RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 SKP1P63208 163 aa12.2□□□□□ -0.46
DDX41-204ENST00000504807 PCDH1Q08174 1060 aa12.2□□□□□ -0.46
DDX41-204ENST00000504807 FOXD4Q12950 439 aaPredicted RBP12.2□□□□□ -0.46
DDX41-204ENST00000504807 TERF2Q15554 542 aa12.2□□□□□ -0.46
DDX41-204ENST00000504807 TRIM40Q6P9F5 258 aa12.2□□□□□ -0.46
DDX41-204ENST00000504807 RAPH1Q70E73 1250 aa12.2□□□□□ -0.46
DDX41-204ENST00000504807 PRIMA1Q86XR5 153 aa12.2□□□□□ -0.46
DDX41-204ENST00000504807 SPPL2CQ8IUH8 684 aa12.2□□□□□ -0.46
DDX41-204ENST00000504807 ZNF595Q8IYB9 648 aa12.2□□□□□ -0.46
DDX41-204ENST00000504807 MARVELD2Q8N4S9 558 aa12.2□□□□□ -0.46
DDX41-204ENST00000504807 ACOT4Q8N9L9 421 aa12.2□□□□□ -0.46
DDX41-204ENST00000504807 TMEM178AQ8NBL3 297 aa12.2□□□□□ -0.46
DDX41-204ENST00000504807 SPATA3Q8NHX4 192 aa12.2□□□□□ -0.46
DDX41-204ENST00000504807 NRGNQ92686 78 aa12.2□□□□□ -0.46
DDX41-204ENST00000504807 SPOCK3Q9BQ16 436 aa12.2□□□□□ -0.46
DDX41-204ENST00000504807 CNOT10Q9H9A5 744 aaKnown RBP12.2□□□□□ -0.46
DDX41-204ENST00000504807 FBXW2Q9UKT8 454 aa12.2□□□□□ -0.46
DDX41-204ENST00000504807 ABCA4P78363 2273 aa12.2□□□□□ -0.46
DDX41-204ENST00000504807 G3V3Y1 287 aa12.19□□□□□ -0.46
DDX41-204ENST00000504807 K7EPI3 171 aa12.19□□□□□ -0.46
DDX41-204ENST00000504807 WWP2O00308 870 aa12.19□□□□□ -0.46
DDX41-204ENST00000504807 PLPP1O14494 284 aa12.19□□□□□ -0.46
DDX41-204ENST00000504807 PEX1O43933 1283 aa12.19□□□□□ -0.46
DDX41-204ENST00000504807 KLK8O60259 260 aa12.19□□□□□ -0.46
DDX41-204ENST00000504807 CTNSO60931 367 aa12.19□□□□□ -0.46
DDX41-204ENST00000504807 GSTM2P28161 218 aa12.19□□□□□ -0.46
DDX41-204ENST00000504807 DNAJA1P31689 397 aaKnown RBP12.19□□□□□ -0.46
DDX41-204ENST00000504807 STX2P32856 288 aa12.19□□□□□ -0.46
DDX41-204ENST00000504807 CLCN2P51788 898 aa12.19□□□□□ -0.46
DDX41-204ENST00000504807 HNRNPH2P55795 449 aaKnown RBP12.19□□□□□ -0.46
DDX41-204ENST00000504807 SETDB1Q15047 1291 aa12.19□□□□□ -0.46
DDX41-204ENST00000504807 CMPK2Q5EBM0 449 aa12.19□□□□□ -0.46
DDX41-204ENST00000504807 C18orf63Q68DL7 685 aa12.19□□□□□ -0.46
DDX41-204ENST00000504807 MEX3BQ6ZN04 569 aaKnown RBP12.19□□□□□ -0.46
DDX41-204ENST00000504807 DOLPP1Q86YN1 238 aa12.19□□□□□ -0.46
DDX41-204ENST00000504807 RPRMLQ8N4K4 120 aa12.19□□□□□ -0.46
DDX41-204ENST00000504807 TEX9Q8N6V9 391 aa12.19□□□□□ -0.46
DDX41-204ENST00000504807 OR52N2Q8NGI0 321 aa12.19□□□□□ -0.46
DDX41-204ENST00000504807 HUS1BQ8NHY5 278 aa12.19□□□□□ -0.46
DDX41-204ENST00000504807 STAG3L4Q8TBR4 150 aa12.19□□□□□ -0.46
DDX41-204ENST00000504807 PPWD1Q96BP3 646 aaKnown RBP12.19□□□□□ -0.46
DDX41-204ENST00000504807 VMP1Q96GC9 406 aa12.19□□□□□ -0.46
DDX41-204ENST00000504807 SEC16BQ96JE7 1060 aa12.19□□□□□ -0.46
DDX41-204ENST00000504807 CAPS2Q9BXY5 557 aa12.19□□□□□ -0.46
DDX41-204ENST00000504807 ALOXE3Q9BYJ1 711 aa12.19□□□□□ -0.46
DDX41-204ENST00000504807 PITHD1Q9GZP4 211 aaPredicted RBP12.19□□□□□ -0.46
DDX41-204ENST00000504807 RAB17Q9H0T7 212 aa12.19□□□□□ -0.46
DDX41-204ENST00000504807 NMRAL1Q9HBL8 299 aa12.19□□□□□ -0.46
DDX41-204ENST00000504807 ADAP2Q9NPF8 381 aa12.19□□□□□ -0.46
DDX41-204ENST00000504807 MEMO1Q9Y316 297 aa12.19□□□□□ -0.46
DDX41-204ENST00000504807 TMPRSS11DO60235 418 aa12.18□□□□□ -0.46
DDX41-204ENST00000504807 HS6ST1O60243 411 aa12.18□□□□□ -0.46
DDX41-204ENST00000504807 EEDO75530 441 aaKnown RBP12.18□□□□□ -0.46
DDX41-204ENST00000504807 CLDN14O95500 239 aa12.18□□□□□ -0.46
DDX41-204ENST00000504807 ZNF24P17028 368 aa12.18□□□□□ -0.46
DDX41-204ENST00000504807 HIST1H1TP22492 207 aaPredicted RBP12.18□□□□□ -0.46
DDX41-204ENST00000504807 CRABP2P29373 138 aa12.18□□□□□ -0.46
DDX41-204ENST00000504807 SOX3P41225 446 aa12.18□□□□□ -0.46
DDX41-204ENST00000504807 PIK3CGP48736 1102 aa12.18□□□□□ -0.46
DDX41-204ENST00000504807 NEK2P51955 445 aa12.18□□□□□ -0.46
DDX41-204ENST00000504807 HK2P52789 917 aa12.18□□□□□ -0.46
DDX41-204ENST00000504807 IGLV3-21P80748 117 aaPredicted RBP12.18□□□□□ -0.46
DDX41-204ENST00000504807 CAV1Q03135 178 aa12.18□□□□□ -0.46
DDX41-204ENST00000504807 DDX39BQ13838 428 aaKnown RBP12.18□□□□□ -0.46
DDX41-204ENST00000504807 ELAVL1Q15717 326 aaKnown RBP12.18□□□□□ -0.46
DDX41-204ENST00000504807 PFKFB4Q16877 469 aa12.18□□□□□ -0.46
DDX41-204ENST00000504807 TECRLQ5HYJ1 363 aa12.18□□□□□ -0.46
DDX41-204ENST00000504807 KHDRBS2Q5VWX1 349 aaKnown RBP12.18□□□□□ -0.46
DDX41-204ENST00000504807 GRHL2Q6ISB3 625 aa12.18□□□□□ -0.46
DDX41-204ENST00000504807 MED27Q6P2C8 311 aa12.18□□□□□ -0.46
DDX41-204ENST00000504807 ADGRD1Q6QNK2 874 aa12.18□□□□□ -0.46
DDX41-204ENST00000504807 RPS27LQ71UM5 84 aaKnown RBP12.18□□□□□ -0.46
DDX41-204ENST00000504807 CXXC5Q7LFL8 322 aaKnown RBP12.18□□□□□ -0.46
DDX41-204ENST00000504807 TBC1D1Q86TI0 1168 aaPredicted RBP12.18□□□□□ -0.46
DDX41-204ENST00000504807 CYP4Z2PQ8N1L4 340 aa12.18□□□□□ -0.46
DDX41-204ENST00000504807 ZNF721Q8TF20 911 aa12.18□□□□□ -0.46
DDX41-204ENST00000504807 AGAP11Q8TF27 550 aa12.18□□□□□ -0.46
DDX41-204ENST00000504807 C16orf45Q96MC5 204 aaPredicted RBP12.18□□□□□ -0.46
DDX41-204ENST00000504807 NSUN5Q96P11 429 aaKnown RBP12.18□□□□□ -0.46
DDX41-204ENST00000504807 KCNC2Q96PR1 638 aa12.18□□□□□ -0.46
DDX41-204ENST00000504807 CDK15Q96Q40 435 aa12.18□□□□□ -0.46
DDX41-204ENST00000504807 RASL10BQ96S79 203 aa12.18□□□□□ -0.46
DDX41-204ENST00000504807 DMRTA2Q96SC8 542 aa12.18□□□□□ -0.46
DDX41-204ENST00000504807 MTERF1Q99551 399 aaKnown RBP12.18□□□□□ -0.46
DDX41-204ENST00000504807 SMR3AQ99954 134 aa12.18□□□□□ -0.46
DDX41-204ENST00000504807 LYRM4Q9HD34 91 aa12.18□□□□□ -0.46
DDX41-204ENST00000504807 DMRT3Q9NQL9 472 aa12.18□□□□□ -0.46
DDX41-204ENST00000504807 DLL4Q9NR61 685 aa12.18□□□□□ -0.46
DDX41-204ENST00000504807 OPTCQ9UBM4 332 aa12.18□□□□□ -0.46
DDX41-204ENST00000504807 VTI1BQ9UEU0 232 aa12.18□□□□□ -0.46
DDX41-204ENST00000504807 RPH3AQ9Y2J0 694 aaPredicted RBP12.18□□□□□ -0.46
DDX41-204ENST00000504807 ACOT9Q9Y305 439 aa12.18□□□□□ -0.46
DDX41-204ENST00000504807 ATG4BQ9Y4P1 393 aa12.18□□□□□ -0.46
DDX41-204ENST00000504807 A0A096LPK6 155 aa12.17□□□□□ -0.46
DDX41-204ENST00000504807 A0A1B0GTH9 108 aa12.17□□□□□ -0.46
DDX41-204ENST00000504807 C17orf105B2RV13 164 aa12.17□□□□□ -0.46
DDX41-204ENST00000504807 OR7A17O14581 309 aa12.17□□□□□ -0.46
DDX41-204ENST00000504807 CLPSP04118 112 aa12.17□□□□□ -0.46
DDX41-204ENST00000504807 S100BP04271 92 aaPredicted RBP12.17□□□□□ -0.46
DDX41-204ENST00000504807 IFNA16P05015 189 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms