RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 DNAJC21Q5F1R6 531 aaKnown RBP2.97□□□□□ -1.93
TCOF1-208ENST00000506063 TCP11X2Q5H9J9 407 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 SIRPB2Q5JXA9 342 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 SLC22A10Q63ZE4 541 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 NCBP2-AS2Q69YL0 99 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 BICRALQ6AI39 1079 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 PPP1R2P3Q6NXS1 205 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 NXPE4Q6UWF7 544 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 RBM43Q6ZSC3 357 aaKnown RBP2.97□□□□□ -1.93
TCOF1-208ENST00000506063 C1QL2Q7Z5L3 287 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 LDB1Q86U70 411 aaPredicted RBP2.97□□□□□ -1.93
TCOF1-208ENST00000506063 PHF13Q86YI8 300 aaPredicted RBP2.97□□□□□ -1.93
TCOF1-208ENST00000506063 PLD3Q8IV08 490 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 DCUN1D3Q8IWE4 304 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 SLC22A15Q8IZD6 547 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 CNEP1R1Q8N9A8 125 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 PPHLN1Q8NEY8 458 aaKnown RBP2.97□□□□□ -1.93
TCOF1-208ENST00000506063 NEK11Q8NG66 645 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 OR10G3Q8NGC4 313 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 FAM110DQ8TAY7 271 aaPredicted RBP2.97□□□□□ -1.93
TCOF1-208ENST00000506063 RNF217Q8TC41 542 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 PIWIL2Q8TC59 973 aaKnown RBP2.97□□□□□ -1.93
TCOF1-208ENST00000506063 GTF3AQ92664 365 aaKnown RBP2.97□□□□□ -1.93
TCOF1-208ENST00000506063 TMEM186Q96B77 213 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 TM4SF19Q96DZ7 209 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 ZNF845Q96IR2 970 aaPredicted RBP2.97□□□□□ -1.93
TCOF1-208ENST00000506063 ZNF48Q96MX3 618 aaPredicted RBP2.97□□□□□ -1.93
TCOF1-208ENST00000506063 PTCHD1Q96NR3 888 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 GNRHR2Q96P88 292 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 SORCS2Q96PQ0 1159 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 TBX15Q96SF7 602 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 SELENOOQ9BVL4 669 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 CEP41Q9BYV8 373 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 OR10A4Q9H209 315 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 NDST4Q9H3R1 872 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 TRABDQ9H4I3 376 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 FAM96AQ9H5X1 160 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 G6PC2Q9NQR9 355 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 EIF2B3Q9NR50 452 aaKnown RBP2.97□□□□□ -1.93
TCOF1-208ENST00000506063 DDX28Q9NUL7 540 aaKnown RBP2.97□□□□□ -1.93
TCOF1-208ENST00000506063 LMBRD1Q9NUN5 540 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 NECAP2Q9NVZ3 263 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 HIF1ANQ9NWT6 349 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 TAB2Q9NYJ8 693 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 UBP1Q9NZI7 540 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 AIPL1Q9NZN9 384 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 PCYOX1Q9UHG3 505 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 ZDHHC2Q9UIJ5 367 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 FKBPLQ9UIM3 349 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 TTC7AQ9ULT0 858 aaPredicted RBP2.97□□□□□ -1.93
TCOF1-208ENST00000506063 MOKQ9UQ07 419 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 C15orf41Q9Y2V0 281 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 ARL5AQ9Y689 179 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 KMT2AQ03164 3969 aa2.96□□□□□ -1.93
TCOF1-208ENST00000506063 KCNE1BA0A087WTH5 132 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 ESYT3A0FGR9 886 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 SYCE3A1L190 88 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 ANKRD33BA6NCL7 494 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 F8VZ95 297 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 H0Y3Z8 333 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 CLDN34H7C241 214 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 CCL22O00626 93 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 TXNDC9O14530 226 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 CHST10O43529 356 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 GALR3O60755 368 aaPredicted RBP2.96□□□□□ -1.94
TCOF1-208ENST00000506063 ULK1O75385 1050 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 VPS26AO75436 327 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 TRAPPC6AO75865 159 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 KNG1P01042 644 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 OPN1MWP04001 364 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 CYP1A2P05177 515 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 OPN1MW2P0DN77 364 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 OPN1MW3P0DN78 364 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 EZRP15311 586 aaKnown RBP2.96□□□□□ -1.94
TCOF1-208ENST00000506063 ZNF708P17019 499 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 PCMT1P22061 227 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 ACRV1P26436 265 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 ADH6P28332 368 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 SERPINB6P35237 376 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 ARL4AP40617 200 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 NSFP46459 744 aaKnown RBP2.96□□□□□ -1.94
TCOF1-208ENST00000506063 RPL21P46778 160 aaKnown RBP2.96□□□□□ -1.94
TCOF1-208ENST00000506063 KCNJ5P48544 419 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 STARP49675 285 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 CDH11P55287 796 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 OLR1P78380 273 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 IFI35P80217 286 aaPredicted RBP2.96□□□□□ -1.94
TCOF1-208ENST00000506063 IRF9Q00978 393 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 CDR2Q01850 454 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 PLOD1Q02809 727 aaPredicted RBP2.96□□□□□ -1.94
TCOF1-208ENST00000506063 UBXN1Q04323 297 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 SRYQ05066 204 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 SPOCK1Q08629 439 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 SCGB2A2Q13296 93 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 KRT81Q14533 505 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 PAFAH1B3Q15102 231 aaKnown RBP2.96□□□□□ -1.94
TCOF1-208ENST00000506063 KRT31Q15323 416 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 TRIP10Q15642 601 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 TSC22D1Q15714 1073 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 TAF9Q16594 264 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms