLK2Q9H1R3 596 aa8.14□□□□□ -1.11
USP46-207ENST00000508499 CLMPQ9H6B4 373 aa8.14□□□□□ -1.11
USP46-207ENST00000508499 REEP4Q9H6H4 257 aa8.14□□□□□ -1.11
USP46-207ENST00000508499 WDR41Q9HAD4 459 aa8.14□□□□□ -1.11
USP46-207ENST00000508499 LANCL2Q9NS86 450 aa8.14□□□□□ -1.11
USP46-207ENST00000508499 FOXJ2Q9P0K8 574 aa8.14□□□□□ -1.11
USP46-207ENST00000508499 ATP6V1HQ9UI12 483 aa8.14□□□□□ -1.11
USP46-207ENST00000508499 KLK13Q9UKR3 277 aa8.14□□□□□ -1.11
USP46-207ENST00000508499 CES1P1Q9UKY3 287 aa8.14□□□□□ -1.11
USP46-207ENST00000508499 EXO1Q9UQ84 846 aaKnown RBP8.14□□□□□ -1.11
USP46-207ENST00000508499 ATG4BQ9Y4P1 393 aa8.14□□□□□ -1.11
USP46-207ENST00000508499 POLR3HQ9Y535 204 aaPredicted RBP8.14□□□□□ -1.11
USP46-207ENST00000508499 PCDHA9Q9Y5H5 950 aa8.14□□□□□ -1.11
USP46-207ENST00000508499 CLDN16Q9Y5I7 305 aa8.14□□□□□ -1.11
USP46-207ENST00000508499 SCN2AQ99250 2005 aa8.14□□□□□ -1.11
USP46-207ENST00000508499 IGKV3D-11A0A0A0MRZ8 115 aa8.13□□□□□ -1.11
USP46-207ENST00000508499 TRABD2BA6NFA1 517 aa8.13□□□□□ -1.11
USP46-207ENST00000508499 C9J4A7 227 aa8.13□□□□□ -1.11
USP46-207ENST00000508499 CLDN4O14493 209 aa8.13□□□□□ -1.11
USP46-207ENST00000508499 SCAMP2O15127 329 aaKnown RBP8.13□□□□□ -1.11
USP46-207ENST00000508499 BRINP1O60477 761 aa8.13□□□□□ -1.11
USP46-207ENST00000508499 CTNSO60931 367 aa8.13□□□□□ -1.11
USP46-207ENST00000508499 KLF7O75840 302 aaPredicted RBP8.13□□□□□ -1.11
USP46-207ENST00000508499 DCTN3O75935 186 aa8.13□□□□□ -1.11
USP46-207ENST00000508499 SLITRK5O94991 958 aa8.13□□□□□ -1.11
USP46-207ENST00000508499 AIFM1O95831 613 aa8.13□□□□□ -1.11
USP46-207ENST00000508499 STATHP02808 62 aa8.13□□□□□ -1.11
USP46-207ENST00000508499 CAPNS1P04632 268 aa8.13□□□□□ -1.11
USP46-207ENST00000508499 FHP07954 510 aa8.13□□□□□ -1.11
USP46-207ENST00000508499 NR2F6P10588 404 aa8.13□□□□□ -1.11
USP46-207ENST00000508499 GPX3P22352 226 aa8.13□□□□□ -1.11
USP46-207ENST00000508499 XCR1P46094 333 aa8.13□□□□□ -1.11
USP46-207ENST00000508499 OR1D4P47884 311 aa8.13□□□□□ -1.11
USP46-207ENST00000508499 ZFP36L2P47974 494 aaKnown RBP8.13□□□□□ -1.11
USP46-207ENST00000508499 HNRNPFP52597 415 aaKnown RBP8.13□□□□□ -1.11
USP46-207ENST00000508499 TAS2R50P59544 299 aa8.13□□□□□ -1.11
USP46-207ENST00000508499 SRSF11Q05519 484 aaKnown RBP8.13□□□□□ -1.11
USP46-207ENST00000508499 RCAN2Q14206 197 aa8.13□□□□□ -1.11
USP46-207ENST00000508499 PTGR1Q14914 329 aa8.13□□□□□ -1.11
USP46-207ENST00000508499 NCF4Q15080 339 aa8.13□□□□□ -1.11
USP46-207ENST00000508499 NKG7Q16617 165 aa8.13□□□□□ -1.11
USP46-207ENST00000508499 ARHGAP40Q5TG30 622 aa8.13□□□□□ -1.11
USP46-207ENST00000508499 TIPARPQ7Z3E1 657 aaKnown RBP8.13□□□□□ -1.11
USP46-207ENST00000508499 ZC3H7AQ8IWR0 971 aaKnown RBP8.13□□□□□ -1.11
USP46-207ENST00000508499 MIER2Q8N344 545 aa8.13□□□□□ -1.11
USP46-207ENST00000508499 GALNT6Q8NCL4 622 aa8.13□□□□□ -1.11
USP46-207ENST00000508499 OR5T3Q8NGG3 340 aa8.13□□□□□ -1.11
USP46-207ENST00000508499 OR2Y1Q8NGV0 311 aa8.13□□□□□ -1.11
USP46-207ENST00000508499 PSMA8Q8TAA3 256 aa8.13□□□□□ -1.11
USP46-207ENST00000508499 SNIP1Q8TAD8 396 aaKnown RBP8.13□□□□□ -1.11
USP46-207ENST00000508499 BCAS4Q8TDM0 211 aa8.13□□□□□ -1.11
USP46-207ENST00000508499 NKD1Q969G9 470 aa8.13□□□□□ -1.11
USP46-207ENST00000508499 PPP1R36Q96LQ0 422 aa8.13□□□□□ -1.11
USP46-207ENST00000508499 RILPQ96NA2 401 aa8.13□□□□□ -1.11
USP46-207ENST00000508499 SPSB2Q99619 263 aa8.13□□□□□ -1.11
USP46-207ENST00000508499 PRPF18Q99633 342 aaKnown RBP8.13□□□□□ -1.11
USP46-207ENST00000508499 EFHD1Q9BUP0 239 aa8.13□□□□□ -1.11
USP46-207ENST00000508499 BHLHE41Q9C0J9 482 aaPredicted RBP8.13□□□□□ -1.11
USP46-207ENST00000508499 RPF2Q9H7B2 306 aaKnown RBP8.13□□□□□ -1.11
USP46-207ENST00000508499 SAR1AQ9NR31 198 aa8.13□□□□□ -1.11
USP46-207ENST00000508499 ATAD3AQ9NVI7 634 aa8.13□□□□□ -1.11
USP46-207ENST00000508499 TEX10Q9NXF1 929 aaPredicted RBP8.13□□□□□ -1.11
USP46-207ENST00000508499 IFT80Q9P2H3 777 aaPredicted RBP8.13□□□□□ -1.11
USP46-207ENST00000508499 GIMAP2Q9UG22 337 aa8.13□□□□□ -1.11
USP46-207ENST00000508499 NDOR1Q9UHB4 597 aa8.13□□□□□ -1.11
USP46-207ENST00000508499 KCND3Q9UK17 655 aa8.13□□□□□ -1.11
USP46-207ENST00000508499 PSME2Q9UL46 239 aa8.13□□□□□ -1.11
USP46-207ENST00000508499 PADI2Q9Y2J8 665 aa8.13□□□□□ -1.11
USP46-207ENST00000508499 COPG1Q9Y678 874 aaKnown RBP8.13□□□□□ -1.11
USP46-207ENST00000508499 A0A0G2JN53 185 aa8.12□□□□□ -1.11
USP46-207ENST00000508499 E9PBE3 544 aa8.12□□□□□ -1.11
USP46-207ENST00000508499 PSMD12O00232 456 aaPredicted RBP8.12□□□□□ -1.11
USP46-207ENST00000508499 NDUFAB1O14561 156 aa8.12□□□□□ -1.11
USP46-207ENST00000508499 KLHL41O60662 606 aa8.12□□□□□ -1.11
USP46-207ENST00000508499 RAD1O60671 282 aa8.12□□□□□ -1.11
USP46-207ENST00000508499 SH3BGRLO75368 114 aa8.12□□□□□ -1.11
USP46-207ENST00000508499 SLC22A3O75751 556 aa8.12□□□□□ -1.11
USP46-207ENST00000508499 IGHEP01854 428 aa8.12□□□□□ -1.11
USP46-207ENST00000508499 GBAP04062 536 aa8.12□□□□□ -1.11
USP46-207ENST00000508499 ATP1B1P05026 303 aa8.12□□□□□ -1.11
USP46-207ENST00000508499 IL6P05231 212 aa8.12□□□□□ -1.11
USP46-207ENST00000508499 IL3P08700 152 aa8.12□□□□□ -1.11
USP46-207ENST00000508499 ZGLP1P0C6A0 271 aa8.12□□□□□ -1.11
USP46-207ENST00000508499 CPN2P22792 545 aa8.12□□□□□ -1.11
USP46-207ENST00000508499 HPCAL1P37235 193 aa8.12□□□□□ -1.11
USP46-207ENST00000508499 STX1BP61266 288 aa8.12□□□□□ -1.11
USP46-207ENST00000508499 RHAGQ02094 409 aa8.12□□□□□ -1.11
USP46-207ENST00000508499 OCA2Q04671 838 aa8.12□□□□□ -1.11
USP46-207ENST00000508499 FOXC1Q12948 553 aa8.12□□□□□ -1.11
USP46-207ENST00000508499 SERTAD2Q14140 314 aa8.12□□□□□ -1.11
USP46-207ENST00000508499 TERF2Q15554 542 aa8.12□□□□□ -1.11
USP46-207ENST00000508499 COQ5Q5HYK3 327 aa8.12□□□□□ -1.11
USP46-207ENST00000508499 TMEM198Q66K66 360 aa8.12□□□□□ -1.11
USP46-207ENST00000508499 NXNQ6DKJ4 435 aa8.12□□□□□ -1.11
USP46-207ENST00000508499 TMEM205Q6UW68 189 aa8.12□□□□□ -1.11
USP46-207ENST00000508499 DTWD1Q8N5C7 304 aa8.12□□□□□ -1.11
USP46-207ENST00000508499 CCDC197Q8NCU1 140 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms