RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 AP5B1Q2VPB7 878 aa15.1■□□□□ 0.01
SCLT1-204ENST00000503215 TMEM35AQ53FP2 167 aa15.1■□□□□ 0.01
SCLT1-204ENST00000503215 C18orf63Q68DL7 685 aa15.1■□□□□ 0.01
SCLT1-204ENST00000503215 GRHL2Q6ISB3 625 aa15.1■□□□□ 0.01
SCLT1-204ENST00000503215 MYLK4Q86YV6 388 aaPredicted RBP15.1■□□□□ 0.01
SCLT1-204ENST00000503215 SLC34A3Q8N130 599 aa15.1■□□□□ 0.01
SCLT1-204ENST00000503215 NOA1Q8NC60 698 aaKnown RBP15.1■□□□□ 0.01
SCLT1-204ENST00000503215 AGAP11Q8TF27 550 aa15.1■□□□□ 0.01
SCLT1-204ENST00000503215 UCN3Q969E3 161 aa15.1■□□□□ 0.01
SCLT1-204ENST00000503215 CCDC77Q9BR77 488 aa15.1■□□□□ 0.01
SCLT1-204ENST00000503215 DMRT3Q9NQL9 472 aa15.1■□□□□ 0.01
SCLT1-204ENST00000503215 MYOTQ9UBF9 498 aa15.1■□□□□ 0.01
SCLT1-204ENST00000503215 YARS2Q9Y2Z4 477 aaKnown RBP15.1■□□□□ 0.01
SCLT1-204ENST00000503215 NCOA6Q14686 2063 aaPredicted RBP15.09■□□□□ 0.01
SCLT1-204ENST00000503215 G3V3Y1 287 aa15.09■□□□□ 0.01
SCLT1-204ENST00000503215 C19orf84I3L1E1 186 aa15.09■□□□□ 0.01
SCLT1-204ENST00000503215 HRKO00198 91 aa15.09■□□□□ 0.01
SCLT1-204ENST00000503215 PLPP1O14494 284 aa15.09■□□□□ 0.01
SCLT1-204ENST00000503215 KLK8O60259 260 aa15.09■□□□□ 0.01
SCLT1-204ENST00000503215 PDE9AO76083 593 aa15.09■□□□□ 0.01
SCLT1-204ENST00000503215 KLHL2O95198 593 aa15.09■□□□□ 0.01
SCLT1-204ENST00000503215 ESRRAP11474 423 aaPredicted RBP15.09■□□□□ 0.01
SCLT1-204ENST00000503215 GFAPP14136 432 aa15.09■□□□□ 0.01
SCLT1-204ENST00000503215 ABOP16442 354 aa15.09■□□□□ 0.01
SCLT1-204ENST00000503215 TNNI3P19429 210 aa15.09■□□□□ 0.01
SCLT1-204ENST00000503215 CPN2P22792 545 aa15.09■□□□□ 0.01
SCLT1-204ENST00000503215 SSR2P43308 183 aa15.09■□□□□ 0.01
SCLT1-204ENST00000503215 PIK3CGP48736 1102 aa15.09■□□□□ 0.01
SCLT1-204ENST00000503215 SSR4P51571 173 aa15.09■□□□□ 0.01
SCLT1-204ENST00000503215 NEK2P51955 445 aa15.09■□□□□ 0.01
SCLT1-204ENST00000503215 HK2P52789 917 aa15.09■□□□□ 0.01
SCLT1-204ENST00000503215 HNRNPH2P55795 449 aaKnown RBP15.09■□□□□ 0.01
SCLT1-204ENST00000503215 RPS13P62277 151 aaKnown RBP15.09■□□□□ 0.01
SCLT1-204ENST00000503215 CKAP4Q07065 602 aaKnown RBP15.09■□□□□ 0.01
SCLT1-204ENST00000503215 FAM83EQ2M2I3 478 aa15.09■□□□□ 0.01
SCLT1-204ENST00000503215 ZNF750Q32MQ0 723 aa15.09■□□□□ 0.01
SCLT1-204ENST00000503215 CMPK2Q5EBM0 449 aa15.09■□□□□ 0.01
SCLT1-204ENST00000503215 FAM219BQ5XKK7 198 aa15.09■□□□□ 0.01
SCLT1-204ENST00000503215 OR4C11Q6IEV9 310 aa15.09■□□□□ 0.01
SCLT1-204ENST00000503215 IL20RBQ6UXL0 311 aa15.09■□□□□ 0.01
SCLT1-204ENST00000503215 HSDL2Q6YN16 418 aa15.09■□□□□ 0.01
SCLT1-204ENST00000503215 CHSY3Q70JA7 882 aa15.09■□□□□ 0.01
SCLT1-204ENST00000503215 TICAM1Q8IUC6 712 aa15.09■□□□□ 0.01
SCLT1-204ENST00000503215 GHDCQ8N2G8 530 aa15.09■□□□□ 0.01
SCLT1-204ENST00000503215 SRFBP1Q8NEF9 429 aaKnown RBP15.09■□□□□ 0.01
SCLT1-204ENST00000503215 OR52N2Q8NGI0 321 aa15.09■□□□□ 0.01
SCLT1-204ENST00000503215 RHEBL1Q8TAI7 183 aa15.09■□□□□ 0.01
SCLT1-204ENST00000503215 SLC2A12Q8TD20 617 aa15.09■□□□□ 0.01
SCLT1-204ENST00000503215 UBE2E3Q969T4 207 aa15.09■□□□□ 0.01
SCLT1-204ENST00000503215 PPWD1Q96BP3 646 aaKnown RBP15.09■□□□□ 0.01
SCLT1-204ENST00000503215 CMTM7Q96FZ5 175 aa15.09■□□□□ 0.01
SCLT1-204ENST00000503215 RASL10BQ96S79 203 aa15.09■□□□□ 0.01
SCLT1-204ENST00000503215 ZNF717Q9BY31 904 aaPredicted RBP15.09■□□□□ 0.01
SCLT1-204ENST00000503215 VPS11Q9H270 941 aa15.09■□□□□ 0.01
SCLT1-204ENST00000503215 CPSF2Q9P2I0 782 aaKnown RBP15.09■□□□□ 0.01
SCLT1-204ENST00000503215 ERVK-11Q9UQG0 969 aa15.09■□□□□ 0.01
SCLT1-204ENST00000503215 RNF11Q9Y3C5 154 aa15.09■□□□□ 0.01
SCLT1-204ENST00000503215 ATG4BQ9Y4P1 393 aa15.09■□□□□ 0.01
SCLT1-204ENST00000503215 FBN2P35556 2912 aa15.08■□□□□ 0.01
SCLT1-204ENST00000503215 A0A1B0GTH9 108 aa15.08■□□□□ 0
SCLT1-204ENST00000503215 SYCE1LA8MT33 242 aa15.08■□□□□ 0
SCLT1-204ENST00000503215 KLRC4-KLRK1H3BQV0 150 aa15.08■□□□□ 0
SCLT1-204ENST00000503215 EEDO75530 441 aaKnown RBP15.08■□□□□ 0
SCLT1-204ENST00000503215 ACSL3O95573 720 aa15.08■□□□□ 0
SCLT1-204ENST00000503215 MLYCDO95822 493 aa15.08■□□□□ 0
SCLT1-204ENST00000503215 TYK2P29597 1187 aa15.08■□□□□ 0
SCLT1-204ENST00000503215 ALDH18A1P54886 795 aaKnown RBP15.08■□□□□ 0
SCLT1-204ENST00000503215 RCN2Q14257 317 aa15.08■□□□□ 0
SCLT1-204ENST00000503215 ACAP2Q15057 778 aa15.08■□□□□ 0
SCLT1-204ENST00000503215 CPSF6Q16630 551 aaKnown RBP eCLIP15.08■□□□□ 0
SCLT1-204ENST00000503215 ZNF630Q2M218 657 aaPredicted RBP15.08■□□□□ 0
SCLT1-204ENST00000503215 RPTNQ6XPR3 784 aa15.08■□□□□ 0
SCLT1-204ENST00000503215 BNC2Q6ZN30 1099 aaPredicted RBP15.08■□□□□ 0
SCLT1-204ENST00000503215 GOLGA7Q7Z5G4 137 aa15.08■□□□□ 0
SCLT1-204ENST00000503215 ZFP62Q8NB50 900 aaPredicted RBP15.08■□□□□ 0
SCLT1-204ENST00000503215 MORN4Q8NDC4 146 aa15.08■□□□□ 0
SCLT1-204ENST00000503215 OR14A16Q8NHC5 309 aa15.08■□□□□ 0
SCLT1-204ENST00000503215 C16orf52Q8NHV5 167 aa15.08■□□□□ 0
SCLT1-204ENST00000503215 ZNF721Q8TF20 911 aa15.08■□□□□ 0
SCLT1-204ENST00000503215 ASB15Q8WXK1 588 aa15.08■□□□□ 0
SCLT1-204ENST00000503215 DAZLQ92904 295 aaKnown RBP15.08■□□□□ 0
SCLT1-204ENST00000503215 CDK15Q96Q40 435 aa15.08■□□□□ 0
SCLT1-204ENST00000503215 ROGDIQ9GZN7 287 aa15.08■□□□□ 0
SCLT1-204ENST00000503215 ACSS3Q9H6R3 686 aa15.08■□□□□ 0
SCLT1-204ENST00000503215 ACTR8Q9H981 624 aa15.08■□□□□ 0
SCLT1-204ENST00000503215 ANGPTL3Q9Y5C1 460 aa15.08■□□□□ 0
SCLT1-204ENST00000503215 KLF2Q9Y5W3 355 aaPredicted RBP15.08■□□□□ 0
SCLT1-204ENST00000503215 ZNF407Q9C0G0 2248 aa15.07■□□□□ 0
SCLT1-204ENST00000503215 A8MVJ9 347 aa15.07■□□□□ 0
SCLT1-204ENST00000503215 TFECO14948 347 aaPredicted RBP15.07■□□□□ 0
SCLT1-204ENST00000503215 TMPRSS11DO60235 418 aa15.07■□□□□ 0
SCLT1-204ENST00000503215 CDC40O60508 579 aaKnown RBP eCLIP15.07■□□□□ 0
SCLT1-204ENST00000503215 PIK3CBP42338 1070 aa15.07■□□□□ 0
SCLT1-204ENST00000503215 RNF4P78317 190 aa15.07■□□□□ 0
SCLT1-204ENST00000503215 IGLV3-21P80748 117 aaPredicted RBP15.07■□□□□ 0
SCLT1-204ENST00000503215 GTF2H2Q13888 395 aa15.07■□□□□ 0
SCLT1-204ENST00000503215 PCBP2Q15366 365 aaKnown RBP eCLIP15.07■□□□□ 05e-10■■■■□ 21.4
SCLT1-204ENST00000503215 TECRLQ5HYJ1 363 aa15.07■□□□□ 0
SCLT1-204ENST00000503215 GTF2H2CQ6P1K8 395 aa15.07■□□□□ 0
SCLT1-204ENST00000503215 MTFR2Q6P444 385 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms