RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 TMEM52Q8NDY8 209 aa13.41□□□□□ -0.26
HMGCS1-203ENST00000507004 NUBPLQ8TB37 319 aa13.41□□□□□ -0.26
HMGCS1-203ENST00000507004 FAM57AQ8TBR7 257 aa13.41□□□□□ -0.26
HMGCS1-203ENST00000507004 RBM18Q96H35 190 aaKnown RBP13.41□□□□□ -0.26
HMGCS1-203ENST00000507004 CSF3RQ99062 836 aa13.41□□□□□ -0.26
HMGCS1-203ENST00000507004 TSPAN10Q9H1Z9 355 aaPredicted RBP13.41□□□□□ -0.26
HMGCS1-203ENST00000507004 ACTR8Q9H981 624 aa13.41□□□□□ -0.26
HMGCS1-203ENST00000507004 WDR41Q9HAD4 459 aa13.41□□□□□ -0.26
HMGCS1-203ENST00000507004 LYARQ9NX58 379 aaKnown RBP13.41□□□□□ -0.26
HMGCS1-203ENST00000507004 ZNF223Q9UK11 482 aaPredicted RBP13.41□□□□□ -0.26
HMGCS1-203ENST00000507004 PPT2Q9UMR5 302 aa13.41□□□□□ -0.26
HMGCS1-203ENST00000507004 H0YIV9 168 aa13.4□□□□□ -0.26
HMGCS1-203ENST00000507004 TGFBR3LH3BV60 316 aa13.4□□□□□ -0.26
HMGCS1-203ENST00000507004 KLK8O60259 260 aa13.4□□□□□ -0.26
HMGCS1-203ENST00000507004 OR2J2O76002 312 aa13.4□□□□□ -0.26
HMGCS1-203ENST00000507004 KLHL2O95198 593 aa13.4□□□□□ -0.26
HMGCS1-203ENST00000507004 TGFB1P01137 390 aa13.4□□□□□ -0.26
HMGCS1-203ENST00000507004 RBP1P09455 135 aa13.4□□□□□ -0.26
HMGCS1-203ENST00000507004 TNFRSF8P28908 595 aa13.4□□□□□ -0.26
HMGCS1-203ENST00000507004 TYK2P29597 1187 aa13.4□□□□□ -0.26
HMGCS1-203ENST00000507004 STT3AP46977 705 aa13.4□□□□□ -0.26
HMGCS1-203ENST00000507004 RNF4P78317 190 aa13.4□□□□□ -0.26
HMGCS1-203ENST00000507004 IGLV3-21P80748 117 aaPredicted RBP13.4□□□□□ -0.26
HMGCS1-203ENST00000507004 ADORA2A-AS1P86434 159 aa13.4□□□□□ -0.26
HMGCS1-203ENST00000507004 DLG1Q12959 904 aa13.4□□□□□ -0.26
HMGCS1-203ENST00000507004 CUL3Q13618 768 aa13.4□□□□□ -0.26
HMGCS1-203ENST00000507004 WHAMMP3Q1A5X7 153 aa13.4□□□□□ -0.26
HMGCS1-203ENST00000507004 MPEG1Q2M385 716 aa13.4□□□□□ -0.26
HMGCS1-203ENST00000507004 FBXO48Q5FWF7 155 aa13.4□□□□□ -0.26
HMGCS1-203ENST00000507004 ZNF793Q6ZN11 406 aa13.4□□□□□ -0.26
HMGCS1-203ENST00000507004 UBE3DQ7Z6J8 389 aa13.4□□□□□ -0.26
HMGCS1-203ENST00000507004 CLNKQ7Z7G1 428 aa13.4□□□□□ -0.26
HMGCS1-203ENST00000507004 GPR180Q86V85 440 aa13.4□□□□□ -0.26
HMGCS1-203ENST00000507004 SLC22A16Q86VW1 577 aa13.4□□□□□ -0.26
HMGCS1-203ENST00000507004 DOLPP1Q86YN1 238 aa13.4□□□□□ -0.26
HMGCS1-203ENST00000507004 MCEMP1Q8IX19 187 aa13.4□□□□□ -0.26
HMGCS1-203ENST00000507004 SLC15A4Q8N697 577 aa13.4□□□□□ -0.26
HMGCS1-203ENST00000507004 TEX9Q8N6V9 391 aa13.4□□□□□ -0.26
HMGCS1-203ENST00000507004 HUS1BQ8NHY5 278 aa13.4□□□□□ -0.26
HMGCS1-203ENST00000507004 SLC22A8Q8TCC7 542 aa13.4□□□□□ -0.26
HMGCS1-203ENST00000507004 SLC2A12Q8TD20 617 aa13.4□□□□□ -0.26
HMGCS1-203ENST00000507004 AGAP11Q8TF27 550 aa13.4□□□□□ -0.26
HMGCS1-203ENST00000507004 PTPMT1Q8WUK0 201 aaPredicted RBP13.4□□□□□ -0.26
HMGCS1-203ENST00000507004 ASB5Q8WWX0 329 aa13.4□□□□□ -0.26
HMGCS1-203ENST00000507004 NXNL1Q96CM4 212 aa13.4□□□□□ -0.26
HMGCS1-203ENST00000507004 MTFMTQ96DP5 389 aaKnown RBP13.4□□□□□ -0.26
HMGCS1-203ENST00000507004 DGAT2Q96PD7 388 aa13.4□□□□□ -0.26
HMGCS1-203ENST00000507004 RASL10BQ96S79 203 aa13.4□□□□□ -0.26
HMGCS1-203ENST00000507004 MAPKAP1Q9BPZ7 522 aa13.4□□□□□ -0.26
HMGCS1-203ENST00000507004 OR8D2Q9GZM6 311 aa13.4□□□□□ -0.26
HMGCS1-203ENST00000507004 TP63Q9H3D4 680 aaPredicted RBP13.4□□□□□ -0.26
HMGCS1-203ENST00000507004 RPF2Q9H7B2 306 aaKnown RBP13.4□□□□□ -0.26
HMGCS1-203ENST00000507004 SNX15Q9NRS6 342 aa13.4□□□□□ -0.26
HMGCS1-203ENST00000507004 PLSCR2Q9NRY7 297 aa13.4□□□□□ -0.26
HMGCS1-203ENST00000507004 ASB1Q9Y576 335 aa13.4□□□□□ -0.26
HMGCS1-203ENST00000507004 IKBKGQ9Y6K9 419 aa13.4□□□□□ -0.26
HMGCS1-203ENST00000507004 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.4□□□□□ -0.262e-7■■□□□ 14.1
HMGCS1-203ENST00000507004 NCOA6Q14686 2063 aaPredicted RBP13.4□□□□□ -0.27
HMGCS1-203ENST00000507004 A0A096LPK6 155 aa13.39□□□□□ -0.27
HMGCS1-203ENST00000507004 OR14I1A6ND48 311 aa13.39□□□□□ -0.27
HMGCS1-203ENST00000507004 FAM155BO75949 473 aa13.39□□□□□ -0.27
HMGCS1-203ENST00000507004 MTHFD2P13995 350 aa13.39□□□□□ -0.27
HMGCS1-203ENST00000507004 CNR1P21554 472 aa13.39□□□□□ -0.27
HMGCS1-203ENST00000507004 CNTFP26441 200 aa13.39□□□□□ -0.27
HMGCS1-203ENST00000507004 GALNSP34059 522 aa13.39□□□□□ -0.27
HMGCS1-203ENST00000507004 SERPINB9P50453 376 aa13.39□□□□□ -0.27
HMGCS1-203ENST00000507004 HK2P52789 917 aa13.39□□□□□ -0.27
HMGCS1-203ENST00000507004 PLGLB1Q02325 96 aa13.39□□□□□ -0.27
HMGCS1-203ENST00000507004 SLAMF1Q13291 335 aa13.39□□□□□ -0.27
HMGCS1-203ENST00000507004 TSNAXIP1Q2TAA8 658 aa13.39□□□□□ -0.27
HMGCS1-203ENST00000507004 RNFT1Q5M7Z0 435 aa13.39□□□□□ -0.27
HMGCS1-203ENST00000507004 MROH9Q5TGP6 573 aa13.39□□□□□ -0.27
HMGCS1-203ENST00000507004 ADNP2Q6IQ32 1131 aa13.39□□□□□ -0.27
HMGCS1-203ENST00000507004 MYLK4Q86YV6 388 aaPredicted RBP13.39□□□□□ -0.27
HMGCS1-203ENST00000507004 ST13P4Q8IZP2 240 aaPredicted RBP13.39□□□□□ -0.27
HMGCS1-203ENST00000507004 CENPLQ8N0S6 344 aaPredicted RBP13.39□□□□□ -0.27
HMGCS1-203ENST00000507004 MNS1Q8NEH6 495 aa13.39□□□□□ -0.27
HMGCS1-203ENST00000507004 KCTD4Q8WVF5 259 aa13.39□□□□□ -0.27
HMGCS1-203ENST00000507004 DMRTA2Q96SC8 542 aa13.39□□□□□ -0.27
HMGCS1-203ENST00000507004 FAM173AQ9BQD7 235 aa13.39□□□□□ -0.27
HMGCS1-203ENST00000507004 FUT8Q9BYC5 575 aa13.39□□□□□ -0.27
HMGCS1-203ENST00000507004 ACSS3Q9H6R3 686 aa13.39□□□□□ -0.27
HMGCS1-203ENST00000507004 DMRT3Q9NQL9 472 aa13.39□□□□□ -0.27
HMGCS1-203ENST00000507004 MYO9AB2RTY4 2548 aa13.39□□□□□ -0.27
HMGCS1-203ENST00000507004 FOXE1O00358 373 aaPredicted RBP13.38□□□□□ -0.27
HMGCS1-203ENST00000507004 HS6ST1O60243 411 aa13.38□□□□□ -0.27
HMGCS1-203ENST00000507004 LDB3O75112 727 aa13.38□□□□□ -0.27
HMGCS1-203ENST00000507004 SEMA3DO95025 777 aa13.38□□□□□ -0.27
HMGCS1-203ENST00000507004 P04436 131 aa13.38□□□□□ -0.27
HMGCS1-203ENST00000507004 TPOP07202 933 aa13.38□□□□□ -0.27
HMGCS1-203ENST00000507004 INHBAP08476 426 aa13.38□□□□□ -0.27
HMGCS1-203ENST00000507004 COL6A2P12110 1019 aa13.38□□□□□ -0.27
HMGCS1-203ENST00000507004 SSTR2P30874 369 aa13.38□□□□□ -0.27
HMGCS1-203ENST00000507004 TNFRSF17Q02223 184 aa13.38□□□□□ -0.27
HMGCS1-203ENST00000507004 DDX39BQ13838 428 aaKnown RBP13.38□□□□□ -0.27
HMGCS1-203ENST00000507004 GTF2H2Q13888 395 aa13.38□□□□□ -0.27
HMGCS1-203ENST00000507004 PFKFB4Q16877 469 aa13.38□□□□□ -0.27
HMGCS1-203ENST00000507004 CMPK2Q5EBM0 449 aa13.38□□□□□ -0.27
HMGCS1-203ENST00000507004 GTF2H2CQ6P1K8 395 aa13.38□□□□□ -0.27
HMGCS1-203ENST00000507004 IL20RBQ6UXL0 311 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms