RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 PRAP1Q96NZ9 151 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 LMF1Q96S06 567 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 HIST1H2AJQ99878 128 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 TUBA1CQ9BQE3 449 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 H2AFJQ9BTM1 129 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 YIPF2Q9BWQ6 316 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 MOV10Q9HCE1 1003 aaKnown RBP7.6□□□□□ -1.19
SCN1A-207ENST00000507401 BRD7Q9NPI1 651 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 SLAMF7Q9NQ25 335 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 PNPLA3Q9NST1 481 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 THAP1Q9NVV9 213 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 TAC3Q9UHF0 121 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 VPS4AQ9UN37 437 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 MYRFQ9Y2G1 1151 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 HS3ST3B1Q9Y662 390 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 TEX264Q9Y6I9 313 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 PCSK5Q92824 1860 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 MDC1Q14676 2089 aaKnown RBP7.59□□□□□ -1.19
SCN1A-207ENST00000507401 POC1B-GALNT4F8VUJ3 575 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 H0YIG0 161 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 COPEO14579 308 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 IDH3BO43837 385 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 NRP2O60462 931 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 NOL3O60936 208 aaKnown RBP7.59□□□□□ -1.19
SCN1A-207ENST00000507401 SNNO75324 88 aaPredicted RBP7.59□□□□□ -1.19
SCN1A-207ENST00000507401 H2AFYO75367 372 aaKnown RBP7.59□□□□□ -1.19
SCN1A-207ENST00000507401 KRT38O76015 456 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 MED26O95402 600 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 INHBAP08476 426 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 SNRPAP09012 282 aaKnown RBP7.59□□□□□ -1.19
SCN1A-207ENST00000507401 OCM2P0CE71 109 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 OCMP0CE72 109 aaPredicted RBP7.59□□□□□ -1.19
SCN1A-207ENST00000507401 ETS2P15036 469 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 NPPBP16860 134 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 CPOXP36551 454 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 BCAP31P51572 246 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 AQP4P55087 323 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 AP1S2P56377 157 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 RPS15AP62244 130 aaKnown RBP7.59□□□□□ -1.19
SCN1A-207ENST00000507401 RIPPLY1Q0D2K3 151 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 SF3A3Q12874 501 aaKnown RBP eCLIP7.59□□□□□ -1.19
SCN1A-207ENST00000507401 PDIA2Q13087 525 aaKnown RBP7.59□□□□□ -1.19
SCN1A-207ENST00000507401 TSTA3Q13630 321 aaPredicted RBP7.59□□□□□ -1.19
SCN1A-207ENST00000507401 INPP5JQ15735 1006 aaPredicted RBP7.59□□□□□ -1.19
SCN1A-207ENST00000507401 RBBP7Q16576 425 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 MOGQ16653 247 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 NDUFA9Q16795 377 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 GRAMD1BQ3KR37 738 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 PLEKHN1Q494U1 663 aaPredicted RBP7.59□□□□□ -1.19
SCN1A-207ENST00000507401 ZBED5Q49AG3 693 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 AGAP7PQ5VUJ5 663 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 STEAP4Q687X5 459 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 SLC6A19Q695T7 634 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 AGTRAPQ6RW13 159 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 Q6ZS92 163 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 RAPH1Q70E73 1250 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 CYS1Q717R9 158 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 PIWIL4Q7Z3Z4 852 aaKnown RBP7.59□□□□□ -1.19
SCN1A-207ENST00000507401 TICAM1Q8IUC6 712 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 SLC15A3Q8IY34 581 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 ZADH2Q8N4Q0 377 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 FAM26EQ8N5C1 309 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 TRIML2Q8N7C3 387 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 Q8NA96 180 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 TSPAN14Q8NG11 270 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 OR11G2Q8NGC1 345 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 RFWD2Q8NHY2 731 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 SLC26A7Q8TE54 656 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 MZB1Q8WU39 189 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 TRUB1Q8WWH5 349 aaKnown RBP7.59□□□□□ -1.19
SCN1A-207ENST00000507401 ATL1Q8WXF7 558 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 TM4SF19Q96DZ7 209 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 C10orf90Q96M02 699 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 AGAP4Q96P64 663 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 PAFAH2Q99487 392 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 CRB3Q9BUF7 120 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 C1orf50Q9BV19 199 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 SARGQ9BW04 601 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 SGPP1Q9BX95 441 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 TRIM54Q9BYV2 358 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 NMUR2Q9GZQ4 415 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 LHPPQ9H008 270 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 SOX17Q9H6I2 414 aaPredicted RBP7.59□□□□□ -1.19
SCN1A-207ENST00000507401 PLAC1Q9HBJ0 212 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 TMEM165Q9HC07 324 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 MKKSQ9NPJ1 570 aaPredicted RBP7.59□□□□□ -1.19
SCN1A-207ENST00000507401 CCDC177Q9NQR7 707 aaPredicted RBP7.59□□□□□ -1.19
SCN1A-207ENST00000507401 MOCS1Q9NZB8 636 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 STOX2Q9P2F5 926 aaPredicted RBP7.59□□□□□ -1.19
SCN1A-207ENST00000507401 CTSFQ9UBX1 484 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 FBXL4Q9UKA2 621 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 ADAMTS6Q9UKP5 1117 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 PDE10AQ9Y233 779 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 RUVBL1Q9Y265 456 aaKnown RBP7.59□□□□□ -1.19
SCN1A-207ENST00000507401 CEPT1Q9Y6K0 416 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 MAU2Q9Y6X3 613 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 LRRK2Q5S007 2527 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 HECTD1Q9ULT8 2610 aa7.59□□□□□ -1.19
SCN1A-207ENST00000507401 NUP210LQ5VU65 1888 aa7.58□□□□□ -1.2
SCN1A-207ENST00000507401 RELNP78509 3460 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms