RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 GPATCH11Q8N954 259 aa3.24□□□□□ -1.89
UBE2D3-225ENST00000508476 CLEC1AQ8NC01 280 aa3.24□□□□□ -1.89
UBE2D3-225ENST00000508476 NTNG2Q96CW9 530 aa3.24□□□□□ -1.89
UBE2D3-225ENST00000508476 ERGIC2Q96RQ1 377 aa3.24□□□□□ -1.89
UBE2D3-225ENST00000508476 FERMT1Q9BQL6 677 aa3.24□□□□□ -1.89
UBE2D3-225ENST00000508476 DEFB126Q9BYW3 111 aa3.24□□□□□ -1.89
UBE2D3-225ENST00000508476 ZNF665Q9H7R5 613 aa3.24□□□□□ -1.89
UBE2D3-225ENST00000508476 PDFQ9HBH1 243 aa3.24□□□□□ -1.89
UBE2D3-225ENST00000508476 S100A14Q9HCY8 104 aa3.24□□□□□ -1.89
UBE2D3-225ENST00000508476 NFKBIL1Q9UBC1 381 aaPredicted RBP3.24□□□□□ -1.89
UBE2D3-225ENST00000508476 FAM205AQ6ZU69 1335 aa3.23□□□□□ -1.89
UBE2D3-225ENST00000508476 FAM220BPB1ANY3 271 aa3.23□□□□□ -1.89
UBE2D3-225ENST00000508476 FHP07954 510 aa3.23□□□□□ -1.89
UBE2D3-225ENST00000508476 ZFYP08048 801 aaPredicted RBP3.23□□□□□ -1.89
UBE2D3-225ENST00000508476 ALDH3B1P43353 468 aa3.23□□□□□ -1.89
UBE2D3-225ENST00000508476 ATRXP46100 2492 aa3.23□□□□□ -1.89
UBE2D3-225ENST00000508476 BRCC3P46736 316 aa3.23□□□□□ -1.89
UBE2D3-225ENST00000508476 FHITP49789 147 aa3.23□□□□□ -1.89
UBE2D3-225ENST00000508476 NUCB1Q02818 461 aa3.23□□□□□ -1.89
UBE2D3-225ENST00000508476 NOTCH2Q04721 2471 aa3.23□□□□□ -1.89
UBE2D3-225ENST00000508476 LYPLAL1Q5VWZ2 237 aa3.23□□□□□ -1.89
UBE2D3-225ENST00000508476 TMED8Q6PL24 325 aaPredicted RBP3.23□□□□□ -1.89
UBE2D3-225ENST00000508476 ZNF730Q6ZMV8 503 aa3.23□□□□□ -1.89
UBE2D3-225ENST00000508476 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.23□□□□□ -1.89
UBE2D3-225ENST00000508476 PHYHIPLQ96FC7 376 aa3.23□□□□□ -1.89
UBE2D3-225ENST00000508476 ZBP1Q9H171 429 aa3.23□□□□□ -1.89
UBE2D3-225ENST00000508476 NT5DC2Q9H857 520 aa3.23□□□□□ -1.89
UBE2D3-225ENST00000508476 CLIC5Q9NZA1 410 aa3.23□□□□□ -1.89
UBE2D3-225ENST00000508476 RCOR3Q9P2K3 495 aaPredicted RBP3.23□□□□□ -1.89
UBE2D3-225ENST00000508476 ETV7Q9Y603 341 aa3.23□□□□□ -1.89
UBE2D3-225ENST00000508476 LAMC3Q9Y6N6 1575 aa3.23□□□□□ -1.89
UBE2D3-225ENST00000508476 PFASO15067 1338 aa3.22□□□□□ -1.89
UBE2D3-225ENST00000508476 ARHGEF37A1IGU5 675 aa3.22□□□□□ -1.89
UBE2D3-225ENST00000508476 SAP18O00422 153 aaKnown RBP3.22□□□□□ -1.89
UBE2D3-225ENST00000508476 CDX4O14627 284 aaPredicted RBP3.22□□□□□ -1.89
UBE2D3-225ENST00000508476 CENPBP07199 599 aaPredicted RBP3.22□□□□□ -1.89
UBE2D3-225ENST00000508476 BDNFP23560 247 aa3.22□□□□□ -1.89
UBE2D3-225ENST00000508476 NPBWR1P48145 328 aa3.22□□□□□ -1.89
UBE2D3-225ENST00000508476 LCP2Q13094 533 aa3.22□□□□□ -1.89
UBE2D3-225ENST00000508476 SLFN11Q7Z7L1 901 aa3.22□□□□□ -1.89
UBE2D3-225ENST00000508476 DZIP1Q86YF9 867 aaKnown RBP3.22□□□□□ -1.89
UBE2D3-225ENST00000508476 SLC22A18ASQ8N1D0 253 aa3.22□□□□□ -1.89
UBE2D3-225ENST00000508476 SAMD12Q8N8I0 201 aa3.22□□□□□ -1.89
UBE2D3-225ENST00000508476 RNF149Q8NC42 400 aa3.22□□□□□ -1.89
UBE2D3-225ENST00000508476 KIAA0895Q8NCT3 520 aa3.22□□□□□ -1.89
UBE2D3-225ENST00000508476 ESAMQ96AP7 390 aa3.22□□□□□ -1.89
UBE2D3-225ENST00000508476 CDHR1Q96JP9 859 aa3.22□□□□□ -1.89
UBE2D3-225ENST00000508476 ZNF275Q9NSD4 429 aaPredicted RBP3.22□□□□□ -1.89
UBE2D3-225ENST00000508476 FAM212BQ9NTI7 297 aaPredicted RBP3.22□□□□□ -1.89
UBE2D3-225ENST00000508476 ZNF319Q9P2F9 582 aa3.22□□□□□ -1.89
UBE2D3-225ENST00000508476 WDR62O43379 1518 aa3.21□□□□□ -1.9
UBE2D3-225ENST00000508476 ILVBLA1L0T0 632 aa3.21□□□□□ -1.9
UBE2D3-225ENST00000508476 E7ENQ6 273 aa3.21□□□□□ -1.9
UBE2D3-225ENST00000508476 CTDSPLO15194 276 aa3.21□□□□□ -1.9
UBE2D3-225ENST00000508476 ST8SIA3O43173 380 aa3.21□□□□□ -1.9
UBE2D3-225ENST00000508476 GRAP2O75791 330 aa3.21□□□□□ -1.9
UBE2D3-225ENST00000508476 CCDC159P0C7I6 412 aa3.21□□□□□ -1.9
UBE2D3-225ENST00000508476 SKILP12757 684 aa3.21□□□□□ -1.9
UBE2D3-225ENST00000508476 TTC31Q49AM3 519 aaPredicted RBP3.21□□□□□ -1.9
UBE2D3-225ENST00000508476 DMKNQ6E0U4 476 aaPredicted RBP3.21□□□□□ -1.9
UBE2D3-225ENST00000508476 NME8Q8N427 588 aa3.21□□□□□ -1.9
UBE2D3-225ENST00000508476 ATG101Q9BSB4 218 aa3.21□□□□□ -1.9
UBE2D3-225ENST00000508476 TRIM7Q9C029 511 aa3.21□□□□□ -1.9
UBE2D3-225ENST00000508476 PFDN4Q9NQP4 134 aa3.21□□□□□ -1.9
UBE2D3-225ENST00000508476 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.21□□□□□ -1.9
UBE2D3-225ENST00000508476 MRPL17Q9NRX2 175 aaKnown RBP3.21□□□□□ -1.9
UBE2D3-225ENST00000508476 KIF21AQ7Z4S6 1674 aa3.2□□□□□ -1.9
UBE2D3-225ENST00000508476 H0Y9J4 135 aa3.2□□□□□ -1.9
UBE2D3-225ENST00000508476 MCF2LO15068 1137 aa3.2□□□□□ -1.9
UBE2D3-225ENST00000508476 DUSP11O75319 330 aaKnown RBP3.2□□□□□ -1.9
UBE2D3-225ENST00000508476 CSO75390 466 aaKnown RBP3.2□□□□□ -1.9
UBE2D3-225ENST00000508476 CLN5O75503 358 aa3.2□□□□□ -1.9
UBE2D3-225ENST00000508476 PRB2P02812 416 aaPredicted RBP3.2□□□□□ -1.9
UBE2D3-225ENST00000508476 ATP6V1B1P15313 513 aa3.2□□□□□ -1.9
UBE2D3-225ENST00000508476 SLC17A1Q14916 467 aa3.2□□□□□ -1.9
UBE2D3-225ENST00000508476 LIPJQ5W064 366 aa3.2□□□□□ -1.9
UBE2D3-225ENST00000508476 SIGLEC15Q6ZMC9 328 aa3.2□□□□□ -1.9
UBE2D3-225ENST00000508476 VASH2Q86V25 355 aa3.2□□□□□ -1.9
UBE2D3-225ENST00000508476 PRR22Q8IZ63 422 aa3.2□□□□□ -1.9
UBE2D3-225ENST00000508476 ZBED6CLQ96FA7 236 aaPredicted RBP3.2□□□□□ -1.9
UBE2D3-225ENST00000508476 RAB3IPQ96QF0 476 aaPredicted RBP3.2□□□□□ -1.9
UBE2D3-225ENST00000508476 LSG1Q9H089 658 aaKnown RBP3.2□□□□□ -1.9
UBE2D3-225ENST00000508476 VIPAS39Q9H9C1 493 aa3.2□□□□□ -1.9
UBE2D3-225ENST00000508476 CLEC4EQ9ULY5 219 aa3.2□□□□□ -1.9
UBE2D3-225ENST00000508476 ADGRL1O94910 1474 aa3.2□□□□□ -1.9
UBE2D3-225ENST00000508476 RLN1P04808 185 aa3.19□□□□□ -1.9
UBE2D3-225ENST00000508476 ODC1P11926 461 aa3.19□□□□□ -1.9
UBE2D3-225ENST00000508476 FOSL2P15408 326 aa3.19□□□□□ -1.9
UBE2D3-225ENST00000508476 CALRP27797 417 aaKnown RBP3.19□□□□□ -1.9
UBE2D3-225ENST00000508476 PPP2R1AP30153 589 aa3.19□□□□□ -1.9
UBE2D3-225ENST00000508476 MDH2P40926 338 aaKnown RBP3.19□□□□□ -1.9
UBE2D3-225ENST00000508476 KCNJ1P48048 391 aa3.19□□□□□ -1.9
UBE2D3-225ENST00000508476 RPL27P61353 136 aaKnown RBP3.19□□□□□ -1.9
UBE2D3-225ENST00000508476 C2orf83Q53S99 150 aa3.19□□□□□ -1.9
UBE2D3-225ENST00000508476 UXS1Q8NBZ7 420 aa3.19□□□□□ -1.9
UBE2D3-225ENST00000508476 SIGLEC12Q96PQ1 595 aa3.19□□□□□ -1.9
UBE2D3-225ENST00000508476 TNMDQ9H2S6 317 aa3.19□□□□□ -1.9
UBE2D3-225ENST00000508476 GPR132Q9UNW8 380 aa3.19□□□□□ -1.9
UBE2D3-225ENST00000508476 RNF24Q9Y225 148 aa3.19□□□□□ -1.9
UBE2D3-225ENST00000508476 ATAD2BQ9ULI0 1458 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms