RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 SERINC5Q86VE9 423 aa3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 NUDT13Q86X67 352 aa3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 CIR1Q86X95 450 aaPredicted RBP3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 KRT73Q86Y46 540 aa3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 DENND1CQ8IV53 801 aa3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 CDK20Q8IZL9 346 aa3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 PNPLA1Q8N8W4 532 aa3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 C17orf47Q8NEP4 570 aa3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 OR4K2Q8NGD2 314 aa3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 OR9A2Q8NGT5 310 aa3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 PHOSPHO1Q8TCT1 267 aa3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 HAS2Q92819 552 aa3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 CRELD1Q96HD1 420 aa3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 DIRAS2Q96HU8 199 aa3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 NEDD4LQ96PU5 975 aa3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 CPPED1Q9BRF8 314 aaPredicted RBP3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 BEX2Q9BXY8 128 aa3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 PRKD2Q9BZL6 878 aa3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 CHIAQ9BZP6 476 aa3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 NXF2Q9GZY0 626 aaKnown RBP3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 BTBD1Q9H0C5 482 aa3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 ABHD16BQ9H3Z7 469 aa3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 ZDHHC6Q9H6R6 413 aa3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 BEX1Q9HBH7 125 aa3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 PDP1Q9P0J1 537 aaPredicted RBP3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 PSME2Q9UL46 239 aa3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 GSTK1Q9Y2Q3 226 aa3.53□□□□□ -1.85
PCDH11X-208ENST00000504220 TICRRQ7Z2Z1 1910 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 PLIN4Q96Q06 1357 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 A0A075B6Q4 140 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 A0A0G2JN53 185 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 BLACEA4D250 179 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 SLC15A5A6NIM6 579 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 FGF19O95750 216 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 CBX7O95931 251 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 CCNE2O96020 404 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 CFDP00746 253 aaPredicted RBP3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 IL1BP01584 269 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 INHAP05111 366 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 DBIP07108 87 aaKnown RBP3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 ANXA5P08758 320 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 ABHD2P08910 425 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 CTXN2P0C2S0 81 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 ARF4P18085 180 aaPredicted RBP3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 NMBRP28336 390 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 FMO3P31513 532 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 SCNN1AP37088 669 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 NUP62P37198 522 aaPredicted RBP3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 CDKN2BP42772 138 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 HSPA7P48741 367 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 STARP49675 285 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 TMEM33P57088 247 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 IRF9Q00978 393 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 RGS1Q08116 209 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 SPIRE1Q08AE8 756 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 SCRN3Q0VDG4 424 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 LMAN2Q12907 356 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 NOMO1Q15155 1222 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 PON3Q15166 354 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 PCBP2Q15366 365 aaKnown RBP eCLIP3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 SEC23BQ15437 767 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 MICAQ29983 383 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 CRTC2Q53ET0 693 aaPredicted RBP3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 GPAT3Q53EU6 434 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 XKR6Q5GH73 641 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 NOMO2Q5JPE7 1267 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 GARNL3Q5VVW2 1013 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 FBXW9Q5XUX1 488 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 GPR139Q6DWJ6 353 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 CXorf57Q6NSI4 855 aaKnown RBP3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 ERICH5Q6P6B1 374 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 TEX261Q6UWH6 196 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 PTCHD4Q6ZW05 846 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 USP45Q70EL2 814 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 CTU1Q7Z7A3 348 aaKnown RBP3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 KIAA0907Q7Z7F0 614 aaPredicted RBP3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 FSTL5Q8N475 847 aaPredicted RBP3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 CLRN3Q8NCR9 226 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 OR6M1Q8NGM8 313 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 PCDH19Q8TAB3 1148 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 CLEC4CQ8WTT0 213 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 PTERQ96BW5 349 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 FAM122AQ96E09 287 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 RHOVQ96L33 236 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 ZFP3Q96NJ6 502 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 CDK15Q96Q40 435 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 RBP7Q96R05 134 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 MRPL57Q9BQC6 102 aaKnown RBP3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 CCDC3Q9BQI4 270 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 PDCD10Q9BUL8 212 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 UCK2Q9BZX2 261 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 PDE7BQ9NP56 450 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 TMPRSS4Q9NRS4 437 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 DNAJB11Q9UBS4 358 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 RAPGEFL1Q9UHV5 662 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 LGALS13Q9UHV8 139 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 ITGA11Q9UKX5 1188 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 U3KQ87 197 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 SLC35F4A4IF30 521 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 NPEPPSL1A6NEC2 478 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms