RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 ODF4Q2M2E3 257 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 COL28A1Q2UY09 1125 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 ITPRIPL2Q3MIP1 535 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 BEX5Q5H9J7 111 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 PAGE2BQ5JRK9 111 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 TMEM31Q5JXX7 168 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 UBAP2Q5T6F2 1119 aaKnown RBP3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 C10orf25Q5T742 122 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 LGSNQ5TDP6 509 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 ZNF658Q5TYW1 1059 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 NKAIN2Q5VXU1 208 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 FAM90A2PQ658T7 463 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 UGT3A1Q6NUS8 523 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 TMEM53Q6P2H8 277 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 ACSM6Q6P461 480 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 PODNL1Q6PEZ8 512 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 DOK6Q6PKX4 331 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 FAM159AQ6UWV7 190 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 SLC39A5Q6ZMH5 540 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 ASPGQ86U10 573 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 TBC1D26Q86UD7 250 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 ZNF280BQ86YH2 543 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 AQP12AQ8IXF9 295 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 C10orf67Q8IYJ2 551 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 ZBTB2Q8N680 514 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 LRRC17Q8N6Y2 441 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 GATSQ8NAP1 163 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 SMYD1Q8NB12 490 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 SYT14Q8NB59 555 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 HJURPQ8NCD3 748 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 SMRP1Q8NCR6 262 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 OR7G1Q8NGA0 311 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 BBS10Q8TAM1 723 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 ZNF398Q8TD17 642 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 GDPD5Q8WTR4 605 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 TMEM171Q8WVE6 324 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 SLC44A1Q8WWI5 657 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 EMG1Q92979 244 aaKnown RBP3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 ZC3HAV1LQ96H79 300 aaKnown RBP3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 PRR25Q96S07 402 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 MTERF1Q99551 399 aaKnown RBP3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 OMDQ99983 421 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 MED10Q9BTT4 135 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 BBS2Q9BXC9 721 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 GSDMCQ9BYG8 508 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 GOLPH3Q9H4A6 298 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 SLC28A3Q9HAS3 691 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 ECHDC1Q9NTX5 307 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 ASIC5Q9NY37 505 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 TXNDC16Q9P2K2 825 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 TMEM184BQ9Y519 407 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 NPTNQ9Y639 398 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 TTC3P53804 2025 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 ELP1O95163 1332 aa3.39□□□□□ -1.87
HMGB3P15-201ENST00000507326 SMARCA2P51531 1590 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 FHAD1B1AJZ9 1412 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 A0A1W2PRB8 838 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 TMEM129A0AVI4 362 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 CPED1A4D0V7 1026 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 ANKRD61A6NGH8 418 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 ANKDD1BA6NHY2 528 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 ARHGEF33A8MVX0 844 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 E7ESA3 106 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 E7EWF7 191 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 AGPSO00116 658 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 CLDN5O00501 218 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 BCKDKO14874 412 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 OR10H2O60403 315 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 CABYRO75952 493 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 H6PDO95479 791 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 CA3P07451 260 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 APRTP07741 180 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 RETP07949 1114 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 PEPDP12955 493 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 GNSP15586 552 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 POLR2EP19388 210 aaKnown RBP3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 RAB4AP20338 218 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 PRPH2P23942 346 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 PRDX6P30041 224 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 STX2P32856 288 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 HTR7P34969 479 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 NAMPTP43490 491 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 POU3F4P49335 361 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 CLCN3P51790 818 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 RAD23BP54727 409 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 KCNK10P57789 538 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 SUMO2P61956 95 aaKnown RBP3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 PSG6Q00889 435 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 SLC3A1Q07837 685 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 BST1Q10588 318 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 TRAF2Q12933 501 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 DMP1Q13316 513 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 ART3Q13508 389 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 RCAN2Q14206 197 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 CAPRIN1Q14444 709 aaKnown RBP3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 GRB14Q14449 540 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 NONOQ15233 471 aaKnown RBP eCLIP3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 TAF13Q15543 124 aa3.38□□□□□ -1.87
HMGB3P15-201ENST00000507326 TWIST1Q15672 202 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms