RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 ZNF24P17028 368 aa13.36□□□□□ -0.27
CDC42SE2-209ENST00000506419 CPN2P22792 545 aa13.36□□□□□ -0.27
CDC42SE2-209ENST00000506419 HK2P52789 917 aa13.36□□□□□ -0.27
CDC42SE2-209ENST00000506419 CASP6P55212 293 aa13.36□□□□□ -0.27
CDC42SE2-209ENST00000506419 RPS13P62277 151 aaKnown RBP13.36□□□□□ -0.27
CDC42SE2-209ENST00000506419 DDX39BQ13838 428 aaKnown RBP13.36□□□□□ -0.27
CDC42SE2-209ENST00000506419 RCN2Q14257 317 aa13.36□□□□□ -0.27
CDC42SE2-209ENST00000506419 PCBP2Q15366 365 aaKnown RBP eCLIP13.36□□□□□ -0.272e-6■■■■■ 27.5
CDC42SE2-209ENST00000506419 UAP1Q16222 522 aaPredicted RBP13.36□□□□□ -0.27
CDC42SE2-209ENST00000506419 ZNF750Q32MQ0 723 aa13.36□□□□□ -0.27
CDC42SE2-209ENST00000506419 CMPK2Q5EBM0 449 aa13.36□□□□□ -0.27
CDC42SE2-209ENST00000506419 C18orf63Q68DL7 685 aa13.36□□□□□ -0.27
CDC42SE2-209ENST00000506419 C8orf74Q6P047 294 aa13.36□□□□□ -0.27
CDC42SE2-209ENST00000506419 MTFR2Q6P444 385 aa13.36□□□□□ -0.27
CDC42SE2-209ENST00000506419 XKRXQ6PP77 449 aa13.36□□□□□ -0.27
CDC42SE2-209ENST00000506419 RPTNQ6XPR3 784 aa13.36□□□□□ -0.27
CDC42SE2-209ENST00000506419 C3P1Q6ZMU1 363 aa13.36□□□□□ -0.27
CDC42SE2-209ENST00000506419 RELL1Q8IUW5 271 aa13.36□□□□□ -0.27
CDC42SE2-209ENST00000506419 MMGT1Q8N4V1 131 aa13.36□□□□□ -0.27
CDC42SE2-209ENST00000506419 ZFP62Q8NB50 900 aaPredicted RBP13.36□□□□□ -0.27
CDC42SE2-209ENST00000506419 POGLUT1Q8NBL1 392 aa13.36□□□□□ -0.27
CDC42SE2-209ENST00000506419 NOA1Q8NC60 698 aaKnown RBP13.36□□□□□ -0.27
CDC42SE2-209ENST00000506419 OR52N2Q8NGI0 321 aa13.36□□□□□ -0.27
CDC42SE2-209ENST00000506419 ZNF721Q8TF20 911 aa13.36□□□□□ -0.27
CDC42SE2-209ENST00000506419 AGAP11Q8TF27 550 aa13.36□□□□□ -0.27
CDC42SE2-209ENST00000506419 DAZLQ92904 295 aaKnown RBP13.36□□□□□ -0.27
CDC42SE2-209ENST00000506419 MAGED4Q96JG8 741 aa13.36□□□□□ -0.27
CDC42SE2-209ENST00000506419 RASL10BQ96S79 203 aa13.36□□□□□ -0.27
CDC42SE2-209ENST00000506419 MTERF1Q99551 399 aaKnown RBP13.36□□□□□ -0.27
CDC42SE2-209ENST00000506419 ZNF717Q9BY31 904 aaPredicted RBP13.36□□□□□ -0.27
CDC42SE2-209ENST00000506419 FUT8Q9BYC5 575 aa13.36□□□□□ -0.27
CDC42SE2-209ENST00000506419 KLF13Q9Y2Y9 288 aaPredicted RBP13.36□□□□□ -0.27
CDC42SE2-209ENST00000506419 RNF11Q9Y3C5 154 aa13.36□□□□□ -0.27
CDC42SE2-209ENST00000506419 ATG4BQ9Y4P1 393 aa13.36□□□□□ -0.27
CDC42SE2-209ENST00000506419 ABCA12Q86UK0 2595 aa13.36□□□□□ -0.27
CDC42SE2-209ENST00000506419 AKAP9Q99996 3911 aa13.35□□□□□ -0.27
CDC42SE2-209ENST00000506419 A0A0G2JMM0 328 aa13.35□□□□□ -0.27
CDC42SE2-209ENST00000506419 A0A1B0GTH9 108 aa13.35□□□□□ -0.27
CDC42SE2-209ENST00000506419 A0A1W2PPB8 328 aa13.35□□□□□ -0.27
CDC42SE2-209ENST00000506419 A0A1W2PRS3 328 aa13.35□□□□□ -0.27
CDC42SE2-209ENST00000506419 SYCE1LA8MT33 242 aa13.35□□□□□ -0.27
CDC42SE2-209ENST00000506419 KIR3DP1A8MWS1 328 aa13.35□□□□□ -0.27
CDC42SE2-209ENST00000506419 C19orf84I3L1E1 186 aa13.35□□□□□ -0.27
CDC42SE2-209ENST00000506419 HRKO00198 91 aa13.35□□□□□ -0.27
CDC42SE2-209ENST00000506419 PLPP1O14494 284 aa13.35□□□□□ -0.27
CDC42SE2-209ENST00000506419 EEDO75530 441 aaKnown RBP13.35□□□□□ -0.27
CDC42SE2-209ENST00000506419 PRKRAO75569 313 aaKnown RBP13.35□□□□□ -0.27
CDC42SE2-209ENST00000506419 GFAPP14136 432 aa13.35□□□□□ -0.27
CDC42SE2-209ENST00000506419 TYK2P29597 1187 aa13.35□□□□□ -0.27
CDC42SE2-209ENST00000506419 SOX3P41225 446 aa13.35□□□□□ -0.27
CDC42SE2-209ENST00000506419 PIK3CBP42338 1070 aa13.35□□□□□ -0.27
CDC42SE2-209ENST00000506419 SSR2P43308 183 aa13.35□□□□□ -0.27
CDC42SE2-209ENST00000506419 NEK2P51955 445 aa13.35□□□□□ -0.27
CDC42SE2-209ENST00000506419 ALDH18A1P54886 795 aaKnown RBP13.35□□□□□ -0.27
CDC42SE2-209ENST00000506419 HNRNPH2P55795 449 aaKnown RBP13.35□□□□□ -0.27
CDC42SE2-209ENST00000506419 RNF4P78317 190 aa13.35□□□□□ -0.27
CDC42SE2-209ENST00000506419 IGLV3-21P80748 117 aaPredicted RBP13.35□□□□□ -0.27
CDC42SE2-209ENST00000506419 CKAP4Q07065 602 aaKnown RBP13.35□□□□□ -0.27
CDC42SE2-209ENST00000506419 SERTAD2Q14140 314 aa13.35□□□□□ -0.27
CDC42SE2-209ENST00000506419 LIPJQ5W064 366 aa13.35□□□□□ -0.27
CDC42SE2-209ENST00000506419 MRM1Q6IN84 353 aaKnown RBP13.35□□□□□ -0.27
CDC42SE2-209ENST00000506419 BNC2Q6ZN30 1099 aaPredicted RBP13.35□□□□□ -0.27
CDC42SE2-209ENST00000506419 GOLGA7Q7Z5G4 137 aa13.35□□□□□ -0.27
CDC42SE2-209ENST00000506419 OR14A16Q8NHC5 309 aa13.35□□□□□ -0.27
CDC42SE2-209ENST00000506419 SLC2A12Q8TD20 617 aa13.35□□□□□ -0.27
CDC42SE2-209ENST00000506419 RGMAQ96B86 450 aa13.35□□□□□ -0.27
CDC42SE2-209ENST00000506419 SENP5Q96HI0 755 aaPredicted RBP13.35□□□□□ -0.27
CDC42SE2-209ENST00000506419 DMRTA2Q96SC8 542 aa13.35□□□□□ -0.27
CDC42SE2-209ENST00000506419 DEFB127Q9H1M4 99 aa13.35□□□□□ -0.27
CDC42SE2-209ENST00000506419 VPS11Q9H270 941 aa13.35□□□□□ -0.27
CDC42SE2-209ENST00000506419 ACSS3Q9H6R3 686 aa13.35□□□□□ -0.27
CDC42SE2-209ENST00000506419 IPPKQ9H8X2 491 aa13.35□□□□□ -0.27
CDC42SE2-209ENST00000506419 DMRT3Q9NQL9 472 aa13.35□□□□□ -0.27
CDC42SE2-209ENST00000506419 ADGRE2Q9UHX3 823 aa13.35□□□□□ -0.27
CDC42SE2-209ENST00000506419 ERVK-11Q9UQG0 969 aa13.35□□□□□ -0.27
CDC42SE2-209ENST00000506419 TSC22D4Q9Y3Q8 395 aa13.35□□□□□ -0.27
CDC42SE2-209ENST00000506419 ASB4Q9Y574 426 aa13.35□□□□□ -0.27
CDC42SE2-209ENST00000506419 ANGPTL3Q9Y5C1 460 aa13.35□□□□□ -0.27
CDC42SE2-209ENST00000506419 DCHS2Q6V1P9 2916 aa13.34□□□□□ -0.27
CDC42SE2-209ENST00000506419 CCDC189A1A4V9 331 aa13.34□□□□□ -0.27
CDC42SE2-209ENST00000506419 A8MVJ9 347 aa13.34□□□□□ -0.27
CDC42SE2-209ENST00000506419 H0YIV9 168 aa13.34□□□□□ -0.27
CDC42SE2-209ENST00000506419 OR7A17O14581 309 aa13.34□□□□□ -0.27
CDC42SE2-209ENST00000506419 PROM1O43490 865 aa13.34□□□□□ -0.27
CDC42SE2-209ENST00000506419 PDE9AO76083 593 aa13.34□□□□□ -0.27
CDC42SE2-209ENST00000506419 ABOP16442 354 aa13.34□□□□□ -0.27
CDC42SE2-209ENST00000506419 AGAP20933 346 aa13.34□□□□□ -0.27
CDC42SE2-209ENST00000506419 PTX3P26022 381 aaPredicted RBP13.34□□□□□ -0.27
CDC42SE2-209ENST00000506419 ECHS1P30084 290 aa13.34□□□□□ -0.27
CDC42SE2-209ENST00000506419 SERPINB1P30740 379 aa13.34□□□□□ -0.27
CDC42SE2-209ENST00000506419 BSGP35613 385 aa13.34□□□□□ -0.27
CDC42SE2-209ENST00000506419 MAGEA12P43365 314 aa13.34□□□□□ -0.27
CDC42SE2-209ENST00000506419 STT3AP46977 705 aa13.34□□□□□ -0.27
CDC42SE2-209ENST00000506419 PIK3CGP48736 1102 aa13.34□□□□□ -0.27
CDC42SE2-209ENST00000506419 GTF2H2Q13888 395 aa13.34□□□□□ -0.27
CDC42SE2-209ENST00000506419 CPSF6Q16630 551 aaKnown RBP eCLIP13.34□□□□□ -0.27
CDC42SE2-209ENST00000506419 WHAMMP3Q1A5X7 153 aa13.34□□□□□ -0.27
CDC42SE2-209ENST00000506419 PIGGQ5H8A4 983 aa13.34□□□□□ -0.27
CDC42SE2-209ENST00000506419 GTF2H2CQ6P1K8 395 aa13.34□□□□□ -0.27
CDC42SE2-209ENST00000506419 CCDC91Q7Z6B0 441 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms