RNA–Protein interactions for RNA: ENST00000506556.1

THUMPD3P1-201, Transcript of THUMP domain containing 3 pseudogene 1, humanhuman

BASIC

Gene THUMPD3P1, Length 1,480 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3P1-201ENST00000506556 KRT222Q8N1A0 295 aa3.4□□□□□ -1.87
THUMPD3P1-201ENST00000506556 CNBD1Q8NA66 436 aa3.4□□□□□ -1.87
THUMPD3P1-201ENST00000506556 BHLHE23Q8NDY6 225 aa3.4□□□□□ -1.87
THUMPD3P1-201ENST00000506556 NCOA7Q8NI08 942 aa3.4□□□□□ -1.87
THUMPD3P1-201ENST00000506556 OCC1Q8TAD7 63 aa3.4□□□□□ -1.87
THUMPD3P1-201ENST00000506556 KIAA1143Q96AT1 154 aaPredicted RBP3.4□□□□□ -1.87
THUMPD3P1-201ENST00000506556 EEF2KMTQ96G04 330 aa3.4□□□□□ -1.87
THUMPD3P1-201ENST00000506556 ARL5BQ96KC2 179 aa3.4□□□□□ -1.87
THUMPD3P1-201ENST00000506556 PANX3Q96QZ0 392 aa3.4□□□□□ -1.87
THUMPD3P1-201ENST00000506556 URM1Q9BTM9 101 aaKnown RBP3.4□□□□□ -1.87
THUMPD3P1-201ENST00000506556 GTPBP2Q9BX10 602 aaKnown RBP3.4□□□□□ -1.87
THUMPD3P1-201ENST00000506556 PITPNM3Q9BZ71 974 aa3.4□□□□□ -1.87
THUMPD3P1-201ENST00000506556 LAT2Q9GZY6 243 aa3.4□□□□□ -1.87
THUMPD3P1-201ENST00000506556 DDX47Q9H0S4 455 aaKnown RBP3.4□□□□□ -1.87
THUMPD3P1-201ENST00000506556 PNNQ9H307 717 aaKnown RBP3.4□□□□□ -1.87
THUMPD3P1-201ENST00000506556 C8orf33Q9H7E9 229 aaPredicted RBP3.4□□□□□ -1.87
THUMPD3P1-201ENST00000506556 PELI2Q9HAT8 420 aa3.4□□□□□ -1.87
THUMPD3P1-201ENST00000506556 PARVGQ9HBI0 331 aa3.4□□□□□ -1.87
THUMPD3P1-201ENST00000506556 TMEM165Q9HC07 324 aa3.4□□□□□ -1.87
THUMPD3P1-201ENST00000506556 FARSBQ9NSD9 589 aaKnown RBP3.4□□□□□ -1.87
THUMPD3P1-201ENST00000506556 NDUFA13Q9P0J0 144 aa3.4□□□□□ -1.87
THUMPD3P1-201ENST00000506556 DAPK2Q9UIK4 370 aa3.4□□□□□ -1.87
THUMPD3P1-201ENST00000506556 TCF19Q9Y242 345 aa3.4□□□□□ -1.87
THUMPD3P1-201ENST00000506556 ARAP3Q8WWN8 1544 aa3.4□□□□□ -1.87
THUMPD3P1-201ENST00000506556 PCF11O94913 1555 aaKnown RBP3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 TEX14Q8IWB6 1497 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 WDR7Q9Y4E6 1490 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 A0A075B6Q4 140 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 TRBV2A0A0J9YWF9 115 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 DUXAA6NLW8 204 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 H0Y8G0 127 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 K7EQM0 130 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 PRRG1O14668 218 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 CTDSPLO15194 276 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 ATP6V0E1O15342 81 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 TEX28O15482 410 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 PCDH7O60245 1069 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 CTAG2O75638 210 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 ZNF432O94892 652 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 CSTAP01040 98 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 TSHBP01222 138 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 KRT8P05787 483 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 IQCF3P0C7M6 154 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 PLA2G4BP0C869 781 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 CALCBP10092 127 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 TROVE2P10155 538 aaKnown RBP eCLIP3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 RPA2P15927 270 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 ITGB6P18564 788 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 UGT1A6P19224 532 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 ATP6V1C1P21283 382 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 CA4P22748 312 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 ACP1P24666 158 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 ITGA3P26006 1051 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 CCND3P30281 292 aaPredicted RBP3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 PKLRP30613 574 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 CLCN4P51793 760 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 NAGLUP54802 743 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 AIF1P55008 147 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 PRMT2P55345 433 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 MAZP56270 477 aaKnown RBP3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 TGM3Q08188 693 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 SRSF5Q13243 272 aaKnown RBP3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 VEZF1Q14119 521 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 NPTX1Q15818 432 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 DCAF10Q5QP82 559 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 SPATA46Q5T0L3 261 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 LCE1AQ5T7P2 110 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 ARHGEF16Q5VV41 709 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 TTC19Q6DKK2 380 aaPredicted RBP3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 CASC4Q6P4E1 433 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 ERICH5Q6P6B1 374 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 ARSKQ6UWY0 536 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 RBMS3Q6XE24 437 aaKnown RBP3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 PIGWQ7Z7B1 504 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 PHLDB2Q86SQ0 1253 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 TRPT1Q86TN4 253 aaKnown RBP3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 ZDHHC21Q8IVQ6 265 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 CIARTQ8N365 385 aaPredicted RBP3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 LEMD2Q8NC56 503 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 TMEM185AQ8NFB2 350 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 STEAP2Q8NFT2 490 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 TRIM58Q8NG06 486 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 OR4K1Q8NGD4 311 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 OR2T3Q8NH03 318 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 DDI1Q8WTU0 396 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 DNAJA4Q8WW22 397 aaPredicted RBP3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 NT5C3BQ969T7 300 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 TMEM143Q96AN5 459 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 DHTKD1Q96HY7 919 aaPredicted RBP3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 RPRD1AQ96P16 312 aaPredicted RBP3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 ZNF607Q96SK3 696 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 NAP1L3Q99457 506 aaPredicted RBP3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 SSX3Q99909 188 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 CITED1Q99966 193 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 C19orf43Q9BQ61 176 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 UQCC2Q9BRT2 126 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 NSRP1Q9H0G5 558 aaKnown RBP3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 THAP2Q9H0W7 228 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 TRPV6Q9H1D0 765 aa3.39□□□□□ -1.87
THUMPD3P1-201ENST00000506556 SRD5A3Q9H8P0 318 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms